Orthologous genes in OrthoFinder**

Species Gene Description
 dre-u.3   zgc:162999   zgc:162999 
 dre-r.3   zgc:162999   zgc:162999 
 dre-u.3   pcbp3   poly(rC) binding protein 3 
 dre-u.3   zgc:110045   zgc:110045 
 hsa-u.4   PCBP3   poly(rC) binding protein 3 
 hsa-u.4   PCBP4   poly(rC) binding protein 4 
 hsa-u.4   PCBP1   poly(rC) binding protein 1 
 mmu-u.4   Pcbp4   poly(rC) binding protein 4 
 mmu-u.4   Pcbp3   poly(rC) binding protein 3 
 mmu-u.4   Pcbp2   poly(rC) binding protein 2 
 rno-u.3   Pcbp3   poly(rC) binding protein 3 
 rno-u.3   Pcbp4   poly(rC) binding protein 4 
 gga-u.3   PCBP3   poly(rC) binding protein 3 
 gga-u.3   PCBP4   poly(rC) binding protein 4 
 gga-u.3   420965   poly(rC) binding protein 2 
 mcc-u.3   PCBP2   poly(rC) binding protein 2 
 mcc-u.3   PCBP4   poly(rC) binding protein 4 
 cfa-u.3   PCBP1   poly(rC) binding protein 1 
 dme-u.3   mub   mushroom-body expressed 
 cel-u.3   pes-4   Patterned Expression Site 
 sce-u.3   PBP2   Pbp2p 
 spo-u.3   rnc1   RNA-binding protein 

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Top 50 coexpressed genes to zgc:162999 (dre-u.3 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 dre340   Histidine metabolism  1 26 -
 dre1230   Biosynthesis of amino acids  1 92 -
 dre830   Retinol metabolism  1 93 -
 dre230   Purine metabolism  1 165 -
 dre1240   Biosynthesis of cofactors  1 202 -

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dre:zgc:162999 (zgc:162999) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
UMAP
Gene Function KEGG Entrez
Gene
ID		 Other ID LINK Target Reference

dre-u.3
for
zgc:162999
dre-r.3
for
zgc:162999
dre-u.3
for
pcbp3
dre-u.3
for
zgc:110045
hsa-u.4
for
PCBP3
hsa-u.4
for
PCBP4
hsa-u.4
for
PCBP1
mmu-u.4
for
Pcbp4
mmu-u.4
for
Pcbp3
mmu-u.4
for
Pcbp2
rno-u.3
for
Pcbp3
rno-u.3
for
Pcbp4
gga-u.3
for
PCBP3
gga-u.3
for
PCBP4
gga-u.3
for
420965
mcc-u.3
for
PCBP2
mcc-u.3
for
PCBP4
cfa-u.3
for
PCBP1
dme-u.3
for
mub
cel-u.3
for
pes-4
sce-u.3
for
PBP2
spo-u.3
for
rnc1
1 otx5 orthodenticle homolog 5 353179 8.5 4.5
 2.7
2.2
 6.5
5.9
 0.5
-0.6
 0.8
0.5
 0.6
-0.6
 1.2
0.4
 0.9
0.5
 0.7
0.6
 0.9
0.4
 1.2
0.5
 1.8
-0.1
 1.6
0.9
 1.0
0.2
 1.1
-1.1
 1.3
0.2
-0.3
 3.3
2.9
1.1
2 pax10 paired box 10 100192208 8.4 4.4
 2.3
1.4
 4.7
2.3
 0.4
 0.7
 -0.8
 1.0
 -1.2
 -0.3
 -0.6
 1.3
 1.1
-0.5
 0.2
0.1
 -0.4
-1.3

0.0
 1.6
0.8
 1.8
1.2
 1.7
0.5
 -1.0
3 si:dkeyp-41f9.4 si:dkeyp-41f9.4 100004079 7.7 4.0
 1.0
0.2
 3.0
0.9
 0.7
 0.1
 -0.3
 -0.7
 -0.1
 -0.2
 -0.4
 0.9
 1.4
 1.8
 1.9
 -1.6
 1.3
0.4


4 vsx1 visual system homeobox 1 homolog, chx10-like 30598 7.6 3.9
 2.8
1.2
 5.6
3.7
 -0.4
 0.2
 -1.2
 0.2
 0.8
 -0.3
 0.4
 1.0
 1.0
0.6
 0.5
0.1
 1.3
-0.1


1.5
 0.7

5 LOC100006777 protocadherin-10 100006777 7.4 3.8
 2.7
2.3
 2.8
2.1







2.2
 1.1
 0.2






6 crx cone-rod homeobox 81881 7.2 3.7
 2.7
2.2
 6.5
5.9
 0.5
-0.6
 0.8
0.5
 0.6
-0.6
 1.2
0.4
 0.9
0.5
 0.7
0.6
 0.9
0.4
 1.2
0.5
 1.8
-0.1
 1.6
0.9
 1.0
0.2
 1.1
-1.1
 1.3
0.2
-0.3
 3.3
2.9
1.1
7 gnb3a guanine nucleotide binding protein (G protein), beta polypeptide 3a 436710 7.1 3.7
 3.3
0.9
 3.6
0.8
 2.1
1.1
 2.0
1.5
 4.9
3.3
 1.8
1.3
 2.8
1.3
 4.0
1.8
 2.2
1.6
 1.7
1.4
 0.5
0.4
 1.7
1.2
 0.6
0.4
 2.3
1.9
 2.3
0.1
 2.6
1.8
 1.9
 1.3
-0.2
 0.9
8 rs1a retinoschisin 1a 445044 6.9 3.6
 2.0
0.9
 1.3
1.1
 -0.6
 -1.0
 -0.7
 -0.1
 -0.5
 0.6

-0.7
 0.6
 0.3






9 six7 SIX homeobox 7 30625 6.9 3.6
 2.3
1.8
 3.6
3.5
 0.2
0.1
 0.7
-0.2
 0.5
-0.7
 -0.3
 -0.7
 -0.1
 -0.9
 0.2
 1.2
1.2
 0.9
0.7
 1.5
0.1
 -0.1
 -0.3
-0.5
 -0.2
-0.6
10 pcdh8 protocadherin 8 30456 6.4 3.4
 2.4
1.8
 1.4
0.1
 0.2
 -0.2
 -0.3
 -0.6
 0.5
 0.3
 0.3
 0.3
 0.0
 0.6
 2.4
 -1.0
 -0.2
 -0.6



11 si:ch73-29l19.1 si:ch73-29l19.1 100148308 6.4 3.3
 2.8
-0.7
 1.7
0.1
 0.9
 -0.1
 -0.3




0.1
 -1.0
 -0.6
 0.2
 1.1




12 nr2e3 nuclear receptor subfamily 2, group E, member 3 492496 6.3 3.3
 0.9
0.8
 4.8
1.7
 0.0
-0.5
 1.5
1.1
 1.8
0.3
 3.7
1.5
 0.8
0.2
 0.3
0.2
 -0.3
-0.8
 2.7
2.1
 0.8
0.1
 2.1
1.9
 0.7
0.6
 -0.0
-0.5
 0.2
0.1
 1.6
0.3
 1.0
-0.2
 1.9
0.5

13 samd7 sterile alpha motif domain containing 7 563729 6.3 3.3
 1.2
 3.4


-0.5
 0.0
 0.1







1.8


14 si:dkey-283b15.2 si:dkey-283b15.2 569313 6.1 3.2
 2.2
1.6
 2.9
-0.3
 1.3
 -0.5
 0.3
 -0.1
 0.9
 -0.7
 1.6
 -0.2
 0.2
 -0.4
 -0.7
 -0.6
 -0.3
 0.3



15 bhlhe23 basic helix-loop-helix family, member e23 559796 6.0 3.2
 2.0
0.9
 3.6
2.6
 0.4
 -0.3
 -0.0
 1.0
 0.3
 -0.6
 -0.3
 1.0
 -0.1
-0.8
 1.1
-0.8
 0.3
-0.0
 0.0
-0.2
 0.3
-0.4
-0.3
 0.9
0.8
2.2
16 zgc:110045 zgc:110045 664755 6.0 3.1
 3.8
2.4
 6.0
2.8
 1.2
0.1
 -0.3
-0.7
 10.9
0.1
 1.8
0.8
 1.7
0.8
 5.2
1.8
 4.0
1.2
 4.0
1.0
 1.3
1.1
 1.5
1.3
 1.5
1.1
 5.5
0.6
 0.6
-2.0
 4.7
-0.8



17 LOC101883939 uncharacterized LOC101883939 101883939 5.9 3.1
 1.1
 4.0







-0.6
 -0.0
 -0.4






18 ccdc88aa coiled-coil domain containing 88Aa 100329473 5.8 3.1
 3.6
0.4
 2.7
2.1
 -0.4
-0.7
 0.3
-0.8
 0.4
-0.0
 -0.6
 1.1
 -0.4
 1.4
-0.2
 0.9
0.4
 -0.3
-1.4
 2.0
0.5
 0.8
0.1
 0.3
-1.6
 1.1
-0.2
 1.8
0.9
 2.2
 1.5

19 LOC101886429 afadin-like 101886429 5.8 3.0
 1.2
-0.9
 4.6
0.9
 -0.5
 0.9
 0.6
 1.4
 -0.1
 1.4
 0.2
 -0.0
 -0.1
 0.2
 0.5
 1.1
 -0.1
 1.2
 3.1
 2.7
 0.9
20 hmx1 H6 family homeobox 1 797503 5.6 3.0
 1.7
-1.2
 2.5
0.9
 -0.3
 -0.4
 -0.1










0.1

1.8
21 stxbp1b syntaxin binding protein 1b 557717 5.6 2.9
 4.0
0.7
 2.7
0.8
 2.9
0.6
 0.1
-0.6
 1.8
1.7
 1.8
-0.7
 4.6
0.1
 1.0
0.2
 2.9
-0.7
 1.7
-0.1
 0.5
-0.3
 -0.2
-0.8
 0.7
-1.0
 -0.4
-0.6
 0.7
0.7
 0.1
-0.1
 0.3
 0.2
-2.5
 1.3
22 lhx3 LIM homeobox 3 30455 5.6 2.9
 2.4
2.0
 4.6
3.9
 0.1
 -0.5
 -0.1


0.8
0.3
 0.7
0.2
 0.1
0.1
 0.7
-1.6
 1.0
0.9
 -2.5
 0.5
-0.6
 1.2
-0.7
23 si:dkey-162b23.4 si:dkey-162b23.4 571064 5.5 2.9
 2.0
 4.2
 0.6
 0.6
 -1.5
 1.0
-0.8
 0.7
0.5
 0.1
-0.5
 0.7
0.7
 0.9
0.3
 -1.7
 2.5
 1.3
 -0.6
 0.3
 -0.9
-1.7
 -0.6
-2.2
 -0.5
-0.6

24 wasf3a WASP family member 3a 562750 5.4 2.9
 3.5
2.9
 3.4
2.0
 2.7
 0.6
 0.2
 1.3
 1.1
 -0.2
 0.6
 0.9
 1.4
0.0
 -1.0
-1.3
 1.5
-0.5
 1.1
 0.2
 -0.1
 3.6
 1.4

25 zdhhc8a zinc finger DHHC-type palmitoyltransferase 8a 555918 5.4 2.8
 2.3
1.0
 3.1
0.5
 0.8
-1.0
 2.9
-0.8
 1.5
0.8
 2.8
0.2
 1.3
-0.5
 1.4
0.8
 2.8
1.6
 2.9
0.1
 0.7
-0.2
 0.4
-0.6
 1.0
-0.5
 2.4
1.1
 1.2
-2.3
 4.8
1.5
 2.9
 0.5

26 LOC556653 uncharacterized LOC556653 556653 5.4 2.8



















27 impg1b interphotoreceptor matrix proteoglycan 1b 558797 5.3 2.8
 4.0
0.9
 3.1
1.7
 -0.9
 0.6
 -1.1
 -1.0
 -0.1
 0.8
 0.4
 1.0
 0.2
 -0.2
 -0.4
 0.5
 -1.0




28 ly6pge lymphocyte antigen 6 family member pge 569792 5.3 2.8
 2.2
 2.9







-0.2
 -0.4
 -0.2






29 prdm1b PR domain containing 1b, with ZNF domain 110437762 5.3 2.8
 1.3
-0.4
 4.9
1.8
 0.2
 1.1
 1.0
 -0.2
 0.2
 -0.4
 -0.2
 -2.0
 0.7
 1.4
 -1.0
 0.5
 -0.6
 0.9
 0.5
 1.7

30 sept4a septin 4a 556486 5.3 2.8
 3.4
1.3
 3.6
1.5
 2.6
1.0
 2.7
2.0
 2.9
0.5
 1.5
1.4
 2.4
1.5
 0.7
0.4
 1.1
0.5
 2.0
1.2
 1.8
1.5
 2.7
0.1
 3.5
0.8
 2.1
0.8
 1.8
1.5
 4.7
0.4
 2.2
-0.3
 -1.3
 3.7
2.5
 0.5
-0.4
31 tmem244 transmembrane protein 244 556137 5.3 2.8
 2.8
 1.5

















32 zgc:153441 zgc:153441 751745 5.2 2.8
 1.8
1.6
 1.5
1.2
 0.2
-0.4
 0.1
-0.4
 1.5
1.0
 1.5
1.3
 0.9
0.7
 0.3
-0.3
 0.9
0.8
 2.2
1.3
 1.2
0.7
 0.4
0.2
 0.9
-0.1
 0.8
0.8
 1.1
0.6
 1.2
0.3
 1.6
0.2
 1.8
0.6
 -1.5
33 kctd5b potassium channel tetramerization domain containing 5b 100334206 5.2 2.7
 1.3
0.7
 4.5
0.4
 0.8
0.4
 2.4
0.4
 0.9
0.5
 4.3
1.1
 2.9
1.1
 1.2
1.2
 1.7
1.1
 2.8
1.5
 1.0
-0.1
 0.1
-1.5
 -0.0
-0.3
 0.4
-0.2
 1.9
1.8
 -0.1
-0.1
 -1.0
 3.9

34 opn6a opsin 6, group member a 780836 5.2 2.7
 3.4
 1.4







1.1
 0.4
 0.9






35 zgc:109965 zgc:109965 619266 5.2 2.7
 1.6
-0.7
 2.8
-0.8
 -0.2
 0.3
 -0.5
 2.1
 0.3
 0.4
 0.6
 1.3
 0.4
 -1.2
 -0.6
 -0.1
 0.6
 1.0
 1.1
 -2.4

36 lactbl1a lactamase, beta-like 1a 568717 5.2 2.7
 2.1
1.7
 1.0
0.5







-0.1
 -0.4
 1.4






37 rx2 retinal homeobox gene 2 30473 5.1 2.7
 1.0
0.7
 4.3
2.6
 0.1
 -0.6
 -0.1




1.8
 0.5
 0.1
 -1.0
 1.4
0.1
 1.6

38 lim2.5 lens intrinsic membrane protein 2.5 541395 5.1 2.7
 1.6
1.0
 2.3
2.1


-0.6
 -0.7
 -0.6











39 ndrg1b N-myc downstream regulated 1b 393665 5.1 2.7
 2.6
2.4
 4.0
1.3
 1.6
0.2
 2.2
1.8
 1.3
0.4
 1.5
0.9
 2.8
2.1
 2.5
1.6
 3.5
0.7
 1.8
1.3
 2.1
0.8
 1.2
0.1
 0.8
0.6
 1.3
0.6
 0.5
0.4
 0.6
-0.3
 1.7
 1.9

40 kcnv2a potassium channel, subfamily V, member 2a 567267 5.0 2.7
 1.6
1.5
 1.7
-0.1
 0.2
 -0.5
 -0.5
 -0.1
 -0.4
 0.0
 0.3
 -0.1
 -0.9
 0.4
 0.8
 -0.4
 -0.6




41 egflam EGF like, fibronectin type III and laminin G domains 799405 5.0 2.6
 3.1
 3.4
 -0.4
 0.8
 -0.2
 0.3
 1.3
 0.7
 -0.6
 0.4
 0.8
 -0.0
 0.9

-0.6
 0.8
 -1.3

42 neurod4 neuronal differentiation 4 266958 5.0 2.6
 2.1
0.9
 4.6
4.4
 0.6
-1.1
 0.5
-0.6
 -0.2
-0.6
 1.0
0.9
 1.5
0.3
 0.5
-0.7
 0.8
0.2
 1.1
0.3
 0.8
0.4
 0.7
-0.2
 1.5
1.2
 0.9
-0.6
 0.6
0.3

0.5

43 grik1b glutamate receptor, ionotropic, kainate 1b 561540 5.0 2.6
 3.2
3.1
 1.8
0.3
 1.2
0.4
 1.1
0.0
 -0.5
-1.0
 0.8
0.6
 0.5
0.4
 0.3
-0.1
 1.0
-0.4
 0.7
0.3
 0.6
-0.1
 0.6
-0.2
 1.8
0.9
 1.1
0.2
 0.2
-0.3
1.6
1.2
 0.4
-0.2

44 pde6gb phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog b 554700 5.0 2.6
 1.3
1.2
 5.2
1.5
 1.0
0.4
 -0.3
-1.8
 0.1
-0.2
 0.7
 0.1
 0.3
 0.5
 0.5
 1.7
 0.4
 0.3
 1.1
-0.1
 0.3
-0.7




45 si:dkey-57a22.15 si:dkey-57a22.15 795575 4.9 2.6
 0.6
0.1
 1.2
0.6


0.1
-0.3
 0.1
0.1
 0.4
0.1










3.9
2.3
46 foxg1b forkhead box G1b 405850 4.9 2.6
 1.6
1.5
 4.4
3.0
 0.7
0.6
 1.5
0.5
 0.6
0.3
 0.7
0.3
 1.0
1.0
 0.6
0.5
 0.8
-0.1
 1.2
0.8
 1.3
1.0
 1.6
0.5
 0.7
0.6
 -0.3
-0.8
 0.9
-0.5
 1.5
0.9
 0.7
0.6
 2.4
1.5
 1.2
1.1
47 rorb RAR-related orphan receptor B 567943 4.9 2.6
 3.5
3.0
 4.0
3.5
 1.9
-0.2
 0.5
0.1
 0.2
-0.0
 0.5
0.3
 0.4
-0.9
 0.5
-0.1
 0.6
-1.3
 0.5
-0.4
 0.8
0.6
 1.1
0.9
 0.6
0.6
 1.5
-0.0
 1.0
-0.0
 -0.6
-1.0
-1.5
-0.1
48 pou4f2 POU class 4 homeobox 2 402816 4.9 2.6
 2.1
1.8
 2.9
2.2
 0.0
 0.4
 -0.9
 -0.2
 0.1
 -0.2
 0.2
 -0.2
 1.0
0.7
 0.5
0.1
 0.1
-0.5
 0.7
 1.4
0.2
 2.1
-0.1
-3.1
49 si:ch211-13f8.1 si:ch211-13f8.1 101882577 4.8 2.5
 2.4
2.1
 3.4
0.4
 -0.2
 0.5
 -0.8
 3.2
 1.4
 -0.5
 1.7
 2.2
 0.4
 0.6
 -0.5
 -0.7
 -0.1
 -2.7



50 syt18b synaptotagmin XVIIIb 100317018




















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