Orthologous genes in OrthoFinder**

Species Gene Description
 dre-u.3   lrit1b   leucine-rich repeat, immunoglobulin-like and transmembrane domains 1b 
 dre-r.3   lrit1b   leucine-rich repeat, immunoglobulin-like and transmembrane domains 1b 
 dre-u.3   lrit1a   leucine-rich repeat, immunoglobulin-like and transmembrane domains 1a 
 mmu-u.4   Lrit1   leucine-rich repeat, immunoglobulin-like and transmembrane domains 1 
 gga-u.3   LRIT1   leucine rich repeat, Ig-like and transmembrane domains 1 
 mcc-u.3   LRIT1   leucine rich repeat, Ig-like and transmembrane domains 1 

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Top 50 coexpressed genes to lrit1b (dre-u.3 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 dre4744   Phototransduction  10 44 7.13
 dre230   Purine metabolism  5 156 4.40
 dre4371   Apelin signaling pathway  5 178 4.13
 dre830   Retinol metabolism  1 93 -
 dre190   Oxidative phosphorylation  1 148 -

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dre:lrit1b (leucine-rich repeat, immunoglobulin-like and transmembrane domains 1b) External Links;


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Show Coexpressed Genes
UMAP
Gene Function KEGG Entrez
Gene
ID		 Other ID LINK Target Reference

dre-u.3
for
lrit1b
dre-r.3
for
lrit1b
dre-u.3
for
lrit1a
mmu-u.4
for
Lrit1
gga-u.3
for
LRIT1
mcc-u.3
for
LRIT1
1 pde6hb phosphodiesterase 6H, cGMP-specific, cone, gamma, paralog b 393810 7.6 4.0
 4.7
4.1
 4.2
 1.9
 4.2
0.3
2 arr3a arrestin 3a, retinal (X-arrestin) 436678 7.4 3.9
 4.7
3.9
 -0.2
-0.9
 2.6
0.8
 0.7
-0.7
3 pdcb phosducin b 386614 6.8 3.6
 5.6
3.2
 5.8
-0.7
 1.7
0.1
 1.2
0.4
4 grk7a G protein-coupled receptor kinase 7a 566120 6.7 3.5
 4.4
1.4
-1.0
5 si:ch1073-303d10.1 si:ch1073-303d10.1 558565 6.1 3.2



6 rbp3 retinol binding protein 3 30735 6.1 3.2
 4.4
 3.3
 2.3
 2.7
7 rbp4l retinol binding protein 4, like 335651 5.9 3.1
 4.6
0.2
8 saga S-antigen; retina and pineal gland (arrestin) a 792319 5.7 3.0



9 LOC108191765 cadherin-related family member 1-like 108191765 5.6 3.0
 4.8
3.3
 2.2
 3.5
 1.7
10 gnat1 guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1 140428 5.6 2.9
 3.2
3.2
 4.3
1.1
 2.8
2.1
 2.0
0.6
11 lrit3a info leucine-rich repeat, immunoglobulin-like and transmembrane domains 3a 558559 5.6 2.9
 3.7
1.7
12 lactbl1a lactamase, beta-like 1a 568717 5.5 2.9
 4.9
3.9
2.7
13 rcvrn3 recoverin 3 572207 5.5 2.9
 4.2
3.6
 1.8
 1.5
 0.1
14 rcvrna recoverin a 570333 5.5 2.9
 4.2
3.6
 1.8
 1.5
 0.1
15 gnb5b guanine nucleotide binding protein (G protein), beta 5b 393719 5.4 2.8
 3.2
2.1
 0.7
 0.9
-0.2
 -0.2
-0.5
16 pde6c phosphodiesterase 6C, cGMP-specific, cone, alpha prime 393845 5.4 2.8
 4.4
0.8
17 glmnb glomulin, FKBP associated protein b 100170791 5.4 2.8
 3.1
0.5
 0.9
 0.9
 -0.3
18 arl3l1 ADP ribosylation factor like GTPase 3, like 1 393666 5.3 2.8
 2.7
1.8
 -0.5
-1.1
 1.7
-0.2
 0.3
-0.5
19 rs1a retinoschisin 1a 445044 5.3 2.8
 3.6
2.5
 3.9
 2.5
20 gnb3b guanine nucleotide binding protein (G protein), beta polypeptide 3b 406483 5.1 2.7
 3.2
2.1
 0.7
 0.9
-0.2
 -0.2
-0.5
21 pcare2 photoreceptor cilium actin regulator 2 100538059 5.1 2.7



22 pde6ha phosphodiesterase 6H, cGMP-specific, cone, gamma, paralog a 393758 5.1 2.7
 4.7
4.1
 4.2
 1.9
 4.2
0.3
23 gucy2d guanylate cyclase 2D, retinal 140426 5.1 2.7
 3.3
2.1
1.9
 2.1
24 lrfn2b leucine rich repeat and fibronectin type III domain containing 2b 558484 5.0 2.7
 1.9
1.5
 0.9
0.5
 2.5
-0.9
 3.4
0.8
25 abca4b ATP-binding cassette, sub-family A (ABC1), member 4b 555506 5.0 2.7
 3.0
1.8
 -0.1
-0.6
 3.4
1.6
 1.1
-0.2
26 slc25a3a solute carrier family 25 member 3a 393688 5.0 2.7
 3.7
-0.9
 -1.0
 0.7
 -1.3
27 gnat2 guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2 140429 5.0 2.6
 3.2
3.2
 4.3
1.1
 2.8
2.1
 2.0
0.6
28 si:ch1073-83n3.2 si:ch1073-83n3.2 100000241 5.0 2.6



29 lrit1a leucine-rich repeat, immunoglobulin-like and transmembrane domains 1a 553943 4.9 2.6
 4.9


30 usp21 ubiquitin specific peptidase 21 563546 4.9 2.6
 3.2
1.1
 0.1
 1.1
-0.1
 0.2
-0.4
31 LOC110437775 retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma-like 110437775 4.9 2.6
 4.7
4.1
 4.2
 1.9
 4.2
0.3
32 rcvrn2 recoverin 2 335650 4.9 2.6
 4.2
3.6
 1.8
 1.5
 0.1
33 fstl5 follistatin-like 5 566192 4.9 2.6
 2.7
 0.8
 0.9
 0.2
34 rs1b retinoschisin 1b 447917 4.8 2.5
 3.6
2.5
 3.9
 2.5
35 gngt1 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 335656 4.8 2.5
 2.7
2.2
 9.5
0.2
 1.4
1.0
 2.2
1.0
36 scamp5b secretory carrier membrane protein 5b 100004357 4.8 2.5
 4.3
-0.3
 -0.2
-0.9
 -0.6
-0.8
 1.1
-0.5
37 si:dkeyp-9d4.3 si:dkeyp-9d4.3 100148061 4.8 2.5
 2.9
0.4
 -0.6
-2.8
 2.2
1.7
 0.6
0.4
38 guk1b guanylate kinase 1b 393697 4.8 2.5
 2.6
-0.9
 0.1
 0.7
 -1.0
39 opn1lw2 opsin 1 (cone pigments), long-wave-sensitive, 2 436716 4.8 2.5
 2.9
2.7
2.2
40 rlbp1a retinaldehyde binding protein 1a 393678 4.7 2.5
 2.6
1.9
 1.7
 0.2
 1.1
41 ppa1a inorganic pyrophosphatase 1a 393706 4.7 2.5
 3.0
-0.7
 0.9
-0.2
 -1.4
 -0.2
-0.8
42 si:dkey-206f10.1 si:dkey-206f10.1 560719 4.7 2.5



43 abca4a ATP-binding cassette, sub-family A (ABC1), member 4a 798993 4.6 2.4



44 si:ch73-256g18.2 si:ch73-256g18.2 557975 4.6 2.4



45 rdh8b retinol dehydrogenase 8b 393761 4.5 2.4
 2.9
1.0
2.3
1.2
 1.0
46 LOC100334711 cyclic nucleotide-gated channel rod photoreceptor subunit alpha-like 100334711 4.4 2.3
 4.6
3.3
 2.6
1.4
 1.3
1.3
 0.8
47 rho rhodopsin 30295 4.4 2.3
 3.4
2.3
 1.8
 1.7
0.9
 2.7
48 gngt2b guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2b 797361 4.4 2.3
 2.7
2.2
 9.5
0.2
 1.4
1.0
 2.2
1.0
49 grm6b glutamate receptor, metabotropic 6b 565450 4.4 2.3
 2.8
1.6
 1.5
0.7
 2.3
1.6
 0.7
0.2
50 syt5a synaptotagmin Va 436686 4.4 2.3
 4.1
3.2
 4.0
1.9
 1.2
0.6
 1.7
1.4
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