Orthologous genes in OrthoFinder**

Species Gene Description
 dre-u.3   trmt12   tRNA methyltransferase 12 homolog 
 dre-r.3   trmt12   tRNA methyltransferase 12 homolog 
 hsa-u.4   TRMT12   tRNA methyltransferase 12 homolog 
 mmu-u.4   Trmt12   tRNA methyltransferase 12 
 rno-u.3   Trmt12   tRNA methyltransferase 12 
 gga-u.3   TRMT12   tRNA methyltransferase 12 homolog 
 mcc-u.3   TRMT12   tRNA methyltransferase 12 homolog 
 cfa-u.3   TRMT12   tRNA methyltransferase 12 homolog 
 cel-u.3   F40F9.10   tRNA wybutosine-synthesizing protein 2 homolog 
 sce-u.3   TRM12   tRNA(Phe) (4-demethylwyosine(37)-C(7)) aminocarboxypropyltransferase 
 spo-u.3   trm1   N2,N2-dimethylguanosine tRNA methyltransferase 

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Top 50 coexpressed genes to trmt12 (dre-u.3 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 dre3460   Fanconi anemia pathway  3 50 3.60
 dre3420   Nucleotide excision repair  2 44 2.28
 dre270   Cysteine and methionine metabolism  1 57 -
 dre510   N-Glycan biosynthesis  1 60 -
 dre310   Lysine degradation  1 84 -

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dre:trmt12 (tRNA methyltransferase 12 homolog) External Links;


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Show Coexpressed Genes
UMAP
Gene Function KEGG Entrez
Gene
ID		 Other ID LINK Target Reference

dre-u.3
for
trmt12
dre-r.3
for
trmt12
hsa-u.4
for
TRMT12
mmu-u.4
for
Trmt12
rno-u.3
for
Trmt12
gga-u.3
for
TRMT12
mcc-u.3
for
TRMT12
cfa-u.3
for
TRMT12
cel-u.3
for
F40F9.10
sce-u.3
for
TRM12
spo-u.3
for
trm1
1 harbi1 harbinger transposase derived 1 445279 5.8 3.0
 4.1
 2.3
 4.2
 2.3
1.4
 2.3
 -1.1

1.2
2 adat3 adenosine deaminase tRNA specific 3 368634 5.5 2.9
 0.4
 1.5
 2.0
 2.9
1.6
 -0.4
 0.5
 -0.3
3 pcgf1 polycomb group ring finger 1 368900 5.5 2.9
 1.7
 1.4
 2.0
 1.6
 1.4
 2.0


4 poll polymerase (DNA directed), lambda 406697 5.3 2.8
 2.1
-0.3
 2.6
-0.6
 2.2
1.1
 3.8
-1.1
 0.7
0.5
 0.0
-1.1
0.2
5 tyw3 tRNA-yW synthesizing protein 3 homolog (S. cerevisiae) 436884 5.3 2.8
 0.7
 1.9
 2.6
 2.9
 0.4
 1.3
1.0
6 gpn3 GPN-loop GTPase 3 100000326 5.2 2.8
 0.1
 0.4
 3.1
 -0.2
 0.6
 2.4
 0.1
 2.2
 0.3
7 pms2 PMS1 homolog 2, mismatch repair system component 565276 5.2 2.7
 2.2
2.3
 0.1
 1.2
 1.3
 -0.2
 0.4
 0.4
8 thg1l tRNA-histidine guanylyltransferase 1-like 492814 5.2 2.7
 0.6
 2.8
 1.2
 0.1
 1.1
 0.9
2.6
 0.5
9 mrs2 magnesium transporter MRS2 565251 5.1 2.7
 0.9
 -1.2
 1.5
 0.2
 -0.2
 -0.9
0.7
0.2
10 tmem234 transmembrane protein 234 568275 5.1 2.7
 0.4
 0.4
 1.0
 2.4
 0.6
 -1.6
 0.3
-2.0
11 dnlz DNL-type zinc finger 791166 5.0 2.6
 1.2
 1.6
 0.3
 1.4
 0.1
 2.8
 -0.9
 0.3
 0.3
12 trdmt1 tRNA aspartic acid methyltransferase 1 449878 5.0 2.6
 -0.3
 0.1
 0.8
 -2.4
 0.9
 1.0


13 katnbl1 katanin p80 subunit B-like 1 325430 4.9 2.6
 -1.0
 0.0
 2.3
 0.9
 -0.0
 -0.9


14 setdb1a SET domain bifurcated histone lysine methyltransferase 1a 553292 4.9 2.6
 1.7
 1.0
 1.1
 0.1
 1.9
 -0.2

1.6
15 abraxas1 abraxas 1, BRCA1 A complex subunit 449820 4.9 2.6
 0.1
 2.2
0.8
 -2.7
 -1.2


16 pop4 POP4 homolog, ribonuclease P/MRP subunit 553787 4.9 2.6
 2.5
 -0.9
 2.0
 1.0
 1.3
 1.3
 0.3
 4.0
 0.2
17 ap5b1 adaptor related protein complex 5 subunit beta 1 100148772 4.9 2.6
 1.7
 3.5
 1.8
0.2
 -0.4


18 mppe1 metallophosphoesterase 1 550396 4.8 2.5
 1.0
 1.0
 0.1
 0.6
 0.2
 0.6
 -0.3
-1.7
 -0.1
-3.0
19 cinp cyclin-dependent kinase 2 interacting protein 100003640 4.8 2.5
 1.3
 0.3
 3.5
 -1.0
 0.2
 1.4


20 zgc:92907 zgc:92907 436733 4.8 2.5
-0.6
-0.6
 3.0
-0.0
 1.5
 0.1
 0.1
 -0.5
 -0.8
21 sumf1 sulfatase modifying factor 1 553423 4.8 2.5
 0.2
 -0.3
 0.3
 -0.1
 0.4
 -0.9


22 dusp12 dual specificity phosphatase 12 573998 4.8 2.5
 1.0
 1.4
 2.5
 1.5
 0.7
 0.8
 0.2
 1.2
 1.0
23 ccnh cyclin H 541325 4.7 2.5
 1.2
 0.3
 1.2
 -0.3
 3.1
 -0.2
 -0.2
 1.4
 0.4
24 znhit3 zinc finger, HIT-type containing 3 393243 4.7 2.5
 -0.1
 0.8
 3.4
1.2
 3.9
2.6
25 zgc:193801 zgc:193801 564476 4.7 2.5








26 cmtr2 cap methyltransferase 2 406742 4.7 2.5
 2.5
 2.6
 3.2
 0.9
 -0.1
 -0.5
 -0.8

27 zgc:172121 zgc:172121 337599 4.7 2.5





0.1
 1.5
-0.7
28 znf511 zinc finger protein 511 368916 4.6 2.5
 -0.6
 0.1
 2.5
 3.0
 1.3
 0.9


29 mgme1 mitochondrial genome maintenance exonuclease 1 494097 4.6 2.4
 0.7
 1.4
 0.4
 -0.2
 -0.3
 -1.6


30 zgc:153292 zgc:153292 100003014 4.6 2.4
 2.1
-0.2
 1.4
-0.9
 3.6
0.8
 0.1
 0.9
0.4
 0.1
-0.6


31 supv3l1 SUV3-like helicase 570852 4.6 2.4
 1.7
 1.3
 0.4
 0.0
 1.5
 2.4
 0.8
 1.1
32 polr3f polymerase (RNA) III (DNA directed) polypeptide F 394162 4.6 2.4
 3.6
 3.7
 1.4
 0.8
 1.0
 0.0
 0.0
 1.9
 3.5
33 elp3 elongator acetyltransferase complex subunit 3 541509 4.6 2.4
 1.5
 0.6
 1.0
 1.0
 0.4
 -0.1
 0.3
 0.1
34 cep57l1 centrosomal protein 57, like 1 445312 4.6 2.4








35 wdr48b WD repeat domain 48b 334682 4.6 2.4
 1.4
 0.2
 1.1
 -0.3
 0.5
 -1.3
 0.2
 -1.4
36 wdr83 WD repeat domain containing 83 436702 4.5 2.4
 2.0
 2.3
 2.8
-0.1
 1.9
 -0.0

37 rbfa ribosome binding factor A 100037330 4.5 2.4
 0.7
 0.2
 0.6
 1.3
 0.2
 3.3


38 wu:fj13e08 wu:fj13e08 335448 4.5 2.4








39 pus1 pseudouridine synthase 1 494060 4.5 2.4
 1.6
 1.2
 0.5
 2.8
 0.6
 2.7
 -0.7
 0.1
-0.1
 -0.6
40 otulinb OTU deubiquitinase with linear linkage specificity b 100005714 4.5 2.4
 0.3
 1.9
 2.3
 2.3
 1.9
 -1.3


41 harbi2 harbinger transposase derived 2 560936 4.5 2.4
 4.1
 2.3
 4.2
 2.3
1.4
 2.3
 -1.1

1.2
42 jmjd4 jumonji domain containing 4 767690 4.4 2.3
 1.9
 3.0
 2.8
 -0.3
 1.5
 1.4
 -0.3

43 znhit6 zinc finger HIT-type containing 6 100332549 4.4 2.3
 0.5
 0.3
 1.9
 2.1
 1.0
 1.4
 0.7
 1.7
 1.1
44 gcfc2 GC-rich sequence DNA-binding factor 2 559280 4.4 2.3
 0.0
-1.4
 -0.7
 1.5
0.6
 0.8
0.3
 -0.2
-1.2
 0.0
 0.4
2.6
45 taf1b TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B 449647 4.4 2.3
 -0.5
 -0.1
 2.9
 0.4
 -0.9
 0.3


46 mrm1 mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae) 563095 4.4 2.3
 1.2
 2.0
2.6
 1.7
 1.4
 -0.2
 0.7
 0.9
47 ercc4 excision repair cross-complementation group 4 327322 4.3 2.3
 2.4
 2.0
 0.4
 -1.1
 0.6
 -0.3
 -0.4
 0.8
 -0.3
48 mkks MKKS centrosomal shuttling protein 393134 4.3 2.3
 1.9
 0.8
 1.5
 0.6
 1.4
 0.6


49 uxt ubiquitously-expressed, prefoldin-like chaperone 447933 4.3 2.3
 -0.3
 -1.2
 0.4
0.1
 1.7


50 trmt5 tRNA methyltransferase 5 564078 4.3 2.3
 3.0
 2.0
 5.2
 2.3
 3.0
 1.2
 0.5
 1.1
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