Orthologous genes in OrthoFinder**

Species Gene Description
 hsa-u.4   ROM1   retinal outer segment membrane protein 1 
 hsa-r.6   ROM1   retinal outer segment membrane protein 1 
 hsa-m.7   ROM1   retinal outer segment membrane protein 1 
 hsa-m2.4   ROM1   retinal outer segment membrane protein 1 
 mcc-u.3   ROM1   retinal outer segment membrane protein 1 
 mmu-u.4   Rom1   rod outer segment membrane protein 1 
 rno-u.3   Rom1   retinal outer segment membrane protein 1 
 cfa-u.3   ROM1   retinal outer segment membrane protein 1 

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Top 50 coexpressed genes to ROM1 (hsa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 hsa4370   VEGF signaling pathway  2 59 -
 hsa1522   Endocrine resistance  2 98 -
 hsa4933   AGE-RAGE signaling pathway in diabetic complications  2 100 -
 hsa4722   Neurotrophin signaling pathway  2 119 -
 hsa4919   Thyroid hormone signaling pathway  2 121 -

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hsa:ROM1 (retinal outer segment membrane protein 1) External Links;


Show/Hide Columns:          
Show Coexpressed Genes
UMAP
Gene Function KEGG Entrez
Gene
ID		 Other ID CoexPub LINK Target Reference

hsa-u.4
for
ROM1
hsa-r.6
for
ROM1
hsa-m.7
for
ROM1
hsa-m2.4
for
ROM1
mcc-u.3
for
ROM1
mmu-u.4
for
Rom1
rno-u.3
for
Rom1
cfa-u.3
for
ROM1
1 EML3 EMAP like 3 256364 0 8.0 10.1
 3.3
 3.9
 3.7
2.3
 10.0
2.2
 7.4
0.5
 3.4
0.6
2 LOC283335 uncharacterized LOC283335 283335 0 4.7 4.7
 4.2




3 ZNF436-AS1 ZNF436 antisense RNA 1 148898 0 4.1 3.7
 1.5
 3.5



4 C1orf122 chromosome 1 open reading frame 122 127687 0 4.1 4.1
 1.4
 3.1
 1.6
 1.9
 2.3
 3.2
5 LOC105371912 uncharacterized LOC105371912 105371912 0 4.0 4.0





6 GPR137 G protein-coupled receptor 137 56834 0 3.9 3.8
 0.9
 3.1
 -1.5
 2.1
 1.0
 1.5
7 LRRC29 leucine rich repeat containing 29 26231 0 3.8 3.5
 2.1
 3.2
 0.2
 1.7

8 MAPK11 mitogen-activated protein kinase 11 5600 0 3.8 3.0
 2.5
 3.6
 0.2
-1.2
 0.8
0.2
 1.8
1.0
 0.4
-0.1
9 TMED1 transmembrane p24 trafficking protein 1 11018 0 3.8 3.0
 0.4
 3.6
 1.1
-1.8
 3.7
0.1
 2.5
0.0
 0.9
-1.2
10 TLCD2 TLC domain containing 2 727910 0 3.8 3.2
 1.2
 3.4
0.9

11 JOSD2 Josephin domain containing 2 126119 0 3.7 2.4
 1.2
 4.1
 0.3
-0.2
 1.1
0.1
 2.3
-0.3
 1.4
0.3
12 RAB11B-AS1 RAB11B antisense RNA 1 100507567 0 3.7 3.7





13 PRR34 PRR34 long non-coding RNA 55267 0 3.7 2.4
 0.1
 4.0



14 ZNF576 zinc finger protein 576 79177 0 3.6 2.6
 1.1
 3.8
 0.1

0.2
15 MAN1B1-DT MAN1B1 divergent transcript 100289341 0 3.6 3.6
 0.5




16 LOC105371763 uncharacterized LOC105371763 105371763 0 3.6 3.6





17 C16orf86 chromosome 16 open reading frame 86 388284 0 3.6 3.4
 2.7
 2.9
 1.2


18 IZUMO4 IZUMO family member 4 113177 0 3.5 2.9
 1.2
 3.3
 0.9
 1.5
 2.0
19 RAB26 RAB26, member RAS oncogene family 25837 0 3.5 2.9
 0.2
 3.1
 1.8
1.4
 3.5
1.2
 1.8
 0.4
20 MBLAC1 metallo-beta-lactamase domain containing 1 255374 0 3.4 2.6
 0.9
 3.4
 1.5
 0.8
 1.5
 1.8
21 HSD11B1L hydroxysteroid 11-beta dehydrogenase 1 like 374875 0 3.4 2.7
 1.1
 3.4
 -0.2
-0.3
 0.6
 -0.2
-0.3
 0.5
-0.7
22 CCDC103 coiled-coil domain containing 103 388389 0 3.4 2.9
 2.0
 3.1
 0.4

0.4
23 PHYHIP phytanoyl-CoA 2-hydroxylase interacting protein 9796 0 3.4 1.8
 2.2
 4.3
 0.8
-0.5
 1.4
0.0
 -0.5
-1.0
 0.5
-0.5
24 SWI5 SWI5 homologous recombination repair protein 375757 0 3.4 3.1
 0.6
 2.9
 1.6
 0.6
 1.4
 0.4
25 CTF1 cardiotrophin 1 1489 0 3.4 3.0
 3.3
 2.9
 0.1
 1.2
 -0.0
26 ALOX12-AS1 ALOX12 antisense RNA 1 100506713 0 3.4 3.4





27 GPR37L1 G protein-coupled receptor 37 like 1 9283 0 3.4 1.6
 0.7
 4.4
 0.7
 0.9
 -0.1
 0.6
28 DSTNP2 DSTN pseudogene 2 171220 0 3.4 3.2
 0.4
 2.8



29 AGAP2-AS1 AGAP2 antisense RNA 1 100130776 0 3.4 3.4
 0.2




30 PLCD4 phospholipase C delta 4 84812 0 3.3 3.2
 1.1
 2.6
 2.0
0.8
 2.4
2.3
 2.4
1.0
 1.8
0.9
31 EXOC3-AS1 EXOC3 antisense RNA 1 116349 0 3.3 2.9
 1.3
 2.9



32 HSD3B7 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 80270 0 3.3 3.8
 0.7
 2.0
 0.4
-0.7
 0.5
-0.6
 1.0
0.3
 1.4
0.7
33 MIR497HG mir-497-195 cluster host gene 100506755 0 3.3 3.3





34 ISY1 ISY1 splicing factor homolog 57461 0 3.3 3.7
 1.3
 2.0
 -0.0
 0.4
 1.7
 0.9
35 SPSB2 splA/ryanodine receptor domain and SOCS box containing 2 84727 0 3.3 1.9
 0.7
 3.8
 1.7
 2.7
2.1
36 B9D2 B9 domain containing 2 80776 0 3.2 2.6
 1.9
 3.1
 -0.3
 2.4
 2.0
 2.1
37 URB1-AS1 URB1 antisense RNA 1 (head to head) 84996 0 3.2 3.0
 1.2
 2.6



38 PINLYP phospholipase A2 inhibitor and LY6/PLAUR domain containing 390940 0 3.2 1.8
 0.5
 3.8
0.3
 0.9
 0.4
39 CAPS calcyphosine 828 0 3.2 2.3
 1.9
 3.3
 2.4
-0.7
 -1.0
0.9
40 BAD BCL2 associated agonist of cell death 572 0 3.2 3.1
 1.5
 2.4
 0.7
 3.5
 2.2
 2.5
41 FMC1 formation of mitochondrial complex V assembly factor 1 homolog 154791 0 3.1 3.2
 1.2
 2.4
0.3
 1.2
 0.8
42 PRX periaxin 57716 0 3.1 1.6
 2.1
 3.9
 0.9
 0.8
 0.6
 2.6
43 LOC101928487 uncharacterized LOC101928487 101928487 0 3.1 3.2





44 SP2-DT SP2 divergent transcript 102724532 0 3.1 3.2





45 TNS2 tensin 2 23371 0 3.1 3.8
 0.6
 1.7
 0.0
 1.4
 -0.2
 0.8
46 NUDT22 nudix hydrolase 22 84304 0 3.1 2.4
 1.2
 3.0
 -0.6
 4.3
 0.9
 1.6
47 LOC100652758 uncharacterized LOC100652758 100652758 0 3.1 3.1





48 TCTA T cell leukemia translocation altered 6988 0 3.1 3.6
 1.9
 1.8
 0.8
 2.3
 1.2
 2.1
49 VPS13B-DT VPS13B divergent transcript 105375666 0 3.1 3.1





50 TOLLIP-DT TOLLIP divergent transcript 255512 0 3.0 3.1
 1.1




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