Orthologous genes in OrthoFinder**

Species Gene Description
 dre-u.3   pms2   PMS1 homolog 2, mismatch repair system component 
 dre-r.3   pms2   PMS1 homolog 2, mismatch repair system component 
 hsa-u.4   PMS2   PMS1 homolog 2, mismatch repair system component 
 rno-u.3   Pms2   PMS1 homolog 2, mismatch repair system component 
 gga-u.3   PMS2   PMS1 homolog 2, mismatch repair system component 
 mcc-u.3   PMS2   PMS1 homolog 2, mismatch repair system component 
 cfa-u.3   PMS2   PMS1 homolog 2, mismatch repair system component 
 dme-u.3   Pms2   Pms2 
 cel-u.3   pms-2   PMS (Post Meiotic Segregation) family 
 sce-u.3   PMS1   ATP-binding mismatch repair protein 
 spo-u.3   SPCC330.06c   putative thioredoxin peroxidase 

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Top 50 coexpressed genes to pms2 (dre-u.3 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 dre3030   DNA replication  4 38 5.65
 dre3460   Fanconi anemia pathway  4 49 5.20
 dre3440   Homologous recombination  3 37 3.99
 dre4110   Cell cycle  3 153 2.20
 dre3410   Base excision repair  2 37 2.43

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dre:pms2 (PMS1 homolog 2, mismatch repair system component) External Links;


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Show Coexpressed Genes
UMAP
Gene Function KEGG Entrez
Gene
ID		 Other ID LINK Target Reference

dre-u.3
for
pms2
dre-r.3
for
pms2
hsa-u.4
for
PMS2
rno-u.3
for
Pms2
gga-u.3
for
PMS2
mcc-u.3
for
PMS2
cfa-u.3
for
PMS2
dme-u.3
for
Pms2
cel-u.3
for
pms-2
sce-u.3
for
PMS1
spo-u.3
for
SPCC330.06c
1 haus6 HAUS augmin-like complex, subunit 6 558814 9.6 5.0
 1.7
3.5
 0.7
 1.2
 4.3


2 fancg FA complementation group G 402936 7.5 3.9
 0.6
 1.0
 1.4
 -0.7
 1.8



3 mutyh mutY DNA glycosylase 558403 7.1 3.7
 -0.0
 2.9
 1.0
 0.8
 2.7



4 tinf2 TERF1 (TRF1)-interacting nuclear factor 2 566362 6.4 3.4
 -0.7
 2.5
 -0.5
 0.4
 -0.3



5 top3a DNA topoisomerase III alpha 560212 6.3 3.3
 2.6
 1.7
 0.8
 2.0
 0.4
 3.4
 0.8
 2.2
 0.9
6 fancd2 FA complementation group D2 394241 6.3 3.3
 1.3
 2.9
 1.2
 0.0
 0.5
 6.7
 2.6
0.4
7 men1 multiple endocrine neoplasia I 30130 6.2 3.3
 1.7
 0.6
-0.3
 1.2
 1.1


8 dnmt1 DNA (cytosine-5-)-methyltransferase 1 30430 6.2 3.2
 -0.5
 2.7
 -0.6
 0.7
 3.5


1.7
9 mtbp MDM2 binding protein 100534898 6.1 3.2
 1.6
 2.6
 3.6
 1.8
 3.5



10 dnmt3bb.3 DNA (cytosine-5-)-methyltransferase beta, duplicate b.3 323723 5.9 3.1








11 zufsp zinc finger containing ubiquitin peptidase 1 562478 5.7 3.0
 0.3
 2.7
 2.0
 0.8
 2.3



12 cep57l1 centrosomal protein 57, like 1 445312 5.6 2.9








13 pola2 polymerase (DNA directed), alpha 2 322059 5.5 2.9
 1.1
 3.0
 0.6
 0.9
 1.3
 1.7
 1.1
 9.1
14 atad5b ATPase family AAA domain containing 5b 321619 5.4 2.9
 0.4
 3.5
 3.9
 -0.4
 1.8
 1.3
7.0
15 zgc:112083 zgc:112083 550461 5.4 2.9
 0.9
 2.2
 -1.0
 -0.4
 -0.3
 0.6
 -0.4
 1.0
16 rbbp8 retinoblastoma binding protein 8 503536 5.4 2.8
 0.3
 0.2
 1.2
 -0.6
 1.0



17 rfc1 replication factor C (activator 1) 1 100037336 5.4 2.8
 1.4
 1.7
 3.5
 1.9
 2.5
 2.5
 2.9
 0.7
18 cep162 centrosomal protein 162 562035 5.3 2.8
 1.1
 2.7
 2.9
 0.4
 1.3
 -1.2


19 orc1 origin recognition complex, subunit 1 554509 5.3 2.8
 0.8
 0.7
 3.1
 0.2
 1.1
 1.5
 3.7
 2.4
20 rad18 RAD18 E3 ubiquitin protein ligase 393106 5.3 2.8
 0.4
 0.9
 2.0
 1.3
 2.2

-0.2
 0.7
21 cdc7 cell division cycle 7 homolog (S. cerevisiae) 492768 5.2 2.7
 0.4
 2.7
 2.1
 -0.0
 2.5
 0.9
0.2
2.4
 0.2
22 trmt12 tRNA methyltransferase 12 homolog 564925 5.2 2.7
 2.2
 2.3
 0.1
 1.2
 1.3
-0.2
 0.4
 0.4
23 zw10 zw10 kinetochore protein 393110 5.2 2.7
 0.7
 1.3
 2.2
 0.1
 1.3
 0.2
 1.1

24 dna2 DNA replication helicase/nuclease 2 559535 5.2 2.7
 0.4
2.7
 0.0
 1.9
 2.7
 2.3
 1.7
25 setdb1a SET domain bifurcated histone lysine methyltransferase 1a 553292 5.2 2.7
 2.6
 3.1
 -0.6
 0.1
 2.2
 1.9

0.2
26 lrrc42 leucine rich repeat containing 42 326793 5.1 2.7
 -0.1
 0.3
 2.1
 0.9
 -0.6



27 npat nuclear protein, ataxia-telangiectasia locus 552973 5.0 2.7
 0.2
 1.8
 2.3
 1.1
 2.3



28 gcfc2 GC-rich sequence DNA-binding factor 2 559280 5.0 2.6
 0.6
0.2
 3.0
2.4
 4.6
4.5
 0.6
0.1
 3.3
 1.8
 2.6
-0.7
29 rtel1 regulator of telomere elongation helicase 1 503732 5.0 2.6
 -0.6
 3.1
 2.7
 -0.3
 1.0
 1.7
 6.2

30 sass6 SAS-6 centriolar assembly protein 406747 5.0 2.6
 0.5
 1.4
 5.1
 -1.6
 1.5
 4.2


31 paxip1 PAX interacting (with transcription-activation domain) protein 1 449658 4.9 2.6
 2.4
 2.7
 2.6
 0.4
 1.3
 -0.6
 1.6
 7.7
 -1.0
32 pold1 polymerase (DNA directed), delta 1, catalytic subunit 556456 4.9 2.6
 -1.6
 3.4
 0.5
 -1.0
 1.2
 5.1
 2.9
 5.3
 0.2
33 tgs1 trimethylguanosine synthase 1 100537552 4.9 2.6
 2.8
 0.5
 3.1
 -0.5
 1.2
1.5
 0.0
 -1.8
34 pot1 protection of telomeres 1 homolog 566847 4.9 2.6
 2.1
 3.6
1.5
 3.1
 -0.8
 0.9



35 haus7 HAUS augmin-like complex, subunit 7 553483 4.9 2.6
 -0.3
 2.6
1.3
 1.4



36 fan1 FANCD2 and FANCI associated nuclease 1 565458 4.9 2.6
 2.6
 2.2
 2.2
 0.9
 0.3
4.5

37 ice2 interactor of little elongator complex ELL subunit 2 100005372 4.8 2.6
 2.0
 1.5
 3.6
 1.6
 1.7



38 mcm8 minichromosome maintenance 8 homologous recombination repair factor 100333576 4.8 2.5
 0.2
 3.7
 1.4
 1.6
 3.6
 1.4


39 c2cd3 C2 domain containing 3 centriole elongation regulator 797081 4.8 2.5
 1.1
 1.0
 1.1
 0.3
 1.5



40 tubgcp2 tubulin, gamma complex associated protein 2 386975 4.7 2.5
 -0.2
 4.1
 1.7
 2.8
1.0
-0.1
3.2
41 ssna1 Sjogren syndrome nuclear autoantigen 1 561124 4.7 2.5
 -1.9
 0.1
 1.2
-1.3
 -0.2
 0.2



42 zgc:162344 zgc:162344 563289 4.7 2.5
1.8
 0.1
 0.3
 -0.2



43 znf983 zinc finger protein 983 560276 4.7 2.5








44 gins2 GINS complex subunit 2 554146 4.7 2.5
 -0.7
 1.7
 1.1
 0.2
 0.4
 -0.8
 1.4
 0.8
45 smarcad1a SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 a 557875 4.7 2.5
 2.1
 2.3
 2.7
 -0.8
 2.7
 3.1
 0.4
 1.1
46 proser3 proline and serine rich 3 334054 4.7 2.5
 -0.2
 1.5
-0.8
 -0.4



47 anapc4 anaphase promoting complex subunit 4 494046 4.7 2.5
 1.9
 4.1
 5.2
 -0.1
 0.6
 3.6
 4.2

48 asf1bb anti-silencing function 1Bb histone chaperone 792029 4.7 2.5
 -0.2
-0.7
 1.7
0.3
 2.7
-0.2
 0.8
-0.2
 1.7
0.7
 -0.1
 0.2
-1.9
 4.4
 -1.0
49 ptpdc1a protein tyrosine phosphatase domain containing 1a 565773 4.6 2.4
 0.1
 1.7
 0.4
 -0.5
 0.2
0.7

50 smyd4 SET and MYND domain containing 4 767654 4.6 2.5
 2.3
 3.6
 2.3
 2.7
 1.0
 3.1
0.1
 3.1
0.1
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