Orthologous genes in OrthoFinder**

Species Gene Description
 dre-u.3   lft1   lefty1 
 dre-r.3   lft1   lefty1 
 dre-m.5   lft1   lefty1 
 dre-u.3   lft2   lefty2 
 hsa-u.4   LEFTY1   left-right determination factor 1 
 mmu-u.4   Lefty1   left right determination factor 1 
 mmu-u.4   Lefty2   left-right determination factor 2 
 mcc-u.3   699676   left-right determination factor 2 
 mcc-u.3   699924   left-right determination factor 1 

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Top 50 coexpressed genes to lft1 (dre-u.3 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 dre4020   Calcium signaling pathway  4 265 2.39
 dre4310   Wnt signaling pathway  2 220 -
 dre4060   Cytokine-cytokine receptor interaction  2 221 -
 dre4010   MAPK signaling pathway  2 409 -
 dre4080   Neuroactive ligand-receptor interaction  3 586 -

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dre:lft1 (lefty1) External Links;


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Show Coexpressed Genes
UMAP
Gene Function KEGG Entrez
Gene
ID		 Other ID LINK Target Reference

dre-u.3
for
lft1
dre-r.3
for
lft1
dre-m.5
for
lft1
dre-u.3
for
lft2
hsa-u.4
for
LEFTY1
mmu-u.4
for
Lefty1
mmu-u.4
for
Lefty2
mcc-u.3
for
699676
mcc-u.3
for
699924
1 noto notochord homeobox 30260 5.4 2.6
 2.3
 3.4




2 lft2 lefty2 30146 5.3 2.8
 2.2
 5.3
5.3
 5.3
 3.5
 3.5
3 vox ventral homeobox 64807 5.1 2.8
 1.9
 4.6
3.5
 0.8

2.1
 1.8
4 her5 hairy-related 5 30285 5.0 2.5
 2.1
 4.2
0.9
 0.3



5 vent ventral expressed homeobox 64810 5.0 2.5
 2.2
 4.6
3.5
 0.8

2.1
 1.8
6 szl sizzled 353294 4.8 2.4
 2.0
 2.6




7 foxd5 forkhead box D5 30524 4.6 2.2
 2.1
 4.2
3.6
 3.0
1.5
 2.3
0.7
 2.3
1.1
 0.7
0.4
 -0.3
-0.5
8 tpbga trophoblast glycoprotein a 373095 4.6 1.6
 2.7
 1.4
0.4
 -0.1
 1.4
-1.0
 0.1
-0.8
 -1.4
 -1.5
9 si:dkey-238d18.15 si:dkey-238d18.15 108179262 4.3 2.3






10 nnr nanor 321023 4.2 2.2






11 mxtx1 mix-type homeobox gene 1 100149566 4.1 2.2
5.0
 0.1

1.4
0.4
 1.3
0.9
12 sp5a Sp5 transcription factor a 353154 4.1 1.6
 2.2
 2.9
1.1
 1.0
 -0.5
 0.5

13 foxi1 forkhead box i1 353313 4.0 2.0
 1.8
 4.2
3.6
 3.0
1.5
 2.3
0.7
 2.3
1.1
 0.7
0.4
 -0.3
-0.5
14 fgf3 fibroblast growth factor 3 30549 4.0 2.0
 1.8
 1.9
1.5
 -0.2
-0.5
 2.1
-0.4
 3.0
2.9
 -0.2
 -1.9
15 si:dkey-11o15.10 si:dkey-11o15.10 566004 4.0 2.1






16 wnt11f2 wnt 11, family member 2 791595 3.9 2.1
2.7
-1.3
 -0.3
 1.1
 0.7
 0.0
 1.3
17 msgn1 mesogenin 1 360135 3.9 1.3
 2.4
 2.2




18 tbx16 T-box transcription factor 16 30264 3.9 1.9
 1.7
 2.6
-0.0
 -0.1

19 her11 hairy-related 11 445409 3.9 2.1






20 LOC103911751 zinc finger protein 436-like 103911751 3.8 2.0






21 dkk1b dickkopf WNT signaling pathway inhibitor 1b 30197 3.7 2.3
 1.2
 2.4
-0.2
 -0.5
 -0.2
 2.3
 -0.1
 0.7
22 prdm12b PR domain containing 12b 492816 3.7 2.0
0.8
-1.1
 1.6

23 asb11 ankyrin repeat and SOCS box containing 11 791758 3.7 1.9
0.8
0.5
 1.6
0.2
 -0.3
-0.6
 -0.1
-0.7
 0.0
 -1.2
24 zic2b zic family member 2 (odd-paired homolog, Drosophila) b 570746 3.6 1.7
 1.7
 2.2
1.6
 1.7
0.9
 0.8
0.8
 2.8
2.0
 2.1
1.7
 1.6
1.3
25 otx2a orthodenticle homeobox 2a 30462 3.6 2.1
 1.3
 4.1
1.4
 1.5
0.3
 1.1
0.6
 3.1
1.2
 1.8
0.6
 1.0
-0.2
26 adora2aa adenosine A2a receptor a 561701 3.6 1.9
3.2
1.9
 0.5
0.1
 -0.1
-0.5
 0.7
-0.3
 0.4
-0.0
 1.3
0.4
27 irx7 iroquois homeobox 7 140746 3.6 2.0
 1.3
 3.6
0.8
 -1.2
 -1.4
 -1.3
 1.5
 0.7
28 si:dkey-228b2.6 si:dkey-228b2.6 563918 3.6 1.9
5.1
0.4
 0.0
-0.2
 1.3
0.1
 0.2
-0.9
 0.6
-0.5
 0.3
0.1
29 her7 hairy and enhancer of split related-7 58132 3.5 1.9
 1.4





30 ctsll cathepsin L, like 449826 3.5 1.6
 1.7
 1.9
1.7
 -0.2
-1.0
 0.6
 -0.4
 -0.0
-0.9
 -0.7
-1.5
31 foxd3 forkhead box D3 30548 3.5 1.8
 1.5
 4.2
3.6
 3.0
1.5
 2.3
0.7
 2.3
1.1
 0.7
0.4
 -0.3
-0.5
32 mxtx2 mix-type homeobox gene 2 58078 3.5 2.4
 0.8
 4.0
3.1




33 zgc:173816 zgc:173816 100126140 3.4 1.8






34 LOC101885485 uncharacterized LOC101885485 101885485 3.3 1.8






35 admp anti-dorsalizing morphogenic protein 140619 3.3 2.2
 0.9
 3.8




36 sox32 SRY-box transcription factor 32 116990 3.3 2.2
 0.9
 3.4
3.3
 1.2
1.0
 1.7
0.7
 3.3
1.2
 1.9
1.6
 1.6
1.4
37 LOC101884693 uncharacterized LOC101884693 101884693 3.3 1.8






38 si:rp71-45k5.2 si:rp71-45k5.2 560783 3.3 1.8






39 grm5a glutamate receptor, metabotropic 5a 568406 3.2 1.7
1.1
0.9
-0.5
 2.0
 0.4
 0.6
40 exd1 exonuclease 3'-5' domain containing 1 751755 3.2 1.7
2.2
0.3
 0.9

41 tbxta T-box transcription factor Ta 30399 3.2 1.9
 1.1
 1.6
 0.6
0.2

0.9
 0.8
42 ved ventrally expressed dharma/bozozok antagonist 368201 3.2 1.4
 1.6
 4.0
3.1




43 drll.3 draculin-like, tandem duplicate 3 555591 3.2 1.7






44 mapk12b mitogen-activated protein kinase 12b 557810 3.1 1.7
1.2
0.1
 0.8
-0.4
 1.2
0.6
 0.9
-0.7
 1.6
0.5
 0.0
-0.5
45 chrna2a cholinergic receptor, nicotinic, alpha 2a (neuronal) 678575 3.1 1.7
1.5
0.8
 1.5
1.0
 -0.2
-0.7
 1.1
0.7
 1.7
0.0
 1.5
-0.6
46 foxb1a forkhead box B1a 30542 3.1 1.7
 1.3
 4.2
3.6
 3.0
1.5
 2.3
0.7
 2.3
1.1
 0.7
0.4
 -0.3
-0.5
47 cxcr4a chemokine (C-X-C motif) receptor 4a 140747 3.1 1.2
 1.7
 2.4
0.7
 0.3
 -1.0
 0.3
 0.8
 0.3
48 LOC108190726 uncharacterized LOC108190726 108190726 3.1 1.7






49 nms neuromedin S 100272161 3.1 1.7
-0.1




50 zgc:100951 zgc:100951 445228 3.1 1.6
1.9
1.7




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