Orthologous genes in OrthoFinder**

Species Gene Description
 hsa-u.4   PRPF3   pre-mRNA processing factor 3 
 hsa-r.6   PRPF3   pre-mRNA processing factor 3 
 hsa-m.7   PRPF3   pre-mRNA processing factor 3 
 hsa-m2.4   PRPF3   pre-mRNA processing factor 3 
 mcc-u.3   PRPF3   pre-mRNA processing factor 3 
 mmu-u.4   Prpf3   pre-mRNA processing factor 3 
 rno-u.3   Prpf3   pre-mRNA processing factor 3 
 cfa-u.3   PRPF3   pre-mRNA processing factor 3 
 gga-u.3   PRPF3   pre-mRNA processing factor 3 
 dre-u.3   prpf3   PRP3 pre-mRNA processing factor 3 homolog (yeast) 
 dme-u.3   Prp3   Precursor RNA processing 3 
 cel-u.3   prp-3   uncharacterized protein 
 sce-u.3   PRP3   U4/U6-U5 snRNP complex subunit PRP3 

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Top 50 coexpressed genes to PRPF3 (hsa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 hsa3040   Spliceosome  4 126 3.26
 hsa3015   mRNA surveillance pathway  3 82 2.72
 hsa3013   Nucleocytoplasmic transport  3 96 2.52
 hsa3008   Ribosome biogenesis in eukaryotes  2 109 -
 hsa5014   Amyotrophic lateral sclerosis  3 364 -

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hsa:PRPF3 (pre-mRNA processing factor 3) External Links;


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Show Coexpressed Genes
UMAP
Gene Function KEGG Entrez
Gene
ID		 Other ID CoexPub LINK Target Reference

hsa-u.4
for
PRPF3
hsa-r.6
for
PRPF3
hsa-m.7
for
PRPF3
hsa-m2.4
for
PRPF3
mcc-u.3
for
PRPF3
mmu-u.4
for
Prpf3
rno-u.3
for
Prpf3
cfa-u.3
for
PRPF3
gga-u.3
for
PRPF3
dre-u.3
for
prpf3
dme-u.3
for
Prp3
cel-u.3
for
prp-3
sce-u.3
for
PRP3
1 UBAP2L ubiquitin associated protein 2 like 9898 0 8.5 9.4
 3.8
 5.4
 5.2
2.2
 5.6
2.5
 2.1
1.5
 3.0
1.4
 3.6
2.2
 1.4
0.8
 1.1
 2.3
2 FUBP1 far upstream element binding protein 1 8880 0 8.1 8.3
 1.8
 6.0
 1.7
1.2
 5.2
2.5
 4.1
2.5
 4.5
-0.1
 3.2
1.7
 2.8
2.3
 2.1
 2.9
1.8
3 KHDC4 KH domain containing 4, pre-mRNA splicing factor 22889 0 8.0 5.9
 3.3
 8.2
 1.9
 3.1
 4.8
 4.6
 3.0
 0.5


4 GON4L gon-4 like 54856 0 7.7 6.4
 2.9
 7.1
 4.4
1.5
 4.5
 1.1
 4.2
 0.9
 2.6
1.9
 2.2
 3.3
5 NVL nuclear VCP like 4931 0 7.4 7.4
 2.6
 5.7
 4.5
 3.8
 4.2
 0.3
 2.0
 0.7
 2.9
 1.6
 -0.2
6 CHTOP chromatin target of PRMT1 26097 0 7.3 4.0
 4.2
 8.9
 3.3
 2.5
 1.2
1.1
 2.2
 3.8
 1.5


7 CLK2 CDC like kinase 2 1196 0 7.3 6.4
 3.3
 6.4
 3.3
3.2
 3.0
2.9
 4.6
4.2
 3.4
1.7
 4.2
3.4
 0.2
-0.5
 0.4
 0.6
 0.4
8 SETDB1 SET domain bifurcated histone lysine methyltransferase 1 9869 1 7.1 6.2
 3.9
 6.2
 4.9
 5.5
 2.9
 5.1
 3.7
 3.0
2.4
 2.2

9 SRRT serrate, RNA effector molecule 51593 0 7.0 6.3
 3.2
 6.0
 5.1
 7.6
 6.0
 3.0
2.4
 4.4
 5.0
10 SFSWAP splicing factor SWAP 6433 0 6.8 6.6
 1.3
 5.4
 2.9
 2.5
 3.0
 3.4
 1.0
 -0.1
 1.8
 3.4
11 POLR3C RNA polymerase III subunit C 10623 0 6.7 6.9
 1.8
 4.9
 3.3
 2.5
 1.4
 4.3
 0.2
 1.9
 1.9
 2.4
 -1.1
12 LUC7L LUC7 like 55692 0 6.7 5.1
 3.3
 6.7
 2.2
2.0
 6.0
1.6
 6.6
3.2
 4.3
3.3
 3.4
1.8
 2.3
1.2
 4.3
 4.5
 -0.3
13 DDX55 DEAD-box helicase 55 57696 0 6.6 5.8
 2.5
 5.8
 3.1
 5.4
 4.4
 3.9
 0.6
 3.0
 1.6
 3.3
 2.0
14 PNN pinin, desmosome associated protein 5411 0 6.4 4.9
 2.4
 6.4
 2.2
 6.0
 5.3
 6.3
 2.9
 3.2
 1.7

15 CEP95 centrosomal protein 95 90799 0 6.4 6.9
 2.5
 4.3
 3.5
 3.5
 2.0
 3.5
 0.3



16 DDX23 DEAD-box helicase 23 9416 1 6.4 5.2
 3.2
 6.0
 5.0
 2.0
 3.2
 3.8
6.5
 5.4
 9.2
 1.3
17 GORAB golgin, RAB6 interacting 92344 0 6.2 6.6
 2.2
 4.3
 0.5
 0.5
 -0.3
 1.6
 0.9
 2.1
 0.4

18 RBM39 RNA binding motif protein 39 9584 0 6.2 4.5
 1.4
 6.4
 3.0
2.2
 1.3
 3.7
 4.5
-0.7
 2.5
 3.4
1.9
 3.9
 2.1
19 RBM6 RNA binding motif protein 6 10180 0 6.2 6.1
 1.7
 4.8
 5.8
 4.5
 5.1
 6.2
 2.3



20 DMTF1 cyclin D binding myb like transcription factor 1 9988 0 6.1 4.8
 2.0
 5.9
 3.1
 2.0
 1.8
 2.3
 0.7
 2.8

3.2
-1.1
21 RBM25 RNA binding motif protein 25 58517 0 6.0 5.4
 1.8
 5.3
 1.8
 3.1
 3.1
 2.8
 3.1
 2.9
-0.3
 5.9
 5.4
22 ZNF207 zinc finger protein 207 7756 0 6.0 5.1
 0.2
 5.4
 3.3
 3.4
 3.7
 1.2
 2.3
 1.5
0.1
 2.8
 0.6
23 SCNM1 sodium channel modifier 1 79005 0 6.0 4.4
 2.8
 6.1
 1.1
 2.9
 2.8
 5.5
 2.1
 0.6


24 EWSR1 EWS RNA binding protein 1 2130 0 5.9 5.7
 1.9
 4.6
 3.5
 3.0
 3.0
 1.7
 2.8
 2.5
-0.1
 3.1

25 TARDBP TAR DNA binding protein 23435 0 5.9 6.1
 2.2
 4.3
 4.5
 4.2
 4.9
 3.6
 2.4
 1.8
1.1
 3.9
-0.2
 1.9
26 YJU2B YJU2 splicing factor homolog B 81576 0 5.9 5.7
 1.9
 4.6
 1.8
 2.7
 3.2
 2.4
 -0.0
 3.1
 0.3
 1.1
27 POGZ pogo transposable element derived with ZNF domain 23126 0 5.8 5.8
 2.2
 4.4
 2.8
 3.4
 1.1
 3.5
 1.0
 2.8
2.1
 2.4

28 EDRF1 erythroid differentiation regulatory factor 1 26098 0 5.8 5.5
 1.8
 4.7
 4.0
 5.2
 3.0
 2.2
 1.2
 3.1
 0.3

29 USPL1 ubiquitin specific peptidase like 1 10208 0 5.8 5.6
 2.7
 4.5
 5.0
 7.0
 4.4
 3.4
 0.1
 2.1


30 NXF1 nuclear RNA export factor 1 10482 0 5.8 5.2
 3.1
 4.9
 3.2
 5.8
-0.1
 5.1
-0.1
 1.7
 2.3
 0.3
-1.4
 1.1
0.3
 -0.5
-1.2
 -1.3
31 PRPF38B pre-mRNA processing factor 38B 55119 0 5.7 5.3
 1.5
 4.8
 1.3
 6.0
 6.4
 4.6
 3.7
 3.1
 3.1
 5.1
32 RBBP5 RB binding protein 5, histone lysine methyltransferase complex subunit 5929 0 5.6 4.2
 1.0
 5.7
 2.2
 5.4
 3.6
 1.1
 2.3
 0.7
 5.2
 2.0
 -1.2
33 CWC25 CWC25 spliceosome associated protein homolog 54883 0 5.6 4.9
 2.3
 5.0
 2.5
 1.9
 2.8
 2.5
 3.7
 3.8
 4.6
 4.4
 0.3
34 YY1AP1 YY1 associated protein 1 55249 0 5.6 4.3
 2.3
 5.5
 4.4
1.5
 4.5
 1.1
 4.2
 0.9
 2.6
1.9
 2.2
 3.3
35 SRSF11 serine and arginine rich splicing factor 11 9295 0 5.6 4.3
 0.8
 5.5
 0.9
 3.4
 3.5
 3.7
 3.3
 2.0


36 MRPL9 mitochondrial ribosomal protein L9 65005 0 5.6 4.9
 3.0
 4.9
 0.7
 1.1
 0.3
 3.7
 0.4
 0.9
 -0.7
 -0.1
37 PIP5K1A phosphatidylinositol-4-phosphate 5-kinase type 1 alpha 8394 0 5.5 5.1
 1.0
 4.6
 1.4
 1.4
0.7
 1.2
-0.4
 4.1
-0.5
 1.4
1.2
 2.8
2.0
 1.9
0.1
 1.8
38 ANKLE2 ankyrin repeat and LEM domain containing 2 23141 0 5.5 4.7
 1.9
 4.9
 2.7
 1.3
 1.4
 1.2
 3.1
 0.7
-0.3
 1.8
 0.9
39 FNBP4 formin binding protein 4 23360 0 5.5 5.3
 1.1
 4.3
 1.7
 1.7
 3.8
 2.7
 1.6
 0.7


40 NUP85 nucleoporin 85 79902 0 5.4 5.3
 2.8
 4.2
 3.1
 3.5
 2.6
 0.3
 1.4
 2.0
 1.8
 4.0
41 PSPC1 paraspeckle component 1 55269 0 5.3 5.0
 2.3
 4.4
 3.7
1.8
 4.9
2.9
 3.1
2.8
 3.4
2.3
 2.8
2.1
 3.0
0.7
 4.0
2.1

42 PRPF4B pre-mRNA processing factor 4B 8899 0 5.3 4.9
 2.3
 4.5
 0.5
 3.4
 5.3
 2.2
 2.5
 7.1
5.3
 3.2
 5.4
43 DDX56 DEAD-box helicase 56 54606 0 5.3 4.7
 1.9
 4.7
1.2
 3.6
 0.2
3.2
 2.2
 4.9
 1.0
44 RSRC2 arginine and serine rich coiled-coil 2 65117 0 5.3 4.3
 1.7
 5.0
 2.6
 2.8
 4.9
 2.2
 3.0
 1.5
 1.5
 3.3
45 VPS72 vacuolar protein sorting 72 homolog 6944 0 5.3 4.5
 2.5
 4.8
 2.2
 1.9
 2.0
 4.4
 2.2
 1.2
-0.7
 2.7
 3.2
46 METTL3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit 56339 0 5.3 4.8
 2.2
 4.4
 4.7
 5.9
 4.9
 3.2
 1.3
 3.8
 3.0

47 HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 3187 0 5.3 3.7
 1.2
 5.6
 3.1
2.1
 4.5
4.4
 4.7
3.5
 4.9
3.9
 4.2
3.1
 0.9
0.0
 7.2
 2.8
48 USF1 upstream transcription factor 1 7391 0 5.2 4.4
 0.4
 4.8
 1.4
1.4
 -0.1
-0.5
 1.7
0.9
 -0.4
-0.7
 2.9
1.2
 2.5
0.0
 1.1
0.5
49 SAFB2 scaffold attachment factor B2 9667 0 5.2 3.9
 2.2
 5.2
 2.9
2.3
 8.0
5.5
 4.3
4.3
 4.2
3.6
 3.6
3.2
 2.7
 4.4

50 RBM22 RNA binding motif protein 22 55696 0 5.2 5.8
 1.4
 3.3
 2.9
 2.3
 3.2
 2.3
0.1
 1.6
 2.9
 3.2
 3.6
 1.5
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