Orthologous genes in OrthoFinder**

Species Gene Description
 dre-u.3   rbm39a   RNA binding motif protein 39a 
 dre-r.3   rbm39a   RNA binding motif protein 39a 
 dre-m.5   rbm39a   RNA binding motif protein 39a 
 dre-u.3   rbm39b   RNA binding motif protein 39b 
 hsa-u.4   RBM23   RNA binding motif protein 23 
 hsa-u.4   RBM39   RNA binding motif protein 39 
 mmu-u.4   Rbm39   RNA binding motif protein 39 
 rno-u.3   Rbm39   RNA binding motif protein 39 
 gga-u.3   RBM23   RNA binding motif protein 23 
 mcc-u.3   RBM23   RNA binding motif protein 23 
 mcc-u.3   RBM39   RNA binding motif protein 39 
 cfa-u.3   RBM23   RNA binding motif protein 23 
 cfa-u.3   RBM39   RNA binding motif protein 39 
 dme-u.3   Caper   caper 
 cel-u.3   rbm-39   RNA Binding Motif protein homolog 

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Top 50 coexpressed genes to rbm39a (dre-u.3 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 dre3015   mRNA surveillance pathway  4 94 4.08
 dre3013   Nucleocytoplasmic transport  3 108 2.62
 dre3040   Spliceosome  3 139 2.32
 dre514   Other types of O-glycan biosynthesis  2 53 2.12
 dre5168   Herpes simplex virus 1 infection  2 204 -

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dre:rbm39a (RNA binding motif protein 39a) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
UMAP
Gene Function KEGG Entrez
Gene
ID		 Other ID LINK Target Reference

dre-u.3
for
rbm39a
dre-r.3
for
rbm39a
dre-m.5
for
rbm39a
dre-u.3
for
rbm39b
hsa-u.4
for
RBM23
hsa-u.4
for
RBM39
mmu-u.4
for
Rbm39
rno-u.3
for
Rbm39
gga-u.3
for
RBM23
mcc-u.3
for
RBM23
mcc-u.3
for
RBM39
cfa-u.3
for
RBM23
cfa-u.3
for
RBM39
dme-u.3
for
Caper
cel-u.3
for
rbm-39
1 srsf11 serine and arginine rich splicing factor 11 321886 11.6 6.8
 3.7
 6.3
 -1.5
 7.5
 14.0
 12.0
 7.6
 -0.2
 4.8
 -0.3
 9.3

2 clk4b CDC-like kinase 4b 503607 11.0 5.7
4.0
3.6
 1.8
1.6
 8.3
5.9
 8.7
6.9
 11.1
10.7
 5.9
4.5
 2.2
2.0
 9.1
7.9
 2.0
1.3
 8.6
7.6
 2.7
 1.7
3 luc7l LUC7-like (S. cerevisiae) 415206 9.7 5.3
 3.5
 5.0
0.2
 1.2
 6.1
 8.3
4.7
 8.9
6.4
 6.0
2.1
 2.3
1.2
 7.0
4.5
 0.9
0.1
 6.3
4.3
 4.0
 0.8
4 si:ch211-114c12.2 si:ch211-114c12.2 336578 9.6 6.2
 2.5











5 LOC565999 protein SON 565999 9.2 4.8
4.3
 0.1
 5.8
 4.8
 5.6
 1.4
 1.7
 4.2
 -0.1
 2.0
 0.8
 1.5
6 sltm SAFB-like, transcription modulator 406642 9.2 6.1
 2.3
 4.6
 0.7
 5.9
 6.4
2.6
 1.0
 2.9
 -0.1
 5.1
3.1
7 trnau1apb tRNA selenocysteine 1 associated protein 1b 791478 9.2 5.4
 3.0
 6.7
0.1
 -1.1
 -0.2
 0.2
 0.5
 3.8
-0.4
 -0.2
 -0.0
 -0.0
 -2.1
 3.2
 2.1
8 zgc:112982 zgc:112982 503771 8.6 4.3
 3.5
 4.4
 -0.8
 1.8
 3.1
 2.4
 2.6
 -0.7
 -1.0
 -1.2
 2.5

9 rbm5 RNA binding motif protein 5 324302 8.6 5.1
 2.8
 5.0
1.5
 3.6
2.5
 5.8
2.4
 6.5
1.6
 10.7
2.8
 4.6
-0.6
 3.5
2.9
 7.9
2.9
 2.4
1.8
 6.0
2.2
 7.8
4.9
 1.4
10 arglu1b arginine and glutamate rich 1b 393131 8.6 5.1
 2.7











11 nktr natural killer cell triggering receptor 323005 8.4 5.5
 2.1
 2.9
1.9
 0.8
0.3
 5.7
5.1
 5.0
-0.1
 3.9
1.5
 1.5
0.9
 0.8
0.5
 4.0
3.6
 -0.0
-0.3
 3.1
-0.7
 8.1
-0.1
 2.2
1.1
12 zc3h11a zinc finger CCCH-type containing 11A 324551 8.3 4.8
 2.8
 2.3
 1.3
 4.5
 5.1
 4.2
 5.1
 1.5
 7.2
 -0.1
 5.8

13 pcf11 PCF11 cleavage and polyadenylation factor subunit 492341 8.2 4.7
 2.8
 2.3
 0.9
 6.0
 5.0
 6.7
 7.0
 1.0
 4.8
 1.4
 6.5
 5.7
 3.8
14 rbm39b RNA binding motif protein 39b 541556 8.2 3.5
 4.0
 8.2
 2.5
 2.5


3.2
 3.2
 1.3
 1.3

15 ogt.2 O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 2 652952 8.0 4.6
 2.7
 5.7
5.0
 -0.3
 4.8
 5.3
 5.5
 3.8
 0.3
 5.9
 0.7
 5.7
 3.5
 -0.5
16 clk4a CDC-like kinase 4a 321857 7.9 4.2
 3.0
 4.0
3.6
 1.8
1.6
 8.3
5.9
 8.7
6.9
 11.1
10.7
 5.9
4.5
 2.2
2.0
 9.1
7.9
 2.0
1.3
 8.6
7.6
 2.7
 1.7
17 sfswap splicing factor SWAP 394143 7.8 5.1
 2.0
 5.2
 1.0
 5.9
 6.2
 5.2
 4.8
 1.2
 3.9
 1.2
 4.1
 4.6
 0.7
18 clk2a CDC-like kinase 2a 558981 7.6 4.4
 2.6
 4.0
3.6
 1.8
1.6
 8.3
5.9
 8.7
6.9
 11.1
10.7
 5.9
4.5
 2.2
2.0
 9.1
7.9
 2.0
1.3
 8.6
7.6
 2.7
 1.7
19 pnisr PNN-interacting serine/arginine-rich protein 563938 7.6 4.1
 2.8
 3.8
 0.6
 8.7
 4.8
 10.8
 4.3
 0.1
 4.6
 0.1
 4.2

20 u2surp U2 snRNP-associated SURP domain containing 567461 7.5 5.5
 1.3
 4.2
2.3
 -1.3
 3.7
 6.0
 6.2
 2.6
 0.6
 4.5
 -1.3
 5.7
 3.2
 0.1
21 ercc6 excision repair cross-complementation group 6 560477 7.4 3.9
3.8
 1.5
 2.4
 2.9
 4.4
 1.1
 1.0
 1.6
 1.7
 2.3
0.9
-0.8
22 si:ch211-13c6.2 si:ch211-13c6.2 100000125 7.3 3.8












23 uspl1 ubiquitin specific peptidase like 1 445403 7.2 4.0
 2.6
 1.7
 0.8
 2.9
 1.1
 2.2
 3.7
 0.3
 3.1
 1.8
 4.2

24 srsf6b serine and arginine rich splicing factor 6b 494133 7.2 4.6
 1.9
 4.7
3.3
 2.2
1.7
 9.8
6.0
 7.2
7.0
 10.2
8.0
 6.2
5.5
 2.9
2.8
 9.4
4.8
 2.5
1.7
 4.2
3.5
 6.7
2.3
 6.2
4.1
25 ccnl1b cyclin L1b 326088 7.1 4.4
 2.1
 4.7
1.8
 0.2
-0.5
 10.4
5.0
 6.9
5.7
 8.2
 6.0
5.6
 0.9
 5.4
 0.7
 9.1
 5.3
 1.5
26 rps6kal ribosomal protein S6 kinase a, like 337670 7.0 3.6
 2.9
 2.6
1.6
 1.8
0.8
 0.6
0.4
 0.9
-0.3
 0.4
-0.3
 1.3
0.3
 1.8
1.6
 0.4
0.2
 0.9
-0.3
 -0.3
-0.8
 1.2
 0.0
27 srek1 splicing regulatory glutamine/lysine-rich protein 1 445219 7.0 3.7
4.0
 1.4
 10.2
 7.5
 7.5
 1.8
 0.6
 7.5
 -1.6
 6.1
 1.6
 3.7
28 paxbp1 PAX3 and PAX7 binding protein 1 563266 7.0 4.0
 2.4
 6.0
1.0
 -0.9
-2.2
 6.4
0.9
 7.0
 8.2
0.6
 4.8
3.9
 1.0
-1.9
 5.3
-0.4
 -0.5
 6.3
 5.6
 0.3
29 ogt.1 O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1 337685 6.8 4.6
 1.7
 5.7
5.0
 -0.3
 4.8
 5.3
 5.5
 3.8
 0.3
 5.9
 0.7
 5.7
 3.5
 -0.5
30 crebzf CREB/ATF bZIP transcription factor 562093 6.7 4.1
 2.1
 1.4
 -0.8
 3.6
 2.0
 6.6
 2.1
 0.2
 2.2
 -0.9
 4.3

31 kat5a K(lysine) acetyltransferase 5a 436638 6.7 3.9
 2.2
 3.1
1.3
 8.5
 2.3
 1.3
 3.5
 -0.2
 4.9
 -1.1
 4.9
 1.7
 2.0
 0.1
32 nxf1b nuclear RNA export factor 1b 323865 6.6 3.5
1.5
0.3
 2.4
-0.9
 4.7
-1.3
 6.0
-0.2
 6.2
0.4
 4.2
 2.5
 4.0
 2.1
 2.9
 4.6
0.1
 1.8
0.0
33 rsrp1 arginine/serine-rich protein 1 724003 6.6 3.6
 2.4











34 LOC567058 RNA-binding protein 6 567058 6.4 3.4












35 matr3l1.1 matrin 3-like 1.1 556124 6.4 3.3
 2.6











36 ncoa5 nuclear receptor coactivator 5 447849 6.4 3.7
 2.1
 4.7
 5.5
 2.7
 1.7
 2.1
 2.3
 5.5
 2.1
 4.4
 0.4
 1.7
37 arglu1a arginine and glutamate rich 1a 406834 6.3 3.7
 2.2











38 gigyf1b GRB10 interacting GYF protein 1b 100002679 6.3 3.3
2.8
2.3
 0.2
 2.7
 3.7
0.8
 3.5
1.0
 2.2
 1.7
0.1
 2.7
2.5
 2.6
-0.1
 2.1
1.6
 2.8
 5.0
1.8
39 wtap WT1 associated protein 334058 6.3 3.4
 2.4
 2.9
 2.7
 4.2
 2.7

2.9
 3.5
 2.4
 1.7
 7.9
40 scaf4b SR-related CTD-associated factor 4b 552961 6.3 3.3
7.9
3.4
 2.0
-0.9
 4.0
1.0
 3.4
0.1
 4.0
0.3
 2.6
2.2
 3.8
0.6
 2.8
2.0
 1.7
0.7
 2.8
1.0
 5.7
 4.2
41 safb scaffold attachment factor B 321979 6.3 3.5
 2.3
 5.1
 2.6
1.0
 4.1
4.1
 3.9
2.9
 5.1
4.7
 3.2
3.2
 2.5
1.9
 3.7
2.6
 2.0
-0.1
 3.8
3.0
 9.7
42 srrm1 serine/arginine repetitive matrix 1 406751 6.2 4.0
 1.8
 4.6
 0.5
 4.0
 3.7
 4.4
 4.6
 1.0
 4.6
 -0.3
 3.1
 4.0
 6.2
43 ddx39b DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B 393917 6.2 3.1
 2.6
 3.2
1.7
 2.1
 4.1
 3.3
0.2
 5.3
1.8
 1.1
 3.9
2.4
 5.1
0.9
 3.2
0.3
 3.1
0.5
 3.4
 4.9
44 si:ch211-216l23.2 si:ch211-216l23.2 565061 6.2 3.4
 2.2
 5.4










45 abcc5 ATP-binding cassette, sub-family C (CFTR/MRP), member 5 336147 6.2 3.2
3.5

0.8
1.7




0.1
46 ccnl1a cyclin L1a 553269 6.2 3.2
4.7
1.8
 0.2
-0.5
 10.4
5.0
 6.9
5.7
 8.2
 6.0
5.6
 0.9
 5.4
 0.7
 9.1
 5.3
 1.5
47 rnpc3 RNA-binding region (RNP1, RRM) containing 3 565672 6.1 4.5
 1.1
 3.7
 -0.6
 3.8
 4.3
 5.3
 2.8
 -0.3
 2.7
 -0.5
 4.1
 0.2
48 rsrc2 arginine/serine-rich coiled-coil 2 406566 6.1 4.1
 1.5
 4.5
 0.8
 12.1
 10.8
 10.8
 7.1
 3.8
 12.1
 1.0
 9.8
 3.5
 1.0
49 znf638 zinc finger protein 638 563749 6.0 4.4
 1.1
 4.0
 0.6
 3.4
 2.3
 2.6
 1.1
 0.2
 4.6
 2.1
 3.8

50 gpatch8 G patch domain containing 8 565404 6.0 4.7
 0.7
 1.4
 1.2
 3.7
 1.1
 2.8
 1.6
 0.7
 1.8
 1.3
 0.3

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