Orthologous genes in OrthoFinder**

Species Gene Description
 dre-u.3   rab1ab   RAB1A, member RAS oncogene family b 
 dre-r.3   rab1ab   RAB1A, member RAS oncogene family b 
 dre-m.5   rab1ab   RAB1A, member RAS oncogene family b 
 dre-u.3   rab1aa   RAB1A, member RAS oncogene family a 
 dre-u.3   rab1bb   RAB1B, member RAS oncogene family b 
 hsa-u.4   RAB1A   RAB1A, member RAS oncogene family 
 hsa-u.4   RAB1B   RAB1B, member RAS oncogene family 
 mmu-u.4   Rab1b   RAB1B, member RAS oncogene family 
 mmu-u.4   Rab1a   RAB1A, member RAS oncogene family 
 rno-u.3   Rab1b   RAB1B, member RAS oncogene family 
 rno-u.3   Rab1a   RAB1A, member RAS oncogene family 
 gga-u.3   RAB1B   RAB1B, member RAS oncogene family 
 mcc-u.3   RAB1B   RAB1B, member RAS oncogene family 
 mcc-u.3   RAB1A   RAB1A, member RAS oncogene family 
 cfa-u.3   RAB1A   RAB1A, member RAS oncogene family 
 cfa-u.3   RAB1B   RAB1B, member RAS oncogene family 
 dme-u.3   Rab1   Rab1 
 cel-u.3   rab-1   RAB family 
 sce-u.3   YPT1   Rab family GTPase YPT1 

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Top 50 coexpressed genes to rab1ab (dre-u.3 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 dre5132   Salmonella infection  10 306 6.13
 dre4144   Endocytosis  9 324 5.94
 dre4810   Regulation of actin cytoskeleton  7 268 5.41
 dre4530   Tight junction  6 230 4.69
 dre4145   Phagosome  5 162 4.32

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dre:rab1ab (RAB1A, member RAS oncogene family b) External Links;


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Show Coexpressed Genes
UMAP
Gene Function KEGG Entrez
Gene
ID		 Other ID LINK Target Reference

dre-u.3
for
rab1ab
dre-r.3
for
rab1ab
dre-m.5
for
rab1ab
dre-u.3
for
rab1aa
dre-u.3
for
rab1bb
hsa-u.4
for
RAB1A
hsa-u.4
for
RAB1B
mmu-u.4
for
Rab1b
mmu-u.4
for
Rab1a
rno-u.3
for
Rab1b
rno-u.3
for
Rab1a
gga-u.3
for
RAB1B
mcc-u.3
for
RAB1B
mcc-u.3
for
RAB1A
cfa-u.3
for
RAB1A
cfa-u.3
for
RAB1B
dme-u.3
for
Rab1
cel-u.3
for
rab-1
sce-u.3
for
YPT1
1 csnk2b casein kinase 2, beta polypeptide 30428 7.9 4.1
0.8
 1.1
 0.3
 4.6
 3.3
 1.1
 2.5
 -0.1
 2.4
 3.3
 -0.0
 -1.0
 2.2
 1.1
-0.6
 3.4
 3.3
1.0
2 rab2a RAB2A, member RAS oncogene family 140617 7.8 4.9
 2.2
 0.5
 1.6
 9.4
0.4
 2.1
0.4
 -1.0
 0.8
 1.6
0.3
 5.6
1.0
 7.1
 2.7
0.2
 4.4
-1.2
 4.4
-0.3
 2.2
1.9
 7.3
 8.9
3 ube2v2 ubiquitin-conjugating enzyme E2 variant 2 406836 7.6 4.8
 2.1
 0.7
-0.3
 1.0
-0.2
 4.5
 0.8
 7.0
-0.9
 4.1
2.3
 5.1
0.3
 3.7
0.7
 2.8
2.1
 3.8
0.3
 2.0
1.0
 1.2
 2.5
 3.5
 3.8
 1.4
4 arf6b ADP-ribosylation factor 6b 100003206 6.6 3.4
1.2
0.4
 1.2
0.2
 1.6
 1.1
 0.1
 3.6
 0.3
 2.3
 2.0
 2.6
 2.5
 2.9
 1.2
 3.0
 3.1
5 arf2a ADP-ribosylation factor 2a 399477 6.5 4.4
 1.6
 3.4
2.7
 1.7
1.6
 8.2
2.1
 6.3
4.8
 4.5
3.9
 10.5
8.1
 6.2
2.2
 8.1
5.3
 9.9
7.9
 7.4
5.8
 6.7
3.5
 3.3
2.2
 2.0
1.8
 5.0
2.9
 10.0
6.4
 3.7
3.5
6 tmed10 transmembrane p24 trafficking protein 10 326716 6.4 4.0
 1.8
 0.3
 -0.1
 3.1
 1.6
 1.0
 4.7
 2.8
 3.7
 3.2
 1.4
 3.5
 -0.1
 1.5
 2.8
 6.4
 2.7
7 psmd11b proteasome 26S subunit, non-ATPase 11b 322265 6.4 3.3
 2.6
 2.8
1.8
 1.0
0.6
 2.7
 2.4
 0.9
 2.2
 2.3
 2.6
 3.0
 3.4
 2.9
 -0.2
 1.4
 2.0
 5.9
 1.9
8 rhoaa ras homolog gene family, member Aa 406411 6.1 3.8
 1.8
 1.7
1.3
 1.8
1.3
 2.2
1.5
 4.4
2.6
 3.0
1.5
 4.8
1.1
 3.0
2.5
 2.9
1.4
 4.2
1.3
 4.1
3.5
 4.2
1.9
 1.4
0.0
 3.4
2.5
 5.3
 6.5
 2.8
9 gdi2 GDP dissociation inhibitor 2 323765 6.1 4.3
 1.3
 1.0
0.6
 1.3
-0.2
 1.3
1.2
 4.6
0.5
 2.5
1.2
 5.5
1.6
 2.8
2.1
 5.4
2.5
 4.0
 2.2
1.6
 2.5
1.0
 3.1
0.8
 4.3
2.5
 2.9
 7.4
 1.0
10 arf2b ADP-ribosylation factor 2b 327026 6.0 3.5
 2.0
 3.4
2.7
 1.7
1.6
 8.2
2.1
 6.3
4.8
 4.5
3.9
 10.5
8.1
 6.2
2.2
 8.1
5.3
 9.9
7.9
 7.4
5.8
 6.7
3.5
 3.3
2.2
 2.0
1.8
 5.0
2.9
 10.0
6.4
 3.7
3.5
11 capza1b capping actin protein of muscle Z-line subunit alpha 1b 474327 5.8 3.9
 1.5
 0.4
-0.5
 3.7
1.0
 4.6
1.1
 2.9
1.6
 2.5
2.4
 4.6
4.0
 3.3
0.8
 5.7
5.2
 3.7
0.8
 2.7
0.1
 3.8
2.8
 1.9
1.0
 1.7
0.9
 4.6
 5.1
 1.5
12 arhgdia Rho GDP dissociation inhibitor (GDI) alpha 406770 5.8 4.0
 1.3
 2.3
-0.5
 0.6
-0.0
 2.7
0.2
 7.1
3.0
 8.4
1.8
 3.4
-0.2
 6.6
1.6
 3.0
0.5
 2.4
0.0
 8.3
0.2
 2.8
-0.4
 3.7
-0.6
 9.0
3.0
 5.3
 4.0
 0.7
13 arl1 ADP-ribosylation factor-like 1 436746 5.8 3.0
0.1
 1.6
 5.4
 0.8
 1.6
 6.7
 1.5
 8.5
 4.0
 0.9
 3.3
 3.1
 0.2
 1.2
 2.9
 -0.3
14 oaz1b ornithine decarboxylase antizyme 1b 259193 5.8 3.1
 2.2
 2.4
1.0
 1.1
0.3
 2.2
0.5
 4.0
3.1
 3.6
2.0
 1.5
0.2
 4.6
3.4
 1.0
0.9
 4.3
1.1
 3.2
2.9
 0.9
0.6
 0.5
0.1
 2.8
2.8
 2.4

15 cdv3 carnitine deficiency-associated gene expressed in ventricle 3 334102 5.8 2.9
 2.4
 1.0
 -0.1
 3.1
 -0.1
 -1.3
 1.6
 -0.7
-1.0
 2.1
-0.6
 3.5
 0.8
 2.6
 3.5
 -1.2


16 tm9sf2 transmembrane 9 superfamily member 2 334370 5.7 3.1
 2.1
 3.0
0.7
 0.3
-0.1
 3.7
0.8
 3.1
2.5
 2.5
0.9
 4.6
1.4
 2.4
1.9
 7.3
2.1
 4.2
2.4
 3.3
0.8
 3.1
1.1
 -0.5
-0.5
 3.1
1.3
 2.6
1.9
 3.1
1.1
 0.3
-1.1
17 h3f3b.1 H3 histone, family 3B.1 550262 5.7 3.0
0.8
0.3
 1.3
1.3
 4.2
-0.1
 0.9
0.8
 0.6
0.3
 3.8
2.2
 0.4
0.4
 3.7
0.5
 2.6
1.3
 1.3
1.0
 3.4
0.2
 0.8
0.5
 0.3
-0.1
 2.3
1.7
 1.6
0.7
 0.7
0.5
18 calm3b calmodulin 3b (phosphorylase kinase, delta) 321808 5.6 3.7
 1.5
 1.6
0.5
 2.6
2.5
 4.9
2.8
 6.2
1.8
 4.3
2.9
 4.4
3.7
 3.1
1.7
 3.2
3.0
 4.9
1.3
 3.3
0.2
 2.7
1.9
 4.5
2.2
 2.2
2.0
 1.8
 4.8
19 clint1a clathrin interactor 1a 323870 5.4 3.2
 1.8
 3.2
1.4
 0.9
-0.6
 2.5
 0.9
 -0.6
 5.5
 -0.1
 2.7
 6.2
 0.8
 3.5
 4.4
 1.1
 0.5
 2.8
 1.3
20 ubqln4 ubiquilin 4 334337 5.4 3.0
 1.9
 1.2
 0.8
 2.1
1.4
 2.0
1.3
 1.5
0.7
 3.2
2.0
 1.7
0.9
 2.7
2.2
 2.5
1.9
 0.8
0.5
 4.3
1.7
 2.2
0.8
 1.9
1.1
 2.2
 4.5
 1.8
21 tmed9 transmembrane p24 trafficking protein 9 613145 5.3 3.3
 1.6
 3.1
-0.3
 3.8
1.3
 4.2
-0.1
 1.9
1.6
 0.6
-0.1
 3.8
1.5
 2.5
1.6
 3.8
1.9
 2.4
-0.6
 2.1
0.5
 0.5
 -0.1
-0.3
 3.6
2.4
 1.9
 3.9
-1.0
 1.8
0.8
22 atp6v0ca ATPase H+ transporting V0 subunit ca 192336 5.3 3.5
 1.4
 1.5
-0.3
 3.1
0.6
 3.1
 5.5
 2.9
 3.3
 2.2
 3.7
 2.2
 3.2
 2.4
 3.4
 4.2
 3.0
 4.7
3.1
 1.3
1.0
23 arf5 ADP-ribosylation factor 5 378724 5.3 3.1
 1.8
 3.4
2.7
 1.7
1.6
 8.2
2.1
 6.3
4.8
 4.5
3.9
 10.5
8.1
 6.2
2.2
 8.1
5.3
 9.9
7.9
 7.4
5.8
 6.7
3.5
 3.3
2.2
 2.0
1.8
 5.0
2.9
 10.0
6.4
 3.7
3.5
24 cfl1 cofilin 1 321496 5.2 2.7
1.4
0.6
 1.0
1.0
 4.4
2.2
 11.6
1.7
 8.3
0.9
 5.3
2.8
 4.6
0.6
 4.1
2.7
 3.1
0.6
 6.1
2.1
 5.3
2.4
 2.0
0.3
 9.0
1.2
 1.9
0.2
 13.3
6.9
 4.1
25 lasp1 LIM and SH3 protein 1 323216 5.2 3.6
 1.1
 -0.6
-1.6
 0.5
-0.1
 2.4
 4.6
 2.6
 4.1
 3.4
 3.1
 2.1
 2.2
 3.5
 0.0
 2.0
1.0
 1.4
26 ywhaba tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide a 323055 5.1 3.4
 1.3
 1.1
1.0
 3.1
2.0
 5.2
3.3
 4.3
3.4
 3.2
2.6
 7.2
4.5
 3.8
1.4
 3.9
3.5
 4.7
3.6
 4.2
2.4
 5.7
4.4
 2.1
2.0
 3.1
1.7
 4.5
1.8
 4.6
3.1
 3.4
2.5
27 rab5c RAB5C, member RAS oncogene family 386807 5.1 3.0
 1.7
 2.1
1.5
 2.2
1.5
 6.6
3.1
 7.0
4.7
 4.2
2.4
 8.3
3.0
 7.2
5.7
 4.0
3.8
 5.8
4.4
 5.5
4.8
 3.1
2.5
 4.8
3.8
 4.4
2.7
 7.2
 11.9
 2.3
1.3
28 arpc3 actin related protein 2/3 complex, subunit 3 415204 5.1 3.3
 1.4
 0.2
 1.4
 3.7
 3.3
 1.0
 2.7
 3.7
 3.6
 2.8
 2.1
 4.0
 2.6
 3.2
 3.1
0.5
 3.5
 2.8
29 kctd5a potassium channel tetramerization domain containing 5a 322008 5.1 2.7
1.1
0.8
 2.4
-0.2
 1.5
-0.5
 2.9
0.5
 1.9
1.3
 1.4
-0.5
 1.9
-0.2
 3.1
0.1
 2.7
1.0
 1.5
0.8
 2.2
-1.0
 2.7
1.3
 3.9
2.2
 2.4
 3.6
30 myl12.1 myosin, light chain 12, genome duplicate 1 326719 5.0 3.3
 1.3
 -0.2
-0.4
 2.3
1.2
 2.2
1.3
 3.1
1.4
 2.2
2.1
 1.4
1.2
 3.3
2.6
 2.3
1.1
 2.7
2.6
 1.7
1.6
 1.0
0.6
 1.3
1.1
 1.8
1.5
 5.0
0.3
 3.7
0.8
31 dad1 defender against cell death 1 566527 5.0 3.4
 1.2
 0.2
 1.1
 3.6
 1.9
 2.3
 0.9
 5.1
 0.9
 3.7
 0.1
 0.3
 1.1
 1.6
 2.1
 0.7
 0.1
32 usp4 ubiquitin specific peptidase 4 (proto-oncogene) 449927 5.0 2.6
2.0
1.7
 0.6
-0.4
 1.1
-0.1
 0.9
0.7
 2.5
-0.6
 0.4
-1.6
 2.3
0.9
 1.0
-0.1
 1.2
-0.7
 2.3
1.6
 0.9
-1.0
 3.0
-0.8
 2.0
1.3
1.1
 -1.8
33 ufm1 ubiquitin-fold modifier 1 322756 5.0 3.6
 1.0
 -0.8
 1.3
 4.8
 -0.6
 0.9
 6.3
 0.8
 6.7
 6.5
 -2.0
 2.0
 1.2
 0.3
 2.2
 1.2
34 ywhabl tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide like 321729 5.0 3.7
 0.8
 1.1
1.0
 3.1
2.0
 5.2
3.3
 4.3
3.4
 3.2
2.6
 7.2
4.5
 3.8
1.4
 3.9
3.5
 4.7
3.6
 4.2
2.4
 5.7
4.4
 2.1
2.0
 3.1
1.7
 4.5
1.8
 4.6
3.1
 3.4
2.5
35 arpc2 actin related protein 2/3 complex, subunit 2 327068 4.9 2.6
-0.1
 1.4
 4.4
 3.7
 2.4
 2.8
 3.3
 2.6
 4.1
 2.5
 4.6
 1.6
 1.9
 2.4
 2.2
 3.8
36 psma2b proteasome 20S subunit alpha 2b 403015 4.9 2.4
 2.2
 0.9
0.3
 1.0
0.6
 2.1
 0.2
 -0.0
 2.8
 1.8
 4.3
 5.6
 0.3
 2.8
 3.3
 1.7
 1.5
 1.1
 2.6
37 psmc6 proteasome 26S subunit, ATPase 6 321585 4.9 3.1
 1.4
 1.5
 1.1
 3.1
 -0.6
 -0.2
 4.5
 1.8
 5.4
 2.0
 1.9
 3.8
 2.1
 0.4
 1.7
-0.2
 3.3
 2.6
38 vcp valosin containing protein 327197 4.8 3.0
 1.4
 3.0
2.8
 0.1
0.1
 3.6
-0.8
 2.6
-1.0
 3.0
-1.6
 3.0
-0.1
 5.9
-0.3
 3.6
0.0
 4.2
1.1
 3.7
-1.5
 3.0
-2.1
 1.3
0.5
 2.2
-0.3
 1.5
-1.5
 3.4
2.2
 1.9
0.0
39 canx calnexin 406757 4.8 2.7
 1.8
 3.1
2.1
 1.4
-0.2
 4.3
0.2
 0.1
-1.0
 -0.1
-0.9
 6.1
0.0
 1.7
-0.5
 5.9
-0.3
 2.8
0.3
 1.4
0.7
 4.3
-1.0
 3.5
 0.2
 1.3
-1.0
 3.1
 -0.6
40 zgc:153867 zgc:153867 337226 4.8 3.1
 1.4
 0.6
-0.3
 1.2
0.7
 1.0
0.2
 2.6
1.3
 2.3
0.3
 0.6
-0.1
 2.2
0.5
 2.9
0.5
 1.0
0.4
 1.8
1.0
 0.1
-0.1
 1.6
1.3
 2.9
0.5
 5.4
0.1
 4.4
1.3
 6.4
41 actb1 actin, beta 1 57934 4.7 2.4
 2.0
 0.6
0.1
 0.8
0.6
 1.8
1.5
 5.6
4.5
 5.0
4.6
 4.8
1.9
 6.8
4.7
 2.3
2.0
 2.6
1.9
 5.5
5.3
 3.0
2.7
 2.0
1.5
 4.2
3.8
 4.0
2.2
 6.8
3.8
 1.8
0.8
42 gnb1b guanine nucleotide binding protein (G protein), beta polypeptide 1b 406796 4.7 2.5
1.8
0.8
 2.2
1.7
 2.5
2.3
 6.2
5.3
 5.6
2.5
 3.8
1.4
 5.0
0.3
 4.2
2.1
 4.3
2.2
 5.2
3.8
 3.6
1.1
 1.7
0.1
 4.1
3.5
 1.1
0.6
 4.9
1.2
 1.0
43 ddx61 DEAD (Asp-Glu-Ala-Asp) box helicase 61 100007313 4.7 2.9
 1.5
 0.9
0.8
 1.0
0.0
 2.1
 2.5
 1.3
 2.6
 1.6
 0.3
 -0.1
 -0.1
 2.2
 0.4
 0.6
 2.8
 3.6
 1.2
44 pfn2a profilin 2a 321383 4.7 2.2
 2.1
 3.9
1.7
 0.7
0.5
 2.8
-0.1
 5.5
1.0
 6.4
0.3
 1.1
0.6
 4.2
1.1
 1.6
1.3
 3.4
 4.4
0.4
 1.3
0.5
 0.8
0.6
 5.0
-0.6


45 atp6v1ba ATPase, H+ transporting, lysosomal, V1 subunit B, member a 359839 4.7 2.4
 1.9
 1.4
-1.0
 3.7
1.7
 2.3
1.1
 1.2
0.2
 2.4
0.0
 3.7
0.1
 2.5
-0.3
 4.4
-0.2
 2.3
 0.3
0.2
 2.6
-0.4
 4.5
-0.1
 1.7
-0.8
 1.9
 2.4
-0.6
 1.3
46 ube2f ubiquitin-conjugating enzyme E2F (putative) 406606 4.7 2.5
1.7
 2.4
 2.9
 -0.1
 -0.1
 1.2
 0.6
 1.7
 3.3
 -1.8
 1.5
 0.8
 1.3
1.7
47 ostc oligosaccharyltransferase complex subunit 393239 4.7 3.2
 1.1
 1.1
 0.8
 4.7
 -1.3
 -0.4
 4.3
 -0.1
 3.9
 3.8
 -0.7
 2.7
 0.8
0.2
 0.3
-0.6
 0.8

48 papss2b 3'-phosphoadenosine 5'-phosphosulfate synthase 2b 80939 4.7 2.6
 1.7
 1.2
0.8
 1.1
-0.0
 2.9
1.3
 0.5
0.2
 0.5
0.2
 2.3
1.0
 1.1
-0.5
 1.4
1.0
 1.9
0.4
 0.2
0.2
 0.1
-0.3
 1.7
1.0
 1.9
1.2
 0.6
 -0.4
 0.4
49 hnrnpaba heterogeneous nuclear ribonucleoprotein A/Ba 321466 4.7 2.0
 2.3
 1.8
1.6
 2.0
0.7
 2.7
2.4
 0.3
0.0
 0.3
-0.2
 3.5
2.6
 1.1
-0.7
 3.9
2.0
 2.6
2.5
 0.7
0.0
 3.5
2.1
 1.7
1.3
 1.4
1.2
 -1.9
 3.4
50 LOC100332095 la-related protein 4 100332095 4.6 2.4
1.8
1.8
 0.1
-0.5
 0.6
 -0.5
 0.0
-0.4
 3.4
2.5
 2.0
0.6
 4.0
1.6
 2.0
0.9
 1.0
-1.0
 0.2
-0.4
 2.2
0.3
 1.5
-1.3
 -1.5
 1.2
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