Orthologous genes in OrthoFinder**

Species Gene Description
 hsa-u.4   SYNCRIP   synaptotagmin binding cytoplasmic RNA interacting protein 
 hsa-r.6   SYNCRIP   synaptotagmin binding cytoplasmic RNA interacting protein 
 hsa-m.7   SYNCRIP   synaptotagmin binding cytoplasmic RNA interacting protein 
 hsa-m2.4   SYNCRIP   synaptotagmin binding cytoplasmic RNA interacting protein 
 hsa-u.4   HNRNPR   heterogeneous nuclear ribonucleoprotein R 
 mcc-u.3   HNRNPR   heterogeneous nuclear ribonucleoprotein R 
 mcc-u.3   SYNCRIP   synaptotagmin binding cytoplasmic RNA interacting protein 
 mmu-u.4   Syncrip   synaptotagmin binding, cytoplasmic RNA interacting protein 
 mmu-u.4   Hnrnpr   heterogeneous nuclear ribonucleoprotein R 
 rno-u.3   Syncrip   synaptotagmin binding, cytoplasmic RNA interacting protein 
 rno-u.3   Hnrnpr   heterogeneous nuclear ribonucleoprotein R 
 cfa-u.3   SYNCRIP   synaptotagmin binding cytoplasmic RNA interacting protein 
 cfa-u.3   HNRNPR   heterogeneous nuclear ribonucleoprotein R 
 gga-u.3   SYNCRIP   synaptotagmin binding cytoplasmic RNA interacting protein 
 gga-u.3   HNRNPR   heterogeneous nuclear ribonucleoprotein R 
 dre-u.3   syncrip   synaptotagmin binding, cytoplasmic RNA interacting protein 
 dre-u.3   syncripl   synaptotagmin binding, cytoplasmic RNA interacting protein, like 
 dme-u.3   Syp   Syncrip 
 cel-u.3   hrpr-1   Heterogeneous nuclear RibonucleoProtein (HnRNP) R homolog 

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Top 50 coexpressed genes to SYNCRIP (hsa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 hsa3040   Spliceosome  11 127 7.01
 hsa3008   Ribosome biogenesis in eukaryotes  5 74 5.56
 hsa5202   Transcriptional misregulation in cancer  4 165 2.82
 hsa3015   mRNA surveillance pathway  3 82 2.72
 hsa5014   Amyotrophic lateral sclerosis  4 364 -

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hsa:SYNCRIP (synaptotagmin binding cytoplasmic RNA interacting protein) External Links;


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Show Coexpressed Genes
UMAP
Gene Function KEGG Entrez
Gene
ID		 Other ID CoexPub LINK Target Reference

hsa-u.4
for
SYNCRIP
hsa-r.6
for
SYNCRIP
hsa-m.7
for
SYNCRIP
hsa-m2.4
for
SYNCRIP
hsa-u.4
for
HNRNPR
mcc-u.3
for
HNRNPR
mcc-u.3
for
SYNCRIP
mmu-u.4
for
Syncrip
mmu-u.4
for
Hnrnpr
rno-u.3
for
Syncrip
rno-u.3
for
Hnrnpr
cfa-u.3
for
SYNCRIP
cfa-u.3
for
HNRNPR
gga-u.3
for
SYNCRIP
gga-u.3
for
HNRNPR
dre-u.3
for
syncrip
dre-u.3
for
syncripl
dme-u.3
for
Syp
cel-u.3
for
hrpr-1
1 NCL nucleolin 4691 7 10.4 11.7
 3.6
 6.7
 9.8
 8.8
 3.9
 10.2
 6.7
 6.3
 4.5
 6.1
 6.1
 4.7
 7.3
 5.3
 2.0

2 HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 220988 3 9.1 7.4
 2.7
 8.6
 12.6
12.2
 11.5
6.0
 5.2
4.8
 6.8
4.8
 6.5
6.2
 6.6
4.6
 6.4
4.5
 4.3
1.3
 8.1
4.7
 5.3
3.6
 10.7
8.7
 6.9
3.6
 3.1
2.4
 2.5
2.1
 8.0
3 HNRNPU heterogeneous nuclear ribonucleoprotein U 3192 9 8.8 8.2
 3.5
 7.2
 11.6
5.0
 9.6
5.1
 5.5
2.5
 9.3
3.1
 7.2
3.5
 6.1
5.7
 7.7
2.7
 5.0
2.2
 5.8
3.3
 2.8
2.2
 7.6
2.9
 7.2
4.9
 3.4
3.1
 1.2
 4.2
4 BCLAF1 BCL2 associated transcription factor 1 9774 0 8.8 8.7
 4.2
 6.7
 6.3
 4.6
 4.1
 8.3
 5.3
 2.8
 2.3
 6.5
 6.3
 6.1
 5.7



5 HDAC2 histone deacetylase 2 3066 0 8.5 9.6
 3.4
 5.2
 5.6
4.7
 5.8
3.5
 4.1
2.7
 4.6
2.2
 6.4
3.5
 3.0
0.6
 5.7
2.1
 6.1
0.5
 3.6
2.2
 2.5
0.6
 5.8
2.3
 5.5
1.3
 1.1
0.1
 1.5
 3.6
1.9
6 HNRNPM heterogeneous nuclear ribonucleoprotein M 4670 0 8.2 7.7
 2.1
 6.7
 11.4
1.6
 8.0
-0.1
 6.2
1.5
 6.0
2.6
 6.4
2.0
 3.3
2.3
 5.1
4.0
 4.5
0.2
 9.8
1.3
 3.9
2.8
 9.8
4.6
 2.7
2.4
 0.2
-0.1
 1.4
 3.3
7 HNRNPK heterogeneous nuclear ribonucleoprotein K 3190 3 7.8 7.3
 3.3
 6.3
 10.3
 7.8
 6.6
 5.4
 9.0
 3.5
0.8
 7.9
1.4
 4.3
 4.0
 3.4
0.9
 6.1
0.5
 2.8
2.0
 0.3
-0.6
 1.5
 4.9
8 HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 3181 23 7.7 9.3
 1.9
 4.3
 12.6
12.2
 11.5
6.0
 5.2
4.8
 6.8
4.8
 6.5
6.2
 6.6
4.6
 6.4
4.5
 4.3
1.3
 8.1
4.7
 5.3
3.6
 10.7
8.7
 6.9
3.6
 3.1
2.4
 2.5
2.1
 8.0
9 HNRNPD heterogeneous nuclear ribonucleoprotein D 3184 8 7.7 7.2
 2.8
 6.2
 11.3
10.1
 7.5
7.5
 6.2
5.4
 7.8
4.5
 7.6
7.5
 4.7
4.4
 6.8
4.9
 4.6
2.0
 7.3
5.5
 3.7
3.4
 8.8
5.7
 6.0
5.1
 4.5
3.2
 4.7
 3.8
10 DHX9 DExH-box helicase 9 1660 3 7.6 7.1
 2.2
 6.2
 8.9
 7.0
 6.7
 7.1
 5.3
 3.6
 6.3
 5.1
 7.1

4.6
 1.5
 0.3
-0.2
 4.0
11 SFPQ splicing factor proline and glutamine rich 6421 5 7.6 7.6
 3.8
 5.7
 9.1
5.6
 7.9
3.7
 5.3
3.1
 7.6
4.5
 6.2
5.7
 6.1
3.3
 5.2
4.0
 5.7
2.0
 6.3
3.7
 4.0
3.2
 11.2
6.7
 7.6
7.1
 3.1
2.8
 3.2
0.7
12 LTV1 LTV1 ribosome biogenesis factor 84946 0 7.5 8.7
 2.7
 4.5
 4.7
 6.6
 4.1
 6.3
 2.1
 3.9
 3.7
 5.5
 1.9
 2.8
 1.3
 2.2
 2.3
 -1.3
 1.2
13 HNRNPR heterogeneous nuclear ribonucleoprotein R 10236 13 7.5 8.2
 3.2
 4.9
 7.5
 5.0
 5.0
 7.1
 7.1
 4.9
 4.9
 4.0
 4.0
 4.3
 4.3
 5.3
 5.3

14 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit 80155 0 7.4 8.1
 2.9
 4.8
 4.4
1.1
 5.3
0.9
 5.9
1.7
 9.0
2.5
 4.4
0.4
 6.8
3.4
 3.8
0.3
 6.6
0.9
 2.4
1.9
 4.0
2.5
 3.6
0.6
 3.9
2.4
 3.3
1.9
 1.1
 1.5
15 DKC1 dyskerin pseudouridine synthase 1 1736 0 7.2 7.7
 3.3
 4.9
 6.1
 5.5
 6.0
 7.2
 4.8
 2.1
 1.4
 6.2
0.2
 3.1
0.3
 4.0
 3.2
 3.5
 4.2
 -0.0
 2.2
16 EIF3A eukaryotic translation initiation factor 3 subunit A 8661 1 7.2 8.2
 3.4
 4.4
 5.9
 5.6
 4.7
 9.6
 6.1
 5.7
 5.5
 6.2
 4.8
 3.0
 3.9
 4.4
 0.6
 0.3
 4.2
17 NOP58 NOP58 ribonucleoprotein 51602 0 7.1 7.2
 2.2
 5.3
 5.6
 3.7
 6.2
 8.7
 4.1
 6.2
 4.0
 7.3
 3.6
 4.9
 1.7
 3.9
 3.9
 -1.3
 3.8
18 FUS FUS RNA binding protein 2521 0 7.0 5.8
 1.8
 6.5
 8.6
6.9
 4.1
3.6
 4.0
2.9
 5.3
2.5
 7.3
3.6
 3.1
2.5
 6.6
2.3
 1.8
1.4
 6.9
3.5
 2.4
1.7
 6.7
3.2
 3.3
2.0
 1.5
1.3

19 SEC63 SEC63 homolog, protein translocation regulator 11231 0 6.9 7.9
 3.6
 4.3
 2.6
 2.8
 5.2
 3.3
 1.6
 4.4
 2.7
 4.5
 2.2
 0.8
 1.2
 3.1
 1.6
 0.2
 3.5
20 PRPF40A pre-mRNA processing factor 40 homolog A 55660 0 6.9 8.5
 2.6
 3.7
 5.0
0.1
 5.8
-0.2
 5.4
-2.1
 8.1
-1.4
 6.6
-0.0
 4.5
0.0
 4.3
-0.5
 4.6
-0.8
 4.3
-0.9
 2.8
 2.4
 7.0
 2.0
 2.0
 0.8
21 HNRNPAB heterogeneous nuclear ribonucleoprotein A/B 3182 6 6.9 6.8
 3.5
 5.3
 11.3
10.1
 7.5
7.5
 6.2
5.4
 7.8
4.5
 7.6
7.5
 4.7
4.4
 6.8
4.9
 4.6
2.0
 7.3
5.5
 3.7
3.4
 8.8
5.7
 6.0
5.1
 4.5
3.2
 4.7
 3.8
22 GTPBP4 GTP binding protein 4 23560 0 6.8 7.3
 2.7
 4.6
 4.6
 2.0
 4.7
 6.6
 3.6
 3.6
 2.7
 3.6
 3.9
 3.3
 1.1
 1.2
 -0.6
 -1.3
 1.0
23 DDX18 DEAD-box helicase 18 8886 0 6.8 6.7
 3.3
 5.2
 4.6
 2.7
 5.4
 3.1
 1.6
 3.4
 0.8
 5.3
 3.6
 4.7
 2.6
 3.3
 2.2
 -1.2
 0.2
24 EIF5B eukaryotic translation initiation factor 5B 9669 0 6.6 7.5
 3.2
 4.1
 4.8
 4.2
 6.2
 5.7
 3.1
 4.7
 3.6
 4.3
 3.2
 1.6
 1.4
 2.7
 4.9
 2.4
 5.3
25 TRA2B transformer 2 beta homolog 6434 1 6.6 5.0
 3.3
 6.6
 7.3
3.9
 4.8
2.4
 3.1
1.8
 6.3
2.0
 5.2
3.2
 4.8
2.7
 5.9
1.2
 4.2
0.5
 4.5
2.5
 2.1
1.0
 6.5
4.6
 1.8
0.1
 -0.9
-1.6
 0.7
 8.6
26 RRP15 ribosomal RNA processing 15 homolog 51018 0 6.5 6.4
 1.8
 5.1
 3.0
 2.5
 5.8
 4.4
 2.0
 4.8
 2.3
 3.8
 5.0
 4.6
 4.0
 1.7
 1.8
 -0.8
 2.8
27 TAF15 TATA-box binding protein associated factor 15 8148 0 6.4 5.0
 0.6
 6.3
 8.6
6.9
 4.1
3.6
 4.0
2.9
 5.3
2.5
 7.3
3.6
 3.1
2.5
 6.6
2.3
 1.8
1.4
 6.9
3.5
 2.4
1.7
 6.7
3.2
 3.3
2.0
 1.5
1.3

28 FUBP1 far upstream element binding protein 1 8880 0 6.4 7.5
 1.9
 3.8
 10.4
4.3
 6.0
4.8
 3.1
2.6
 5.9
2.4
 6.5
3.9
 5.4
2.6
 5.6
1.1
 4.3
1.3
 5.1
2.2
 2.9
2.7
 3.8
2.8
 6.9
4.6
 3.0
1.7
 3.2
 5.0
3.2
29 DDX21 DExD-box helicase 21 9188 0 6.4 7.2
 2.8
 4.0
 4.9
 5.1
 5.4
 8.3
 2.8
 8.5
 5.4
 5.6
 2.6
 4.1
 3.2
 2.5
 0.2

30 DHX15 DEAH-box helicase 15 1665 0 6.3 6.1
 3.1
 5.0
 7.9
3.4
 5.7
1.9
 4.3
2.7
 7.3
2.2
 4.3
1.2
 4.7
1.2
 4.5
1.2
 5.9
1.5
 5.8
1.6
 3.6
2.2
 3.9
2.9
 5.3
3.4
 3.2
3.0
 1.1
0.2
 4.6
4.1
31 NUS1 NUS1 dehydrodolichyl diphosphate synthase subunit 116150 0 6.3 5.2
 3.5
 5.8
 1.4
 1.3
 4.5
 1.5
 -0.2
 3.2
 0.6
 2.1
 0.9
 -0.2
 -2.0
 -0.5
 2.1
 -2.1
 -1.5
32 SERBP1 SERPINE1 mRNA binding protein 1 26135 0 6.3 8.3
 4.0
 2.7
 7.9
 9.6
 5.6
 7.2
 5.5
 7.1
 5.0
 3.7
 4.0
 3.2
 5.5
 4.2
3.3
 1.2
0.9
 4.4
-0.1
 7.9
33 EWSR1 EWS RNA binding protein 1 2130 2 6.3 5.3
 3.1
 5.6
 7.2
 5.2
 3.0
 4.2
 4.8
 2.4
 3.6
 1.1
 5.4
 2.2
 2.4
 4.5
2.0
 2.6
1.0
 -0.3
34 ABCF1 ATP binding cassette subfamily F member 1 23 0 6.2 7.2
 2.6
 3.7
 4.2
 4.5
 4.4
 5.0
 2.5
 2.2
 2.3
 4.0
 2.3

3.6
 2.7
 -0.3
 2.5
35 ILF3 interleukin enhancer binding factor 3 3609 4 6.2 7.4
 2.6
 3.6
 8.1
 3.0
 3.6
 4.9
 4.1
 1.6
 3.3
 3.4
 3.2
 1.7
 3.0
 7.3
 2.7

36 TARDBP TAR DNA binding protein 23435 0 6.2 7.1
 2.0
 3.8
 10.4
 6.0
 3.5
 4.3
 5.5
 5.4
 1.8
 3.6
 7.6
 3.7
 6.6
 5.4
5.0
 2.7
2.3
 0.4
-0.4
 1.5
37 EIF3J eukaryotic translation initiation factor 3 subunit J 8669 0 6.2 6.1
 2.2
 4.8
 3.2
 3.2
 5.1
 3.8
0.8
 0.7
0.2
 5.2
 2.4
 3.7
 2.1
 3.3
 4.2
 1.6
0.9
 1.7
1.2
 -0.0
38 SUPT16H SPT16 homolog, facilitates chromatin remodeling subunit 11198 0 6.2 7.0
 1.9
 3.8
 10.0
 7.5
 3.9
 8.9
 6.5
 4.5
 5.3
 2.7
 3.4
 1.3
 3.1
 4.3
 2.3
 1.9
 3.0
39 BMS1 BMS1 ribosome biogenesis factor 9790 0 6.2 7.9
 1.8
 3.0
 4.7
 2.6
1.6
 4.3
4.2
 4.0
 1.3
 4.1
 3.1
 3.3
 2.5
 5.0
 3.8
 4.5
 2.9
 -2.3
 3.3
40 GAR1 GAR1 ribonucleoprotein 54433 0 6.2 4.8
 2.5
 6.0
 5.0
 5.1
 4.3
 5.0
 4.1
 6.0
 2.5
 4.0
 4.1
 4.7
 5.7
 2.6
 1.7
 -1.1
 6.2
41 RNGTT RNA guanylyltransferase and 5'-phosphatase 8732 0 6.1 5.9
 2.7
 4.9
 1.5
 2.2
 0.5
 2.8
 1.7
 3.3
 2.5
 3.1
 2.7
 2.0
 1.6
 2.5
 1.9
 0.4
 1.0
-0.2
42 DDX46 DEAD-box helicase 46 9879 0 6.1 6.8
 1.9
 3.9
 7.3
 4.8
 4.8
 8.1
 4.6

4.0
 7.0
 3.3
 4.9
 4.4
 0.3
 0.7
43 SENP6 SUMO specific peptidase 6 26054 0 6.1 5.8
 2.7
 4.9
 1.7
-0.1
 1.6
0.6
 -0.0
-0.4
 3.4
-0.2
 3.5
1.6
 7.0
0.6
 3.4
3.1
 4.0
-0.2
 1.5
1.3
 0.7
-1.3
 0.4
0.2
 4.6
-0.3
 -0.5
-0.8
 1.1
0.0
 0.5
44 SRSF1 serine and arginine rich splicing factor 1 6426 2 6.1 5.5
 3.4
 5.2
 8.8
7.7
 4.8
4.2
 3.3
2.3
 5.7
4.4
 6.9
4.7
 6.0
3.8
 4.4
4.0
 3.3
3.0
 6.6
4.9
 2.7
2.2
 5.3
4.9
 3.8
3.2
 1.5
1.0
 1.7
0.2
 4.9
4.3
45 HNRNPH3 heterogeneous nuclear ribonucleoprotein H3 3189 0 6.0 4.3
 2.2
 6.3
 9.5
8.3
 7.4
6.7
 4.5
3.8
 4.8
4.6
 5.7
5.3
 5.2
5.1
 6.8
4.2
 3.7
2.7
 9.0
5.3
 4.9
3.5
 10.0
7.6
 2.0
-0.0
 2.0
0.3
 0.3
 5.0
46 HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 3187 0 6.0 4.0
 2.1
 6.6
 9.5
8.3
 7.4
6.7
 4.5
3.8
 4.8
4.6
 5.7
5.3
 5.2
5.1
 6.8
4.2
 3.7
2.7
 9.0
5.3
 4.9
3.5
 10.0
7.6
 2.0
-0.0
 2.0
0.3
 0.3
 5.0
47 RPF2 ribosome production factor 2 homolog 84154 0 6.0 6.2
 3.8
 4.3
 -0.1
 2.4
 4.2
 4.6
 1.6
 4.0
 2.1
 4.7
 0.5
 4.0
 2.2
 1.5
 -0.3
 -1.2
 1.3
48 SRSF10 serine and arginine rich splicing factor 10 10772 0 6.0 6.2
 2.0
 4.3
 8.0
0.8
 3.6
0.1
 3.8
-0.0
 8.2
 3.5
 6.3
-0.6
 2.1
-1.2
 3.2
-0.4
 3.1
-1.4
 3.0
 3.5
 3.2
1.4
 1.7
1.0

49 GTF3C6 general transcription factor IIIC subunit 6 112495 0 6.0 7.1
 3.0
 3.3
 2.6
 2.8
 3.5
 4.2
 2.6
 3.2
 1.8
 5.0
 3.3
 2.9
 3.3
 1.5
 1.1

50 RRS1 ribosome biogenesis regulator 1 homolog 23212 0 5.9 4.8
 2.3
 5.5
 2.5
 1.6
 4.6
 4.9
 2.6
 4.6
 2.3
 3.2
 1.4
 3.4
 -0.0
 3.5
 3.5
 -1.2
 2.0
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