Orthologous genes in OrthoFinder**

Species Gene Description
 gga-u.3   FOXD1   forkhead box D1 
 gga-r.3   FOXD1   forkhead box D1 
 gga-m.5   FOXD1   forkhead box D1 
 gga-u.3   FOXI3   forkhead box I3 
 hsa-u.4   FOXI3   forkhead box I3 
 mcc-u.3   FOXG1   forkhead box G1 
 cfa-u.3   FOXL2   forkhead box L2 
 cfa-u.3   FOXS1   forkhead box S1 
 dre-u.3   foxg1d   forkhead box G1d 
 cel-u.3   fkh-10   Fork-head domain-containing protein 
 cel-u.3   lin-31   Protein lin-31 
 cel-u.3   pes-1   Fork-head domain-containing protein 
 sce-u.3   HCM1   Hcm1p 
 sce-u.3   FKH2   forkhead family transcription factor FKH2 
 sce-u.3   FKH1   forkhead family transcription factor FKH1 

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Top 50 coexpressed genes to FOXD1 (gga-u.3 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 gga4350   TGF-beta signaling pathway  2 92 -
 gga4110   Cell cycle  1 118 -
 gga4068   FoxO signaling pathway  1 122 -
 gga230   Purine metabolism  1 125 -
 gga4080   Neuroactive ligand-receptor interaction  1 343 -

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gga:FOXD1 (forkhead box D1) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
UMAP
Gene Function KEGG Entrez
Gene
ID		 Other ID LINK Target Reference

gga-u.3
for
FOXD1
gga-r.3
for
FOXD1
gga-m.5
for
FOXD1
gga-u.3
for
FOXI3
hsa-u.4
for
FOXI3
mcc-u.3
for
FOXG1
cfa-u.3
for
FOXL2
cfa-u.3
for
FOXS1
dre-u.3
for
foxg1d
cel-u.3
for
fkh-10
cel-u.3
for
lin-31
cel-u.3
for
pes-1
sce-u.3
for
HCM1
sce-u.3
for
FKH2
sce-u.3
for
FKH1
1 FOXD2 forkhead box D2 395795 5.4 3.5
 1.5
 2.2
1.6
 3.3
3.1
 -0.5
-0.9
 3.8
3.3
 1.8
1.6
 4.7
4.4
 2.1
0.6
 1.7
0.8
 3.7
1.8
 1.0
0.5
 3.9
1.0
 3.9
0.5
2 NKX6-1 NK6 homeobox 1 395752 4.8 1.8
 2.6
 2.5
1.2
 2.0
0.6
 -0.2

1.6
1.5
 2.9
 2.6
 1.5


3 FOXC2 forkhead box C2 396039 4.5 2.1
 2.1
 -1.2
 1.3
1.5
 2.3
 -0.8





4 ZIC1 Zic family member 1 374103 4.2 1.9
 2.0
 1.2
1.1
 6.4
3.8
 2.7
2.3
 2.7
1.8
 -1.2
-1.4
 3.6
3.2
 -0.6
 0.6
 1.3


5 EPHA3 EPH receptor A3 396402 4.1 1.0
 2.8
 1.4
-0.2
 1.2
0.5
 4.7
4.6
 1.3
1.2
 1.1
0.5
 3.9
2.4
 0.5
 1.7
 -0.5


6 PDE9A phosphodiesterase 9A 418538 3.9 2.2
 1.5
 -0.6
 -0.3
 -1.0

1.4
0.5





7 FOXC1 forkhead box C1 395856 3.9 1.4
 2.2
 2.2
1.6
 3.3
3.1
 -0.5
-0.9
 3.8
3.3
 1.8
1.6
 4.7
4.4
 2.1
0.6
 1.7
0.8
 3.7
1.8
 1.0
0.5
 3.9
1.0
 3.9
0.5
8 OLIG2 oligodendrocyte lineage transcription factor 2 428612 3.8 1.7
 1.9
 2.9
 1.3
 1.7

1.8





9 TMEM171 transmembrane protein 171 427220 3.3 1.2
 2.0
 -0.5
 0.1
 -0.4
 0.4
 -1.2






10 TWIST1 twist family bHLH transcription factor 1 395491 3.3 1.7
 1.4
 0.7
-0.4
 1.2
0.4
 -0.0
-0.6
 1.0
-1.4
 0.3
-0.3
 2.9
1.1
 1.8
 1.0
 -0.4


11 POU3F2 POU class 3 homeobox 2 107053103 3.3 1.8
3.4
1.9
 2.3
2.1
 3.6
2.1
 2.5
1.4
 -0.4
-0.6
 4.2
2.8
 0.8
-0.2
 3.4
0.9
 0.5
0.3


12 IRX1 iroquois homeobox 1 374185 3.2 1.2
 1.8
 1.1
 1.7
 0.5
 2.3
 -0.8
 0.9





13 DLX6 distal-less homeobox 6 772070 3.2 1.2
 1.8
 1.6
1.6
 3.6
2.6
 5.8
 2.1
 0.4
 3.6
2.5
 0.6
 -0.8
 -0.1


14 OPTC opticin 395130 3.1 1.1
 1.9
 1.5
-0.3

-1.3
 0.0
 2.3
0.4





15 PAX1 paired box 1 100859138 3.1 1.7
0.8
 1.3


1.1
0.8
 -0.7
 0.2
 0.5


16 TIMP4 TIMP metallopeptidase inhibitor 4 768711 3.0 1.0
 1.9
 -0.6
-1.2
 -0.4
-0.7
 0.2
-0.0
 0.9
0.2
 2.1
0.8
 0.4
-0.1
 0.0
 -0.9
 -0.5


17 HOXB9 homeobox B9 771865 3.0 1.3
 1.5
 -0.1
-0.2
 0.8
0.7
 1.0
0.9
 3.2
2.5
 0.9
0.9
 0.0
-0.2
 -0.7
 0.7
 0.3


18 LMO4 LIM domain only 4 373901 3.0 1.3
 1.6
 -0.6
 -0.2
 -0.2
 -1.1
 1.3
 0.8
0.4





19 NOG noggin 373912 3.0 1.0
 1.8
 0.3
 0.2
 1.1
 0.8
 -0.2
 1.6
0.6





20 NKX3-2 NK3 homeobox 2 373932 2.9 1.5
 1.2
 1.1

0.3
 -0.1
 0.8
-0.4





21 COCH cochlin 395779 2.8 0.6
 2.0
 -0.4
 0.7
 0.7
 -0.7
 0.7
 -1.5





22 HOMER1 homer scaffolding protein 1 427181 2.8 0.7
 2.0
 -0.7
-1.1
 0.6
0.2
 -1.2
-1.4
 0.4
0.1
 1.5
0.6
 0.7
0.2





23 SOX1 SRY-box 1 374240 2.8 0.8
 1.8
 2.5
1.3
 5.2
3.0
 5.6
4.1
 1.6
0.7
 1.7
1.5
 2.2
2.1
 2.0
1.6
 1.8
1.6
 0.2
0.1
 0.7
 0.9
 1.1
24 TLL1 tolloid like 1 395441 2.8 0.7
 2.0
 1.1
0.8
 1.1
-1.2
 0.3
-0.7
 0.2
-0.7
 1.6
-0.1
 -0.2
-1.1
 0.3
 0.4
 -0.2


25 LOC121109727 uncharacterized LOC121109727 121109727 2.8 1.5












26 LOC107053870 translation initiation factor IF-2-like 107053870 2.8 1.5












27 NTN1 netrin 1 396389 2.7 1.1
 1.5
 0.2
-0.0
 1.0
 -2.0
 -0.3
 -0.0
 0.1
-0.9
 0.6
 2.0
 0.9


28 HOXD9 homeobox D9 771214 2.7 1.5
-0.1
-0.2
 0.8
0.7
 1.0
0.9
 3.2
2.5
 0.9
0.9
 0.0
-0.2
 -0.7
 0.7
 0.3


29 RUNDC3B RUN domain containing 3B 420535 2.7 0.9
 1.6
 -0.8
 -0.5
 0.6
 0.2
 -1.5
 -1.5





30 HES5 hes family bHLH transcription factor 5 419392 2.7 1.1
 1.4
 0.5
0.2
 0.2
 2.0

1.9
1.5





31 PLXDC2 plexin domain containing 2 420511 2.7 1.2
 1.4
 -0.7
-0.9
 0.8
-0.7
 -0.4
-1.4
 1.8
-1.0
 0.6
-0.0
 1.1
-1.7
 -0.3
 -0.7
 -0.4


32 POU3F3 POU class 3 homeobox 3 107051987 2.7 1.5
3.4
1.9
 2.3
2.1
 3.6
2.1
 2.5
1.4
 -0.4
-0.6
 4.2
2.8
 0.8
-0.2
 3.4
0.9
 0.5
0.3


33 STEAP1 STEAP family member 1 420540 2.7 1.1
 1.4
 0.4
 -0.7
 -0.6
 -1.1
 -1.6






34 ID4 inhibitor of DNA binding 4, HLH protein 374150 2.7 1.3
 1.2
 0.9
0.6
 1.6
0.7
 -0.1
-0.2
 1.0
-0.3
 1.5
0.5
 1.2
0.3





35 CDKN1C cyclin dependent kinase inhibitor 1C 101751827 2.7 1.5
0.2
 -0.2
 -0.2
 -0.4
 1.3
 0.6
0.6
 0.7
 0.7
 0.4


36 DLX5 distal-less homeobox 5 373969 2.6 0.7
 1.8
 1.6
 2.8
 3.5
 2.5
 1.5
 0.8
 0.9
 1.3
 0.4


37 HHIP hedgehog interacting protein 422460 2.6 1.1
 1.4
 -0.8
 -0.5
 0.8
 -1.0
 -0.2
 -0.6





38 HOXA13 homeobox A13 373934 2.6 1.7
 0.8
 0.2
 1.4
1.9
 -0.4
 2.2
0.6





39 PAX6 paired box 6 395943 2.6 0.8
 1.6
 1.3
 0.7
 0.4
 2.2
 0.0
 4.3
3.1
 1.4
 0.5
 -0.1


40 LOC121112220 uncharacterized LOC121112220 121112220 2.6 1.4












41 NDNF neuron-derived neurotrophic factor 422672 2.6 1.2
 1.3
 -0.4
 -0.4
 -0.7
 0.8
 -0.6
 1.6





42 CYTL1 cytokine like 1 422849 2.6 1.2
 1.3
 -0.2
 -0.8
-0.6
 -0.2
 0.6





43 NCAN neurocan 395493 2.6 0.7
 1.7
 0.6
 1.4
 2.3
 1.0
 -0.9
 0.6
-0.1





44 FAM118B family with sequence similarity 118 member B 419714 2.6 0.6
 1.8
 -1.7
 -0.4
 0.3
 -0.5
 -0.4
 -0.1





45 FOXF2 forkhead box F2 100857760 2.5 1.4
0.3
-0.3
 1.3
0.8
 2.3
1.5
 3.1
3.1
 0.0
-1.1
 1.9
1.8
 3.0
 -0.4
 1.1


46 C11orf96 C11orf96 homolog 770209 2.5 0.9
 1.5
 -1.1
 0.4
 0.1
 1.5
 3.4






47 CNP 2',3'-cyclic nucleotide 3' phosphodiesterase 395921 2.5 0.9
 1.5
 0.6
 -0.9
 -1.3
 0.7
 1.5
 0.4
 0.2
 -0.9
 0.1


48 ADCYAP1 adenylate cyclase activating polypeptide 1 408251 2.5 0.5
 1.9
 1.1
 0.1
 1.6

1.2
0.6





49 LOC121110423 uncharacterized LOC121110423 121110423 2.5 1.4












50 CBY1 chibby family member 1, beta catenin antagonist 771364 2.5 0.7
 1.6
 -0.6
 -0.7
 -0.7
 0.3
 0.8
 0.5





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