Orthologous genes in OrthoFinder**

Species Gene Description
 dre-u.3   rabgef1   RAB guanine nucleotide exchange factor (GEF) 1 
 dre-r.3   rabgef1   RAB guanine nucleotide exchange factor (GEF) 1 
 dre-m.5   rabgef1   RAB guanine nucleotide exchange factor (GEF) 1 
 dre-u.3   rabgef1l   RAB guanine nucleotide exchange factor (GEF) 1, like 
 mmu-u.4   Rabgef1   RAB guanine nucleotide exchange factor (GEF) 1 
 rno-u.3   Rabgef1   RAB guanine nucleotide exchange factor 1 
 gga-u.3   RABGEF1   RAB guanine nucleotide exchange factor 1 
 mcc-u.3   695887   rab5 GDP/GTP exchange factor 
 cfa-u.3   RABGEF1   RAB guanine nucleotide exchange factor 1 
 dme-u.3   Rabex-5   Rabaptin-5-associated exchange factor for Rab5 
 cel-u.3   rabx-5   RAB eXchange factor 
 sce-u.3   VPS9   guanine nucleotide exchange factor VPS9 
 spo-u.3   pre3   putative proteasome core particle subunit beta 1 Pre3 

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Top 50 coexpressed genes to rabgef1 (dre-u.3 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 dre4141   Protein processing in endoplasmic reticulum  4 198 2.85
 dre563   Glycosylphosphatidylinositol (GPI)-anchor biosynthesis  2 23 2.84
 dre564   Glycerophospholipid metabolism  2 112 -
 dre4120   Ubiquitin mediated proteolysis  2 161 -
 dre4144   Endocytosis  2 341 -

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dre:rabgef1 (RAB guanine nucleotide exchange factor (GEF) 1) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
UMAP
Gene Function KEGG Entrez
Gene
ID		 Other ID LINK Target Reference

dre-u.3
for
rabgef1
dre-r.3
for
rabgef1
dre-m.5
for
rabgef1
dre-u.3
for
rabgef1l
mmu-u.4
for
Rabgef1
rno-u.3
for
Rabgef1
gga-u.3
for
RABGEF1
mcc-u.3
for
695887
cfa-u.3
for
RABGEF1
dme-u.3
for
Rabex-5
cel-u.3
for
rabx-5
sce-u.3
for
VPS9
spo-u.3
for
pre3
1 mtx1a metaxin 1a 556917 6.5 3.4
1.3
1.0
 -0.9
-1.8
 0.5
-1.7
 3.3
 0.1
-0.1
 -0.2
-1.0
 1.0
 -0.8

2 amfra autocrine motility factor receptor a 406442 6.3 3.5
 2.4
 1.0
 1.3
 2.3
 -0.6
 2.5
 1.3
2.7

3 vps35 VPS35 retromer complex component 561697 5.9 3.1
-0.4
 0.8
 1.2
 2.0
 -0.5
 2.9
 1.2
 2.4
 0.5
 1.0
4 mief1 mitochondrial elongation factor 1 564985 5.6 2.9
1.8
1.6
 2.0
 -0.0
 0.9
 1.8
 2.0


0.9
5 yme1l1b YME1-like 1b 557907 5.5 2.9
1.5
0.1
 1.5
 0.4
 0.6
 3.3
 1.7
 0.5
 -0.4
 -1.4
 0.7
6 pla2g6 phospholipase A2, group VI (cytosolic, calcium-independent) 406370 5.3 2.1
 2.8
 -0.2
 0.4
 1.1
 1.1
 1.1
 -0.0
 2.7
 2.0
1.4
-0.4
-0.5
7 usp33 ubiquitin specific peptidase 33 406508 5.3 3.1
 1.8
 1.1
-0.2
 3.3
0.2
 0.3
-0.2
 1.9
0.8
 0.6
0.5
 3.4
-1.4
 3.9


8 vti1a vesicle transport through interaction with t-SNAREs 1A 567385 5.3 2.8
-0.7
 1.6
 1.1
 2.3
 1.4
 -1.1
 1.7
 0.9
 -1.3
 0.7
9 march6 membrane-associated ring finger (C3HC4) 6 100002072 5.3 3.0
 1.9
 1.2
 1.3
 1.1
 2.3
 2.9
 2.8
 1.3
 1.7
 -1.0
10 slc9a8 solute carrier family 9 member 8 494043 5.3 2.1
 2.8
 0.0
 -0.2
 1.4
 1.9
 2.4
 0.9
 2.2
 1.2

11 yipf4 Yip1 domain family, member 4 405827 5.0 2.0
 2.7
 0.5
 1.2
 0.4
 1.8
 -0.2
 2.8
-0.6

12 pex13 peroxisomal biogenesis factor 13 393618 4.9 2.6
1.1
 0.5
 2.0
 -0.0
 2.1
 1.9
 2.4
 -0.3
 0.8
 1.2
13 tmem9 transmembrane protein 9 334151 4.9 2.6
 1.9
 1.4
0.1
 1.6
0.1
 1.8
-1.3
 0.9
0.6
 0.4
-1.3
 0.2
-0.5
 1.3
 0.5

14 syvn1 synovial apoptosis inhibitor 1, synoviolin 335226 4.9 2.9
 1.6
 -0.1
 1.0
 -0.5
 -0.4
-0.9
 0.1
 0.2
 0.4
 0.5
 -1.1
 0.3
15 spryd7b SPRY domain containing 7b 393498 4.9 2.6
 1.9
 -0.1
-0.4
 1.7
 1.5
 0.9
 0.3
 2.7
 -0.8
 -0.9

16 clpxa caseinolytic mitochondrial matrix peptidase chaperone subunit Xa 447842 4.8 2.5
 1.9
 1.2
1.1
 2.2
 0.6
2.2
 2.1
 -0.1
 0.9
0.5
 3.1
 1.1
17 cog3 component of oligomeric golgi complex 3 553061 4.7 2.5
0.7
 0.6
 1.3
 3.3
 0.6
 3.2
 4.2
 1.3
 1.1
 2.6
18 rlim ring finger protein, LIM domain interacting 562487 4.7 2.7
 1.7
 0.7
 2.2
 2.2
 3.2
 2.3
 3.6



19 golm2 golgi membrane protein 2 555654 4.7 1.9
 2.4
 -0.9
 -0.2
 -0.6
 1.8
 -0.2
 0.5



20 LOC100334178 E3 ubiquitin-protein ligase RNF31 100334178 4.7 2.5
2.8
2.1
 1.5
 1.1
 0.1
 0.8
 0.1
 -0.8

-0.1
21 emc1 ER membrane protein complex subunit 1 565399 4.7 2.8
 1.5
 -1.6
 1.6
 0.7
 -0.4
 -0.0
 0.5
 -0.7
 1.4
 -2.2
 0.9
22 actr10 actin related protein 10 393139 4.6 2.2
 2.1
 0.6
 0.4
 2.2
 1.1
-0.5
 0.9
 -1.0
 2.9
 -0.6
1.9
23 cog7 component of oligomeric golgi complex 7 768247 4.5 2.6
 1.6
 1.3
 1.6
 0.2
 1.8
 -0.6
 -0.4
 3.8


24 tmbim4 transmembrane BAX inhibitor motif containing 4 406412 4.4 2.3
-1.1
 0.6
 -0.8
 -0.4
 0.2
 -0.6
 -0.6
 0.6
 -1.0
 0.0
25 slc25a28 solute carrier family 25 member 28 100535877 4.4 2.3
1.5
0.3
 0.9
0.8
 1.3
-0.6
 -0.6
-0.8
 2.6
1.7
 0.1
-0.7
 1.8
1.4
-1.2
 0.9
26 coq8b coenzyme Q8B 799071 4.4 2.3
0.2
-0.5
 2.4
0.4
 1.1
-1.0
 0.4
 -0.1
-0.9
 0.1
-1.1
 -1.0
 -0.4
 0.4
27 rab3gap2 RAB3 GTPase activating protein subunit 2 (non-catalytic) 368905 4.4 2.2
 1.9
 -0.8
 2.4
 1.0
 2.6
 0.8
 2.1
 2.1
 1.9

28 klhl15 kelch-like family member 15 445186 4.4 2.3
0.8
 0.8
 0.3
 1.2
 1.0
 1.5



29 pam peptidylglycine alpha-amidating monooxygenase 570822 4.4 2.3
-0.9
 -0.0
 -1.1
 0.1
 -0.8
 -0.0
 2.4
0.3
 1.9
0.0
-0.1
30 mfn2 mitofusin 2 567448 4.4 2.3
-0.2
-0.4
 2.2
1.3
 1.4
1.1
 1.9
1.8
 1.7
1.1
 3.4
0.2
 -0.0
-0.4
 -0.3
1.6
-0.1
31 tbc1d8b TBC1 domain family member 8B 566657 4.4 2.3
2.3
1.2
 3.0
1.2
 0.9
0.2
 1.5
1.5
 1.6
1.3
 0.8
0.3
 0.8
 2.7
 0.8
32 slc35b1 solute carrier family 35 member B1 447844 4.4 2.3
-1.4
 -0.6
 -1.1
 -0.7
 -0.2
 0.2
 0.1
 -0.4
 1.7
33 si:ch1073-224n8.1 si:ch1073-224n8.1 327438 4.4 2.3










34 fkbp8 FKBP prolyl isomerase 8 393858 4.3 2.3
1.0
-1.2
 0.2
 -0.4
 -0.4
 0.7
 -0.6
 1.0


35 pigq phosphatidylinositol glycan anchor biosynthesis, class Q 321218 4.3 2.6
 1.5
 -0.2
 0.7
 1.2
 0.1
 -0.0
 -0.7
 -1.2
 0.8
 -0.3
 2.5
36 vps45 vacuolar protein sorting 45 homolog 561653 4.3 2.4
 1.6
 2.2
 0.8
 2.1
 0.8
 1.0
 0.1
 3.2
 -0.9
 1.0
 0.3
37 dtx2 deltex 2, E3 ubiquitin ligase 568626 4.3 2.1
 1.9
 1.6
1.4
 1.6
0.3
 1.4
0.7
 1.3
0.8
 -0.2
-0.5
 2.6
-0.0
 0.8

1.6
38 emc7b ER membrane protein complex subunit 7b 561549 4.3 3.0
 0.9
 -0.8
 1.1
 1.0
 0.7
 1.0
 1.9
 0.5
 0.4
-0.6
39 rnft1 ring finger protein, transmembrane 1 406509 4.2 1.6
 2.3
 1.7
-0.4
 0.3
-0.7
 2.0
1.0
 1.7
-0.6
 0.4
 1.7
-2.0
 6.0


40 tecpr1a tectonin beta-propeller repeat containing 1a 556500 4.2 2.2
2.1
1.2
 -0.4
 -1.1
 1.0
 -0.9
 0.1
 2.1
 -0.1
 -0.9
 -0.5
41 ube2g2 ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast) 550464 4.2 1.6
 2.4
 0.4
 1.8
 3.9
 1.9
 -0.2
 0.2
 -1.5
 -1.3
 -0.5
 0.7
42 smg8 SMG8 nonsense mediated mRNA decay factor 567424 4.2 2.0
 1.9
 0.4
 2.4
 3.1
 0.4
 1.1
 0.5
 5.0
 -0.1

43 gga1 golgi-associated, gamma adaptin ear containing, ARF binding protein 1 798361 4.2 2.0
 2.0
 1.9
0.8
 1.2
-0.1
 1.1
0.3
 1.2
0.4
 1.5
1.2
 2.6
1.1
 -0.1
 -0.5
 -0.5
44 samm50l sorting and assembly machinery component 50 homolog, like 492471 4.2 2.2
-0.7
-1.3
 0.4
 1.5
 -0.7
 -2.5
 -0.4
 0.2
 -1.4
 1.0
 -0.2
45 exoc3 exocyst complex component 3 334015 4.2 2.5
 1.3
 0.4
-0.6
 1.8
-0.7
 2.7
0.2
 4.3
0.6
 1.0
0.9
 0.2
-0.1
 6.0
 0.8
 1.1
 0.1
46 fbxo3 F-box protein 3 553731 4.1 2.2
-0.7
 1.7
 0.5
 0.8
 1.3
 1.8



47 pigo phosphatidylinositol glycan anchor biosynthesis, class O 563993 4.1 2.2
-1.1
 0.4
 0.2
 0.5
 1.0
 -1.6
 1.4
 1.3
 -0.8
 -0.6
48 ankrd54 ankyrin repeat domain 54 436851 4.1 2.4
 1.5
 -0.5
 -0.0
 -0.0
 -0.1
 -0.3
 -0.6



49 hmgcl 3-hydroxy-3-methylglutaryl-CoA lyase 394190 4.1 2.8
 1.0
 0.0
 1.0
-0.6
 0.7
0.0
 0.6
-0.8
 0.8
-1.5
 -1.1
 0.0
 -0.6

50 lclat1 lysocardiolipin acyltransferase 1 406554 4.1 2.2
0.6
 0.4
 -0.1
 -0.6
 0.7
 1.5
1.5
1.1
 0.3
-0.5
 1.0
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