Orthologous genes in OrthoFinder**

Species Gene Description
 gga-u.3   EPYC   epiphycan 
 gga-r.3   EPYC   epiphycan 
 gga-m.5   EPYC   epiphycan 
 gga-u.3   OPTC   opticin 
 mmu-u.4   Epyc   epiphycan 
 rno-u.3   Epyc   epiphycan 
 rno-u.3   Optc   opticin 
 cfa-u.3   EPYC   epiphycan 
 dre-u.3   epyc   epiphycan 
 dre-u.3   ogna   osteoglycin, paralog a 
 dre-u.3   optc   opticin 
 spo-u.3   cit1   citrate synthase Cit1 

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Top 50 coexpressed genes to EPYC (gga-u.3 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 gga4512   ECM-receptor interaction  3 80 2.70
 gga910   Nitrogen metabolism  1 17 -
 gga532   Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate  1 19 -
 gga4510   Focal adhesion  3 191 -
 gga4010   MAPK signaling pathway  1 260 -

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gga:EPYC (epiphycan) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
UMAP
Gene Function KEGG Entrez
Gene
ID		 Other ID LINK Target Reference

gga-u.3
for
EPYC
gga-r.3
for
EPYC
gga-m.5
for
EPYC
gga-u.3
for
OPTC
mmu-u.4
for
Epyc
rno-u.3
for
Epyc
rno-u.3
for
Optc
cfa-u.3
for
EPYC
dre-u.3
for
epyc
dre-u.3
for
ogna
dre-u.3
for
optc
spo-u.3
for
cit1
1 SUSD5 sushi domain containing 5 420721 4.5 2.5
0.6
 3.8
 0.6
 1.1
 -0.1
 2.8
 -0.5
 1.3
2 MATN1 matrilin 1, cartilage matrix protein 396505 4.2 1.1
 2.9
 2.9
1.5
 3.2
2.2
 2.2
2.1
 1.0
-0.3
 1.6
1.4
 8.5
5.8
 3.6
3.3
 -0.2
-0.3
 0.1
-0.3
3 CLEC3A C-type lectin domain family 3 member A 425961 3.8 2.0
 1.6
 1.7
-0.1
 6.3
1.9
 2.9
1.4
 1.8
0.7
 2.7
0.6
 0.4
-1.5
 2.4
0.4
 -0.5
-0.6
 -2.0
4 MATN3 matrilin 3 395954 3.8 1.7
 1.8
 2.9
1.5
 3.2
2.2
 2.2
2.1
 1.0
-0.3
 1.6
1.4
 8.5
5.8
 3.6
3.3
 -0.2
-0.3
 0.1
-0.3
5 COL9A1 collagen type IX alpha 1 chain 771873 3.7 1.1
 2.3
 1.3
 4.6
 1.8
 -0.2
 2.1
 3.7
1.1
 4.6
2.4
 -0.8
-1.1
6 LOC101751432 uncharacterized LOC101751432 101751432 3.6 1.9









7 C17orf67 C17orf67 homolog 417400 3.5 1.3
 2.0
 0.3



3.6
 0.2
 -0.3
8 COL9A3 collagen type IX alpha 3 chain 396242 3.2 1.0
 1.9
 1.9
 1.2
 1.4
 1.2
 1.3
 9.2
 2.4
 1.3
9 PIEZO2 piezo type mechanosensitive ion channel component 2 421052 3.1 1.3
 1.6
 0.6
0.0
 0.3
-0.6
 2.3
-0.1
 -0.2
-0.3
 0.9
-1.4
 1.0
0.1
 0.8
0.1
 0.1
-0.1
10 CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 422488 3.1 0.8
 2.1
 0.2
-0.6
 0.8
0.5
 0.8
-0.0
 0.6
0.3
 0.9
 1.9
-0.0
 0.9
-0.9
 0.2
-1.0
11 COL22A1 collagen type XXII alpha 1 chain 420315 3.0 1.4
 1.5
 1.7
 1.0
 -0.0
 0.7
 1.9
 3.0
 2.4
 -0.7
12 KERA keratocan 373995 3.0 1.7
 1.1
 2.3
2.1
 10.9
5.4
 4.0
3.8
 4.9
2.8
 4.3
3.8
 8.5
3.2
 5.4
5.2
 4.2
1.6
13 CD109 CD109 molecule 421862 2.9 1.2
 1.6
 -0.1
 1.3
 0.2
 0.9
 0.7
 1.3
 0.4
 -1.1
 0.7
14 LOC121108267 uncharacterized LOC121108267 121108267 2.9 1.6









15 LOC121111311 uncharacterized LOC121111311 121111311 2.8 1.6









16 TSHZ3 teashirt zinc finger homeobox 3 415762 2.8 1.6
 1.1
 1.0
 -0.5
 -0.1
 0.2
1.3
-0.7
 0.2
-0.3
 0.1
-1.1
17 EGFLAM EGF like, fibronectin type III and laminin G domains 427445 2.8 1.5
0.5
 0.2
 0.2
 0.5
 2.5
 0.0
 0.2
 -0.2
18 PTPN5 protein tyrosine phosphatase, non-receptor type 5 423085 2.8 1.1
 1.5
 -0.7
 -0.3
 0.3
 -1.1
 1.1
 -1.0
 -1.0
 -0.2
19 NKX2-3 NK2 homeobox 3 107053698 2.8 1.5
-1.4
 -1.4


0.7
 1.1
 0.3
20 OCM1 oncomodulin 1 386586 2.8 -0.0
 2.6
 -0.5
0.6
 -0.3
1.4
0.7
 1.3
-0.4
 0.1
-1.2
 -1.1
21 SSPN sarcospan 418211 2.8 1.5
1.4
 0.2

0.9
 1.8
 2.0
 -0.6
22 LOC112530078 translation initiation factor IF-2-like 112530078 2.7 1.5









23 CPXM1 carboxypeptidase X, M14 family member 1 100858707 2.7 1.5
2.1
 2.0
 0.9
 -0.5
 1.1
 2.6
 1.6
 -2.2
24 LOC107056412 membrane-spanning 4-domains subfamily A member 12-like 107056412 2.7 1.5
1.3







25 COL2A1 collagen type II alpha 1 chain 395069 2.7 1.3
 1.3
 2.0
1.1
 2.3
1.3
 1.5
1.4
 1.3
0.5
 1.4
1.2
 8.7
8.7
 5.0
4.6
 3.0
1.6
 0.6
-0.0
26 CA8 carbonic anhydrase 8 421139 2.7 1.4
 1.2
 1.1
 -1.4
 -0.2
 0.4
 1.0
 -0.8
 1.1
 1.0
27 TMEM263 transmembrane protein 263 418068 2.7 0.9
 1.6
 -0.2
 1.5
 0.4
 -0.6
 0.8
 -1.4
 0.3
 -0.1
28 GNAZ G protein subunit alpha z 770226 2.7 1.1
 1.4
 1.0
0.6
 0.1
0.1
 0.7
0.6
 2.9
2.8
 0.8
0.2
 1.7
0.9
 1.5
1.3
 1.2
1.2
29 NCAM2 neural cell adhesion molecule 2 427968 2.6 1.4
 1.1
 0.7
0.4
 1.8
-0.3
 0.5
0.2
 -1.3
-1.3
 0.9
0.9
 1.3
0.5
 0.3
0.1
 1.1
0.8
30 GDF9 growth differentiation factor 9 404533 2.6 0.8
 1.6
 -0.6
 0.5

-0.7
 -1.0
 -0.4
 0.7
31 C2orf40 C2orf40 homolog 771055 2.6 1.5
 0.9
 1.5
 4.0
 0.2
 1.2
 1.6
 2.6
1.2
 5.8
1.6
 1.7
-1.4
32 PPP1R17 protein phosphatase 1 regulatory subunit 17 420753 2.6 1.6
 0.9
 0.5
 -0.2
 1.2
 0.6
1.2
 0.4
 -0.1
33 LBFABP liver basic fatty acid binding protein 395345 2.6 1.0
 1.5
 -0.3



-0.2
 0.6
 -1.0
 0.4
34 SLITRK6 SLIT and NTRK like family member 6 418797 2.6 1.1
 1.4
 -2.1
 2.5
 0.5
 0.2
 1.1
 -1.0
 1.6
 0.1
35 TNMD tenomodulin 404530 2.6 1.9
 0.5
 1.1
 7.8
 1.9
 0.1
 0.8
 1.9
 4.1
 -1.0
36 LOC112532644 steroidogenic acute regulatory protein, mitochondrial-like 112532644 2.6 1.4
0.3
0.2
 -0.0
-0.4
 0.1
-0.2
 1.4
-0.7
 0.7
0.0
 1.5
-0.1
 1.0
0.2
 -0.8
-1.0
 1.6
1.1
37 GNB3 G protein subunit beta 3 427945 2.6 1.5
 0.9
 1.7
0.0
 1.0
0.4
 0.7
0.6
 1.9
-0.2
 1.0
-0.2
 2.2
2.0
 0.4
0.4
 0.7
0.5
38 HTRA3 HtrA serine peptidase 3 422868 2.6 1.8
 0.7
 1.1
-0.6
 1.3
0.2
 1.4
0.1
 1.3
0.6
 0.2
0.2
 2.2
1.1
 4.3
3.5
 0.6
-0.3
39 LOC101750994 uncharacterized LOC101750994 101750994 2.5 1.4









40 TWIST2 twist family bHLH transcription factor 2 395405 2.5 1.3
 1.1
 0.7
-0.6
 2.9
2.5
 1.9
0.5
 0.9
0.1
 0.8
0.6
 1.7
1.2
 5.1
4.0
 1.5
0.3
41 LOC107053812 uncharacterized LOC107053812 107053812 2.5 1.4









42 WDCPL WD repeat and coiled coil containing like 770429 2.5 1.4
1.4
0.7
 -0.1
 0.1
 -0.9
0.4
 -0.4
 0.9
43 LOC107052642 uncharacterized LOC107052642 107052642 2.5 1.4









44 LUM lumican 417891 2.5 2.3
 0.2
 2.3
2.1
 10.9
5.4
 4.0
3.8
 4.9
2.8
 4.3
3.8
 8.5
3.2
 5.4
5.2
 4.2
1.6
45 MFAP2 microfibrillar associated protein 2 100858555 2.5 1.4
2.5
 1.2
 0.4
 0.2
 1.3
 2.1
 2.4
 1.2
46 WWTR1 WW domain containing transcription regulator 1 100859902 2.5 1.4
1.0
0.2
 -0.1
-0.4
 -0.0
-0.9
 0.6
-0.2
 1.1
-0.5
 0.6
-1.1
 -0.2
-0.5
 1.0
0.7
47 ADAMTS3 ADAM metallopeptidase with thrombospondin type 1 motif 3 428760 2.5 0.8
 1.6
 0.3
 2.4
 1.0
 0.2
 2.1
 1.0
 0.1
 1.8
48 DPT dermatopontin 768904 2.5 1.4
-1.2
 2.2
 -0.2
 0.8
 0.1
 -0.3
 2.1
 -0.5
49 LOC101750098 uncharacterized LOC101750098 101750098 2.5 1.4









50 LOC769510 uncharacterized LOC769510 769510 2.5 1.4
-0.2
 2.0
 -0.4
 1.0
-1.7
 1.4
 1.0
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