Orthologous genes in OrthoFinder**

Species Gene Description
 dre-u.3   usp15   ubiquitin specific peptidase 15 
 dre-r.3   usp15   ubiquitin specific peptidase 15 
 dre-u.3   usp4   ubiquitin specific peptidase 4 (proto-oncogene) 
 dre-u.3   usp11   ubiquitin specific peptidase 11 
 hsa-u.4   USP15   ubiquitin specific peptidase 15 
 hsa-u.4   USP4   ubiquitin specific peptidase 4 
 hsa-u.4   USP11   ubiquitin specific peptidase 11 
 mmu-u.4   Usp4   ubiquitin specific peptidase 4 (proto-oncogene) 
 mmu-u.4   Usp11   ubiquitin specific peptidase 11 
 rno-u.3   Usp4   ubiquitin specific peptidase 4 
 rno-u.3   Usp11   ubiquitin specific peptidase 11 
 rno-u.3   Usp15   ubiquitin specific peptidase 15 
 gga-u.3   USP4   ubiquitin specific peptidase 4 
 gga-u.3   USP15   ubiquitin specific peptidase 15 
 mcc-u.3   USP4   ubiquitin specific peptidase 4 
 mcc-u.3   USP11   ubiquitin specific peptidase 11 
 cfa-u.3   USP4   ubiquitin specific peptidase 4 
 cfa-u.3   USP11   ubiquitin specific peptidase 11 
 cel-u.3   H34C03.2   Ubiquitin carboxyl-terminal hydrolase 
 sce-u.3   UBP12   putative ubiquitin-specific protease UBP12 

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Top 50 coexpressed genes to usp15 (dre-u.3 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 dre4120   Ubiquitin mediated proteolysis  3 156 2.18
 dre3008   Ribosome biogenesis in eukaryotes  2 77 -
 dre3013   Nucleocytoplasmic transport  2 110 -
 dre3040   Spliceosome  1 143 -
 dre4530   Tight junction  2 249 -

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dre:usp15 (ubiquitin specific peptidase 15) External Links;


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Show Coexpressed Genes
UMAP
Gene Function KEGG Entrez
Gene
ID		 Other ID LINK Target Reference

dre-u.3
for
usp15
dre-r.3
for
usp15
dre-u.3
for
usp4
dre-u.3
for
usp11
hsa-u.4
for
USP15
hsa-u.4
for
USP4
hsa-u.4
for
USP11
mmu-u.4
for
Usp4
mmu-u.4
for
Usp11
rno-u.3
for
Usp4
rno-u.3
for
Usp11
rno-u.3
for
Usp15
gga-u.3
for
USP4
gga-u.3
for
USP15
mcc-u.3
for
USP4
mcc-u.3
for
USP11
cfa-u.3
for
USP4
cfa-u.3
for
USP11
cel-u.3
for
H34C03.2
sce-u.3
for
UBP12
1 kdm5a lysine (K)-specific demethylase 5A 100333310 7.5 3.9
 3.5
1.9
 1.2
1.1
 2.7
0.7
 2.2
2.0
 5.7
1.8
 3.1
2.4
 1.3
0.4
 2.2
1.6
 2.8
0.4
 0.2
 1.9
1.3
 0.3
0.1
 3.5
1.8
 2.5
1.5
 1.9
0.8
 3.1
1.9
 2.2
 2.4
0.0
2 LOC103909792 NEDD4-like E3 ubiquitin-protein ligase WWP1 103909792 7.5 3.9

















3 kdm6al lysine (K)-specific demethylase 6A, like 569207 7.4 3.9
 0.9
0.5
 1.4
0.3
 3.9
1.0
 1.0
0.7
 2.7
2.4
 0.2
-0.6
 0.7
0.4
 0.8
0.3
 0.3
0.1
 0.7
0.4
 -1.4
-1.8
 3.1
0.1
 1.5
1.2
 0.6
0.6
 1.9
-0.0
 3.1
2.8
 1.9
-0.2
 0.7
4 si:zfos-932h1.3 si:zfos-932h1.3 100329491 7.4 3.8
 2.6
1.3
 2.4
1.7
 0.3
 1.9
 4.2
 1.2
 1.3
 0.4
 0.1
 1.1
 -0.2
 1.3
 0.7
 0.5
 1.8
 2.6

5 phtf2 putative homeodomain transcription factor 2 432376 6.9 3.6
 1.0
0.6
 3.0
-0.2
 3.2
0.6
 1.3
1.0
 0.6
-0.4
 0.5
0.3
 1.9
-1.0
 0.3
-0.3
 0.4
-0.7
 1.6
-0.2
 -0.7
-0.8
 3.7
-0.2
 2.8
0.7
 0.4
-1.3
 -0.1
-0.8
 1.1
-0.4

6 pdhx pyruvate dehydrogenase complex component X 393532 6.9 3.6
 0.5
 0.1
 0.2
 -1.0
 0.6
 1.1
 -1.1
 1.1
 -1.4
 3.9
 1.9
 3.9
 1.3
 0.3
 2.7
 -0.6

7 crybg3 crystallin beta-gamma domain containing 3 101882057 6.3 3.3
 -0.1
 0.2
 1.3
 0.3
 -1.5
 0.5
 -1.3
 -0.4
 -0.6
 -0.2
 1.2
 -0.8
 -0.4
 -0.5
 -0.6
 0.0

8 marf1 meiosis regulator and mRNA stability factor 1 100005105 6.3 3.3
 -0.0
 -0.2
 1.5
 4.0
 0.9
 0.4
 0.6
 1.1
 -0.1
 -1.1
 0.7
 2.8
 -0.1
 0.9
 -0.9
 1.7

9 zer1 zyg-11 related, cell cycle regulator 405837 6.3 3.3
 1.8
 1.5
 0.3
 0.6
 3.3
 -0.1
 1.8
 1.6
 3.8
 0.9
 2.5
 0.6
 1.5
 1.8
 0.9
 3.7
 2.3
10 fem1c fem-1 homolog c 378965 6.3 3.3
 2.3
-0.7
 0.2
0.2
 2.4
1.1
 0.3
-0.1
 0.7
-0.8
 2.8
1.0
 -0.1
-0.8
 3.7
-0.0
 -0.6
-0.7
 4.1
1.3
 3.1
0.3
 2.7
0.6
 0.7
0.6
 -1.0
-1.3
 0.6
-0.7
 0.2
-0.0
 2.4
11 pggt1b protein geranylgeranyltransferase type I, beta subunit 570808 6.1 3.2
 0.3
 -0.4
 3.7
 1.1
 -0.7
 0.8
 -1.5
 1.8
 1.4
 1.1
 1.0
 0.7
 2.2
 -0.9
 1.6
 -0.6
0.6
12 whamm WAS protein homolog associated with actin, golgi membranes and microtubules 110438074 6.0 3.2
 1.6
 0.5
 2.0
 0.1
 0.2
 -0.2
 -0.6
 0.5
 -1.3
 1.2
 0.3
 3.6
 0.2
 0.3
 -1.3
 -0.8

13 tstd2 thiosulfate sulfurtransferase like domain containing 2 100151606 6.0 3.1
 1.3
 -1.0
 1.0
 1.2
 3.8
 1.8
 0.1
 2.0
 0.5
 -0.6
 1.2
 -0.2
 0.2
 3.1
 3.6
 -0.1

14 prkab2 protein kinase, AMP-activated, beta 2 non-catalytic subunit 100170795 5.7 3.0
 0.9
-0.3
 1.3
0.8
 1.7
0.4
 1.6
-0.9
 2.4
-1.1
 1.3
1.2
 0.6
-0.2
 2.1
-0.4
 -0.1
-0.7
 1.3
-0.6
 1.1
-0.6
 1.5
-1.6
 3.2
0.0
 0.4
-0.4
 2.4
-1.3
 1.2
0.9
 1.3
0.0
 0.5
-0.1
15 tcerg1a transcription elongation regulator 1a (CA150) 323071 5.7 3.0
 0.1
0.1
 2.4
-0.1
 2.8
 0.1
 -0.2
 0.2
 0.9
 0.6
 0.0
 0.1
 -0.8
 3.2
 1.6
 1.9
 0.7
 1.1
 3.1
 0.3
16 utp18 UTP18 small subunit processome component 767797 5.7 3.0
 0.7
 -1.3
 1.6
 0.0
 -0.0
 1.2
 -1.5
 0.1
 -1.5
 0.5
 0.8
 0.6
 -1.2
 0.8
 0.4
 0.1
 0.3
 -0.1
17 LOC100333206 unconventional myosin-XVIIIb-like 100333206 5.7 3.0

















18 pcnx1 pecanex 1 794337 5.5 2.9
 1.7
-0.7
 0.9
-0.6
 2.6
 2.3
 1.1
 1.0
0.6
 1.3
0.0
 2.5
0.8
 -0.1
-0.5
 1.0
-0.2
 2.0
0.1
 1.2
0.1
 1.2
-0.1
 1.1
0.9
 1.3
-0.8
 0.7
-0.2
 0.3
19 atxn3 ataxin 3 394079 5.5 2.9
 -1.6
 0.2
 0.6
 0.8
 0.6
 0.2
 -1.2
 -0.3
 -0.7
 1.4
 0.8
 2.3
 2.2
 -1.5
 0.8
 -0.6
 -0.0
20 anks6 ankyrin repeat and sterile alpha motif domain containing 6 449657 5.4 2.9
 -0.3
 0.1
 -2.8
 -1.7
 0.2
 -0.7
 -0.2
 -0.7
 -0.4
 -1.0
 -1.3
 -1.4
 0.3
 0.2
 -0.5
 0.2

21 cul4a cullin 4A 394002 5.4 2.8
 5.0
2.1
 2.3
0.7
 2.1
1.4
 2.1
0.6
 1.9
-0.7
 2.6
0.7
 1.4
0.3
 3.7
1.1
 1.8
0.6
 2.7
1.7
 1.2
1.1
 6.6
4.6
 1.4
0.2
 0.8
0.4
 1.1
-0.1
 1.5
0.9
 3.7
0.4
 0.4
22 clk2b CDC-like kinase 2b 767784 5.4 2.8
 0.9
0.4
 1.6
0.0
 3.0
2.6
 2.3
1.6
 1.7
0.8
 3.3
1.1
 0.9
0.8
 0.6
-0.2
 0.7
0.1
 2.6
1.5
 1.3
1.1
 3.5
1.5
 0.6
-0.1
 2.3
-0.6
 1.8
0.1
 4.1
2.5
 1.8
 -0.7
23 pdpr pyruvate dehydrogenase phosphatase regulatory subunit 100330789 5.3 2.8
 -0.4
 0.4
 -0.2
 1.6
 1.0
 0.6
 -0.1
 1.6
 0.4
 2.2
 1.7
 -0.1
 2.8
 -0.3
 0.5
 1.0
 0.3
24 slc30a6 solute carrier family 30 member 6 402949 5.3 2.8
 0.7
 0.3
 0.4
 -0.1
 -0.4
 0.8
 -0.3
 -0.9
 0.1
 -0.9
 0.6
 0.7
 0.5
 -0.4
 -0.5
 -1.7
 3.1
25 riox2 ribosomal oxygenase 2 393308 5.3 2.8
 0.5
 -0.6
 0.5
 1.5
 -2.0
 1.2
 -1.3
 0.7
 -1.8
 2.0
 1.5
 0.6
 0.7
 0.4
 -0.9
 1.5

26 sbno1 strawberry notch homolog 1 (Drosophila) 100005813 5.2 2.7
 5.0
-0.6
 1.9
1.5
 2.2
1.0
 0.2
-0.3
 -0.4
-1.0
 1.6
 -0.3
 1.9
-0.2
 -0.2
-1.7
 3.5
-0.1
 1.5
 5.1
-0.7
 2.9
-0.2
 0.9
-0.2
 1.8
0.3
 1.0
0.0
 3.6
27 keap1b kelch-like ECH-associated protein 1b 100003679 5.1 2.7
 0.5
 0.4
 -1.4
 0.6
 1.8
 2.8
 -0.0
 2.9
 0.7
 0.8

-1.2
 0.8
 2.8
 2.5

28 fxr1 fragile X mental retardation, autosomal homolog 1 327220 5.1 2.7
 2.7
1.9
 1.8
0.3
 1.4
0.4
 0.6
0.6
 3.2
2.7
 1.2
-0.2
 1.9
0.7
 2.2
1.5
 1.1
-0.6
 7.3
0.9
 1.9
0.7
 7.4
3.3
 1.6
0.8
 2.4
0.6
 0.9
0.8
 2.8
2.3
 0.6
29 clasp2 cytoplasmic linker associated protein 2 404604 5.1 2.7
 1.2
0.8
 2.0
0.2
 1.0
0.3
 3.5
2.4
 1.8
1.7
 1.3
0.2
 1.8
1.6
 2.2
1.2
 2.4
2.2
 1.0
 0.8
-0.2
 3.2
2.8
 1.1
0.8
 2.0
0.8
 2.5
1.1
 2.1
-0.1
 2.2
-0.2
30 zmp:0000000755 zmp:0000000755 557305 5.1 2.7
 1.2
0.8
 1.7
0.9
 -0.0
-1.1
 3.3
-1.2
 2.3
0.5
 1.0
0.7
 3.7
0.3
 1.6
1.6
 4.5
0.4
 0.1
-0.4
 0.1
0.0
 0.7
0.0
 0.8
-1.2
 3.8
-0.3
 1.2
-1.3
 2.6
2.1
 3.2
31 fsd2 fibronectin type III and SPRY domain containing 2 110438116 5.1 2.7
 0.4
 -1.5


-0.3
 0.6
 0.5
 -0.1
 1.3
 0.3
 0.8
 -0.8
 -0.3
 -0.6
 -0.3

32 pus7 pseudouridine synthase 7 402995 5.1 2.7
 0.6
 -0.1
 0.6
 -1.3
 -1.1
 -0.3
 -0.5
 0.9
 0.1
 -0.3
 0.3
 1.5
 -0.3
 0.4
 0.4
 -1.9
 0.6
 -0.1
33 wdr20a WD repeat domain 20a 569192 5.1 2.7
 1.3
1.2
 3.9
1.9
 -0.9
 -0.7
 2.4
 0.2
 1.9
 1.6
-0.2
 2.3
-1.1
 1.3
0.3

0.5
 2.3
 -1.5
 1.4
 6.6
34 tnpo3 transportin 3 394062 5.1 2.7
 4.0
 2.8
 0.3
 2.6
 1.3
 2.5
 0.2
 4.6
 -1.1
 2.2
 0.5
 1.0
 1.5
 0.8
 0.4
 0.5
 2.0
 5.5
35 fbxl3b F-box and leucine-rich repeat protein 3b 450055 5.1 2.7
 0.1
-0.3
 -0.5
-1.1
 3.4
 2.2
 0.4
 0.1
 -0.1
 0.9
-0.1
 1.3
-1.2
 1.8
-1.3
 0.1
-1.1
 2.7
1.9
 0.8
 0.6
 0.2
 0.4
 -1.7
36 dusp16 dual specificity phosphatase 16 406523 5.1 2.7
 1.3
0.0
 1.6
-1.2
 0.4
0.3
 -0.4
-1.4
 0.9
0.8
 0.8
0.7
 0.3
-0.8
 1.9
-0.3
 -0.2
-1.4
 1.7
0.4
 0.8
-0.2
 0.0
-1.2
 -0.2
-0.8
 2.8
-0.5
 1.0
-0.9
 0.6
0.2
 -0.6
37 ppp4r3b protein phosphatase 4, regulatory subunit 3B 336198 5.0 2.6
 3.9
2.5
 3.9
0.5
 2.9
0.6
 0.5
-0.1
 0.0
-1.0
 2.1
0.4
 -0.6
-2.2
 0.8
-0.2
 -1.5
-2.1
 3.8
3.2
 1.9
1.4
 2.4
1.9
 1.5
-0.1
 -1.3
-2.7
 2.6
-0.4
 0.0
-0.2
 1.0
 0.9
38 helz helicase with zinc finger 406550 5.0 2.6
 1.9
 -0.1
 2.7
 0.6
 0.4
 0.3
 1.4
 1.1
 1.2
 0.9
 -0.1
 2.5
 2.1
 0.1
 1.6
 1.5

39 rtn4b reticulon 4b 678586 5.0 2.6
 3.6
1.0
 1.2
-0.7
 -0.9
 0.1
 0.7
 0.3
-0.7
 1.3
0.7
 -1.1
 2.6
 -1.5
 -1.7
-1.8
 -0.0
-1.4
 0.2
-0.3
 1.7
1.1
 -0.8
-1.9
 2.0
0.6
 1.0
 0.3
-0.9
40 surf4 surfeit 4 394102 5.0 2.6
 3.0
-0.7
 0.2
-1.1
 -1.8
 -1.9
 0.4
 1.1
 -0.9
 1.2
 -0.6
 -0.2
 1.2
 -1.9
 -0.6
 0.7
 1.2
 0.7
 3.3
0.2
 -1.8
41 tbl3 transducin beta like 3 492761 4.9 2.6
 2.1
 -1.3
 0.6
 -0.1
 1.6
 3.3
 -0.4
 0.7
 0.1
 0.4
 2.0
 -1.3
 0.3
 1.4
 0.7
 1.9
 0.8
 1.2
42 fnip1 folliculin interacting protein 1 324863 4.9 2.6
 0.9
-0.7
 -0.3
-0.6
 3.6
1.9
 1.6
0.4
 -0.5
-1.1
 1.0
-1.0
 -0.8
-2.3
 0.8
-0.2
 -0.8
-2.2
 3.5
0.6
 0.7
0.4
 1.7
1.0
 2.8
1.2
 0.3
-1.3
 1.6
0.2
 1.5
-0.1
 1.8
43 LOC108179221 DEAD-box helicase 41 108179221 4.9 2.6
 0.6
 0.8
 -0.1
 2.8
 2.2
 2.8
 0.6
 1.6
 0.1
 -0.2
 1.8
 -0.4
 0.6
 3.0
 -0.5
 4.4
 1.0
44 terfa telomeric repeat binding factor a 192316 4.9 2.6
 -1.8
 0.3
 -1.6
 0.9
 3.8
 -0.4
 3.3
 -0.1
 1.3
 0.3
 0.2
 -0.1
 0.8
 2.7
 1.7
 0.5

45 si:ch211-261d7.3 si:ch211-261d7.3 100537473 4.9 2.6
 0.4
 -0.4
 -1.1
 -1.2
 -1.2
 -0.3
 0.2
 -0.9
-1.1
 0.1
0.1
 -0.5
-0.8
 0.2
-0.3
 -0.6
-0.8
 -2.2
 0.6



46 aamp angio-associated, migratory cell protein 405874 4.9 2.6
 -1.0
 -1.8
 0.3
 0.3
 2.2
 2.6
 1.2
 1.0
 2.4
 -0.2
 2.6
 -0.8
 -0.2
 2.6
 1.6
 1.6
 1.0
 1.4
0.4
47 txndc15 thioredoxin domain containing 15 100073339 4.8 2.5
 -0.1
 -0.2
 -1.9
 -0.6
 0.7
 0.9
 -0.8
 0.4
 -0.0
 -1.0
 0.5
 1.1
 -0.3
 0.1
 -0.7
 0.5
 1.1
48 bysl bystin-like 394081 4.8 2.5
 1.0
 -1.7
 -0.1
 0.1
 1.9
 2.7
 -1.6
 1.3
 -0.6
 0.8
 3.0
 -0.7
 0.7
 0.9
 1.0
 1.1
 -0.1
 0.5
49 nup133 nucleoporin 133 406852 4.8 2.5
 3.3
 1.0
 -0.9
 -0.4
 1.8
 2.0
 1.5
 -0.2
 -0.1
 1.4
 1.9
 0.9
 -0.4
 2.5
 -1.0
 0.7
 4.4
 2.5
50 lims2 LIM and senescent cell antigen-like domains 2 553696 4.8 2.5
 0.8
0.4
 2.1
1.2
 1.3
0.5
 1.7
0.9
 1.7
0.7
 0.7
0.3
 1.1
1.0
 0.8
0.6
 1.4
0.1
 0.7
0.6
 1.9
1.0
 1.7
1.0
 2.6
0.6
 1.3
1.3
 1.5
1.2
 1.2
1.0
 0.8
-0.7
 1.5
0.7
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