Orthologous genes in OrthoFinder**

Species Gene Description
 gga-u.3   PLOD1   procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 
 gga-r.3   PLOD1   procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 
 gga-m.5   PLOD1   procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 
 gga-u.3   PLOD2   procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 
 hsa-u.4   PLOD3   procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 
 hsa-u.4   PLOD1   procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 
 hsa-u.4   PLOD2   procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 
 mmu-u.4   Plod1   procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 
 mmu-u.4   Plod2   procollagen lysine, 2-oxoglutarate 5-dioxygenase 2 
 mmu-u.4   Plod3   procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 
 rno-u.3   Plod1   procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 
 rno-u.3   Plod3   procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 
 rno-u.3   Plod2   procollagen lysine, 2-oxoglutarate 5-dioxygenase 2 
 mcc-u.3   PLOD1   procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 
 mcc-u.3   PLOD2   procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 
 mcc-u.3   PLOD3   procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 
 cfa-u.3   PLOD2   procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 
 cfa-u.3   PLOD1   procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 
 cfa-u.3   PLOD3   procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 
 dre-u.3   plod2   procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 
 dre-u.3   plod3   procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 
 dre-u.3   plod1a   procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1a 
 dme-u.3   Plod   procollagen lysyl hydroxylase 
 cel-u.3   let-268   Procollagen-lysine,2-oxoglutarate 5-dioxygenase 

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Top 50 coexpressed genes to PLOD1 (gga-u.3 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 gga4141   Protein processing in endoplasmic reticulum  13 150 6.40
 gga4142   Lysosome  3 119 2.21
 gga531   Glycosaminoglycan degradation  2 17 2.90
 gga513   Various types of N-glycan biosynthesis  2 40 2.16
 gga510   N-Glycan biosynthesis  2 47 2.02

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gga:PLOD1 (procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
UMAP
Gene Function KEGG Entrez
Gene
ID		 Other ID LINK Target Reference

gga-u.3
for
PLOD1
gga-r.3
for
PLOD1
gga-m.5
for
PLOD1
gga-u.3
for
PLOD2
hsa-u.4
for
PLOD3
hsa-u.4
for
PLOD1
hsa-u.4
for
PLOD2
mmu-u.4
for
Plod1
mmu-u.4
for
Plod2
mmu-u.4
for
Plod3
rno-u.3
for
Plod1
rno-u.3
for
Plod3
rno-u.3
for
Plod2
mcc-u.3
for
PLOD1
mcc-u.3
for
PLOD2
mcc-u.3
for
PLOD3
cfa-u.3
for
PLOD2
cfa-u.3
for
PLOD1
cfa-u.3
for
PLOD3
dre-u.3
for
plod2
dre-u.3
for
plod3
dre-u.3
for
plod1a
dme-u.3
for
Plod
cel-u.3
for
let-268
1 SERPINH1 serpin family H member 1 396228 6.3 3.6
 2.2
 3.2
 6.8
 6.2
 3.1
 4.7
 4.3
 3.2
 5.8
 3.7
 4.0
 2.1
 1.2
 2.1
 3.1
 4.2
 2.9
 2.4
2.2
 2.8
1.7
 5.0
4.6

2 CKAP4 cytoskeleton associated protein 4 418073 6.0 3.3
 2.3
 4.9
 2.9
 4.3
 2.0
 1.9
 2.0
 3.8
 0.8
 1.1
 1.6
 1.4
 1.5
 0.8
 3.5
 2.5
 4.0




3 P3H1 prolyl 3-hydroxylase 1 414142 5.7 3.3
 1.9
 1.4
 6.2
 8.1
 2.0
 6.3
 2.8
 6.8
 7.3
 7.4
 2.2
 3.1
 0.9
 5.2
 2.6
 4.3
 5.2
 2.7
2.6
 3.3
2.9
 6.0
5.7

4 PDIA6 protein disulfide isomerase family A member 6 421940 5.5 2.9
 2.2
 1.2
 4.1
 4.2
 2.0
 3.3
 0.8
 4.7
 3.0
 5.4
 0.8
 2.2
 1.4
 5.0
 0.9
 3.3
 4.4
 1.2
 4.9
 1.3
 2.3
 1.2
0.8
5 SELENON selenoprotein N 419587 5.4 3.1
 1.9
 1.1
 3.9
 3.4
 0.4
 3.9
 1.4
 4.7
 1.0
 3.1
 1.1
 2.9
 0.8
 2.3
 -0.5
 3.7
 1.6
 1.8
 2.5
 6.4

6 P4HA1 prolyl 4-hydroxylase subunit alpha 1 423704 5.4 2.6
 2.4
 2.5
 4.7
 10.0
 7.6
 7.1
 6.7
 6.6
 7.9
 4.3
 4.1
 1.2
 3.5
 0.7
 3.9
 4.9
 4.0
 4.6
4.0
 3.6
3.0
 14.0
6.0
 6.1
 7.8
4.3
7 RCN1 reticulocalbin 1 428602 5.3 3.3
 1.6
 3.0
2.7
 7.9
2.6
 5.8
3.4
 3.1
2.6
 4.3
2.4
 2.8
2.6
 3.8
2.4
 4.3
1.9
 3.8
0.5
 3.0
2.6
 2.6
1.1
 2.2
2.0
 3.2
0.1
 2.3
2.0
 3.8
3.7
 3.9
2.1
 2.8
2.8
 6.2
5.8
 5.7
4.1
 6.4
 4.3
8 GNPDA1 glucosamine-6-phosphate deaminase 1 416341 5.3 2.8
 2.2
 0.7
0.2
 0.9
-0.2
 -0.2
-0.3
 1.2
-1.8
 1.7
-0.6
 1.7
0.2
 -0.2
-2.4
 1.0
-0.9
 0.7
-0.6
 0.8
0.2
 1.2
-2.3
 0.7
0.0
 -0.0
-2.9
 0.1
-1.2
 0.5
-0.1
 -0.7
-0.7
 0.6
-0.2
 1.1
0.3
 -0.1
-0.2
 0.4
 0.3
9 SEC24D SEC24 homolog D, COPII coat complex component 422683 5.3 3.2
 1.7
 3.9
1.4
 3.0
1.7
 4.1
1.8
 1.8
0.4
 2.6
0.8
 0.6
0.6
 1.9
1.3
 3.6
0.3
 2.6
2.0
 1.0
-0.2
 1.9
1.8
 -0.2
-0.4
 3.1
2.1
 3.1
-0.9
 1.7
0.7
 3.6
1.9
 1.4
1.2
 4.2
1.0
 3.7
1.0
 1.4
 0.2
10 GBGT1 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 417163 5.2 2.0
 2.7
 0.9
 1.5
 0.8
 0.0








0.3
 2.5
 2.0
 0.3
-0.6
 0.7
-0.0
 -0.3
-0.6

11 FKBP9 FK506 binding protein 9 395652 5.2 2.4
 2.4
 4.1
 4.4
 4.9
 2.5
 3.9
 2.4
 3.4
 3.6
 1.7
 2.8
 1.9
 1.8
 3.2
 1.7
 3.0
 3.0
 3.7
 5.4
 5.3

12 CALR calreticulin 100859104 5.2 2.8
1.1
 4.5
 5.4
 1.7
 4.2
0.4
 0.8
-0.1
 5.4
-0.9
 2.9
 4.3
 0.2
 5.2
 0.6
 4.6
 1.1
 2.9
 5.4
 2.2
0.3
 4.6
4.4
 2.0
1.6
 1.8
 1.0
13 PDIA4 protein disulfide isomerase family A member 4 420785 5.1 3.3
 1.5
 2.7
 7.3
 5.7
 1.7
 3.6
 0.8
 3.9
 2.8
 4.2
 1.0
 2.9
 1.1
 6.8
 0.9
 3.5
 5.7
 -0.1
 4.3
 1.2
2.3
14 FKBP10 FK506 binding protein 10 427013 5.1 2.7
1.9
 4.1
 5.3
 2.4
 3.2
 4.0
 1.7
 3.7
 3.5
 4.6
 1.3
 0.8
 1.7
 1.5
 4.0
 2.5
 2.4
 5.8
 3.5

15 P4HB prolyl 4-hydroxylase subunit beta 374091 4.8 3.2
 1.3
 2.6
1.3
 6.0
4.8
 8.9
5.2
 3.4
2.2
 4.3
3.0
 2.0
0.9
 5.3
3.9
 3.6
2.3
 5.8
3.7
 1.9
1.0
 3.2
1.6
 1.5
0.9
 4.2
2.3
 2.3
1.7
 4.5
1.7
 5.6
4.2
 0.7
0.7
 4.7
3.2
 3.1
2.1
 2.4
1.7
 2.4
1.5
16 TNFRSF1A TNF receptor superfamily member 1A 418325 4.8 2.9
 1.6
 2.4
 1.8
 2.1
 0.6
 3.1
 -0.6
 4.7


1.9
 -0.3
 -0.5
 -2.9
 1.1
 1.2
 2.1
-0.3
 -0.0
-0.5
 1.3
-0.3

17 EPRS glutamyl-prolyl-tRNA synthetase 421348 4.8 1.8
 2.6
 1.3
 2.5
 1.4
 1.2
 0.7
 0.4
 0.9
 0.6
 1.6
 0.2
 2.2
 1.5
 1.7
 2.8
 0.9
 1.0
 0.9
 3.1
 0.3
 1.8
 0.7
-0.0
18 RPN1 ribophorin I 416017 4.7 2.8
 1.6
 1.9
 5.0
 4.7
 2.1
 2.4
 0.8
 4.6
 2.0
 3.1
 -0.3
 3.0
 -0.1
 1.9
 0.9
 2.7
 4.9
 1.3
 5.3
 2.4
 1.0
 0.8
19 HSP90B1 heat shock protein 90 beta family member 1 374163 4.7 2.8
 1.6
 2.8
-1.0
 5.1
2.1
 5.3
1.3
 3.2
0.4
 3.4
2.1
 1.7
1.4
 3.7
1.8
 3.4
3.0
 4.9
1.1
 1.5
1.1
 2.0
1.7
 0.5
0.5
 2.3
0.7
 3.1
1.2
 3.1
0.2
 4.0
0.9
 3.4
0.8
 4.3
1.4
 3.5
1.6
 2.9
2.6
 1.0
-1.2
20 SURF4 surfeit 4 374273 4.6 3.1
 1.2
 1.4
 4.5
 4.1
 1.5
 3.3
 0.4
 3.8
 1.9
 3.7
 0.0
 2.5
 2.2
 2.4
 1.0
 4.1
 3.6
 2.1
-0.9
 5.7
3.4
 2.3
1.2
 0.9
 1.1
0.2
21 GUSB glucuronidase beta 427823 4.6 2.6
 1.7
 0.4
 5.7
 2.3
 -0.3
 2.3
 0.8
 3.7
 3.0
 2.9
 0.7
 0.5
 0.9
 2.0
 -0.7
 1.7
 5.2
 0.7
 0.1
 0.1
 2.4
-0.3
 2.7
22 KDELR2 KDEL endoplasmic reticulum protein retention receptor 2 771927 4.6 2.9
 1.4
 2.0
1.8
 5.0
4.9
 4.6
4.2
 2.8
2.1
 3.2
3.0
 4.3
1.3
 3.2
3.0
 3.1
2.9
 6.2
5.1
 1.9
0.5
 2.2
0.9
 1.4
0.7
 3.6
3.4
 2.8
1.3
 4.3
3.2
 5.5
4.1
 2.2
1.2
 6.2
5.9
 4.0
3.4
 1.5
 2.4
0.6
23 CREB3L2 cAMP responsive element binding protein 3 like 2 418123 4.6 3.3
 1.0
 2.1
0.8
 4.7
0.6
 2.7
1.2
 1.3
0.2
 4.0
2.1
 2.9
1.6
 3.5
2.1
 2.3
1.4
 2.0
1.7
 2.8
0.2
 2.3
0.3
 0.8
0.1
 3.0
2.8
 2.2
0.0
 2.3
0.2
 1.6
0.2
 2.1
2.1
 2.7
1.5
 2.9
2.4
 -0.3
 -0.7
24 SRPRA SRP receptor alpha subunit 419713 4.5 2.6
 1.6
 0.3
 2.4
 1.8
 0.3
 2.7
 0.5
 2.7
 1.9
 4.2
 0.1
 1.6
 1.2
 1.8
 0.4
 3.3
 3.2
 0.8
 1.0
 1.8
 0.7
 2.2
25 LOC416755 uncharacterized LOC416755 416755 4.5 2.4
0.7














2.0
 1.5
 0.7

26 HSPG2 heparan sulfate proteoglycan 2 429806 4.5 2.3
 1.8
 2.0
 3.6
 4.0
 1.3
 2.8
 2.5
 1.3
 2.5
 2.8
 2.0
 1.5
 0.6
 2.6
 1.1
 1.3
 0.1
 3.3
 2.7
 3.1
 4.3
27 RPN2 ribophorin II 419177 4.5 3.2
 0.9
 0.9
 5.5
 5.2
 1.8
 4.7
 0.5
 7.4
 2.8
 6.2
 0.0
 1.6
 0.8
 4.7
 1.1
 2.3
 4.8
 2.8
 5.4
 2.5
 3.2
 -0.1
28 APP amyloid beta precursor protein 374198 4.5 2.1
 2.1
 2.0
0.2
 2.9
2.6
 4.0
2.3
 3.3
1.5
 3.3
2.0
 1.9
0.7
 3.6
2.0
 2.2
2.0
 2.5
1.7
 0.1
-0.2
 3.2
2.7
 0.6
-0.1
 2.7
2.0
 3.0
1.2
 2.7
2.3
 2.6
2.3
 0.2
-0.2
 0.4
0.2
 0.5
-0.1
 -0.3
 1.2
29 LOC121108916 multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3-like 121108916 4.4 2.4





















30 GLB1 galactosidase beta 1 420720 4.4 2.9
 1.3
 2.0
0.6
 4.9
1.6
 4.7
3.0
 1.4
0.6
 2.7
0.6
 1.1
0.8
 3.1
1.1
 3.9
1.4
 4.3
1.7
 1.6
0.9
 4.2
1.1
 0.4
-0.5
 4.5
0.6
 1.1
0.7
 2.9
1.6
 5.2
0.7
 1.4
-0.9
 2.9
1.4
 0.6
-0.0
 2.5
-0.4
 4.2
31 HDLBP high density lipoprotein binding protein 395984 4.4 2.2
 1.9
 0.7
 2.8
 3.9
 1.4
 3.2
 0.5
 2.1
 3.5
 3.8
 1.0
 1.9
 0.8
 2.9
 1.1
 3.3
 2.5
 1.3
-1.7
 4.4
-1.5
 3.0
-1.4
 2.1
 1.1
32 COPB1 coatomer protein complex subunit beta 1 423063 4.4 2.5
 1.6
 1.3
 0.7
 1.8
 2.1
 2.0
 1.6
 2.3
 1.4
 3.1
 0.7
 0.7
 0.5
 -0.1
 2.2
 1.7
 1.1
 0.9
 6.9
 0.6
 0.3
 0.2
33 ZFP36L2 ZFP36 ring finger protein like 2 107052930 4.4 2.4
1.6
1.4
 0.8
-1.0
 0.5
-1.0
 -0.2
-2.2
 1.4
0.1
 0.5
-1.1
 0.5
-1.5
 1.5
1.2
 0.6
-0.2
 1.9
1.4
 1.4
0.9
 -0.2
-0.8
 1.2
-0.8
 0.2
-0.8
 0.3
-1.0
 -0.5
-0.7
 1.4
0.6
 0.3
 1.3
1.3
 0.9
 -0.2
-0.5
34 ERP29 endoplasmic reticulum protein 29 416882 4.4 2.8
 1.3
 0.5
 2.6
 1.5
 -0.9
 2.1
 0.4
 5.5
 2.9
 4.4
 0.3


-1.1
 1.5
 2.9


0.1
35 SND1 staphylococcal nuclease and tudor domain containing 107050735 4.3 2.3
0.5
 4.7
 2.2
 0.1
 2.1
 0.6
 3.3
 1.8
 4.5
 -0.0
 3.2
 1.0
 3.4
 -0.5
 1.5
 3.5
 1.5
 3.7
 3.0
 2.4
 0.5
36 COL1A2 collagen type I alpha 2 chain 396243 4.2 2.1
 1.8
 3.3
1.2
 1.2
0.9
 2.3
2.1
 1.3
1.2
 1.4
1.2
 2.7
2.0
 1.4
0.4
 2.3
2.1
 1.0
0.5
 2.7
2.5
 0.9
0.6
 1.2
0.9
 1.4
0.9
 2.8
1.8
 1.6
0.8
 0.3
0.2
 4.1
2.5
 2.7
2.4
 2.3
2.1

37 ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase 417181 4.2 2.2
 1.8
 2.0
 2.0
 2.3
 0.8
 1.1
 0.0
 -0.6
 1.6
 2.0
 0.6
 1.9
 0.7
 2.9
 -1.0
 -0.4
 0.8
 0.9
 1.8
 1.3
 -0.8
 -0.3
38 HYOU1 hypoxia up-regulated 1 428251 4.2 2.6
 1.4
 1.6
 4.9
 3.2
 0.9
 3.1
 0.0
 4.4
 1.5
 3.9
 0.1
 5.0
 0.6
 5.8
 0.1
 3.0
 3.0
 1.0
 4.5
 1.1
 1.2
 1.6
0.2
39 P3H4 prolyl 3-hydroxylase family member 4 (inactive) 430099 4.2 2.4
 1.6
 3.4
3.3
 4.3
4.0
 5.4
3.5
 2.2
0.7
 3.3
2.5
 4.2
2.5
 5.0
2.1
 2.7
1.5
 3.6
2.4
 1.9
1.2
 1.8
1.7
 1.0
0.8
 1.3
-0.3
 2.9
1.4
 4.7
2.3
 4.3
3.6
 3.8
2.9
 3.8
1.7
 5.6
3.3
7.1
40 RRBP1 ribosome binding protein 1 396414 4.2 2.6
 1.4
 2.8
 5.9
 5.8
 1.9


2.9
 3.2
 0.5
 6.4
 -0.2
 5.1
 2.1
 5.6
 4.8
 1.5
 3.2
 3.1

41 PCYOX1 prenylcysteine oxidase 1 426297 4.2 2.1
 1.8
 0.2
 2.4
 4.9
 1.0
 2.7
 -0.4
 3.2
 1.7
 -0.6
 1.3
 3.3
 0.2
 1.1
 2.0
 2.7
 2.3
 1.7
 1.6
 1.9

42 COPA coatomer protein complex subunit alpha 426906 4.2 2.1
 1.8
 0.6
 3.3
 3.6
 1.7
 1.9
 0.6
 2.4
 2.6
 4.1
 0.5
 2.5
 0.8
 2.8
 1.8
 2.7
 1.8
 1.4
 7.1
 1.2
 0.8
 0.7
43 PLA2R1 phospholipase A2 receptor 1 404304 4.2 2.0
 1.9
 2.2
0.6
 2.3
0.2
 3.2
-0.8
 1.6
-0.4
 1.7
0.3
 2.6
0.8
 0.6
0.2
 3.2
2.5
 1.6
1.1
 2.6
1.2
 2.3
0.4
 1.8
1.6
 0.7
0.0
 2.4
2.4
 2.8
0.1
 1.3
-0.0
 2.9
1.5
 1.9
1.8
 2.3
1.3

44 TXNDC5 thioredoxin domain containing 5 420867 4.2 2.0
 1.9
 1.3


2.2
 0.4
 3.7
 3.0
 3.3
 -0.8
 2.6
 0.4
 3.0
 1.8
 2.2
 3.1
 1.3
 3.8
 1.6
 1.4
45 COL18A1 collagen, type XVIII, alpha 1 373978 4.1 3.2
 0.7
 2.0
 1.2
 2.5
 0.5
 1.9
 1.5
 0.8
 3.3
 2.4
 1.7
 1.6
 -0.5
 1.7
 -1.1
 1.0
 0.0
 4.5
1.8
 2.7
-0.1
 3.9
0.5

46 FNDC3B fibronectin type III domain containing 3B 424984 4.1 2.3
 1.5
 3.2
2.6
 2.7
1.3
 4.9
1.3
 3.8
-0.1
 3.4
0.5
 1.4
1.3
 4.6
2.6
 2.7
0.3
 2.4
1.7
 2.2
1.2
 1.7
1.1
 2.0
0.8
 1.7
0.0
 3.8
-1.1
 2.1
0.5
 3.7
0.9
 3.6
2.8
 3.3
2.5
 4.0
2.9
 -0.0
 2.8
47 CD164 CD164 molecule 395380 4.1 2.6
 1.3
 1.8
 2.1
 2.3
 2.0
 2.3
 0.7
 2.3
 2.5
 1.8
 1.3
 -1.1
 0.4
 0.7
 1.3
 0.2
 1.2
 2.7
 1.6
 2.0
 0.1
48 DHTKD1 dehydrogenase E1 and transketolase domain containing 1 426076 4.0 1.3
 2.5
 0.5
 -0.5
 0.7
 -0.9
 -0.1
 0.2
 -0.6
 -0.9
 0.8
 -0.1
 -0.2
 -0.2
 -1.2
 -0.6
 -1.8
 -2.0
 0.9
 -1.0
 0.4
 1.6
 -0.9
49 GLG1 golgi glycoprotein 1 396492 4.0 2.5
 1.3
 0.7
 4.2
 5.7
 1.1
 4.3
 2.3
 3.6
 1.2
 1.2
 0.4
 2.5
 0.7
 2.0
 1.8
 1.9
 1.3
 0.7
 2.7
 2.6
 1.3
 1.0
50 LONP1 lon peptidase 1, mitochondrial 768942 4.0 1.6
 2.1
 0.4
 2.2
 2.4
 1.1
 2.0
 1.1
 3.1
 2.0
 2.1
 0.6
 2.1
 -0.0
 2.4
 1.2
 2.5
 2.8
 0.3
 -0.0
 1.9
 0.9
 0.5
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