Orthologous genes in OrthoFinder**

Species Gene Description
 cfa-m.4   RHO   rhodopsin 
 hsa-u.4   RHO   rhodopsin 
 mmu-u.4   Rho   rhodopsin 
 rno-u.3   Rho   rhodopsin 
 mcc-u.3   RHO   rhodopsin 
 gga-u.3   RHO   rhodopsin 
 gga-u.3   OPN1MSW   opsin, green sensitive (rhodopsin-like) 
 dre-u.3   rhol   rhodopsin, like 
 dre-u.3   opn1mw3   opsin 1 (cone pigments), medium-wave-sensitive, 3 
 dre-u.3   opn1mw4   opsin 1 (cone pigments), medium-wave-sensitive, 4 

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Top 50 coexpressed genes to RHO (cfa-m.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 cfa260   Glycine, serine and threonine metabolism  1 38 -
 cfa310   Lysine degradation  1 60 -
 cfa4120   Ubiquitin mediated proteolysis  1 162 -
 cfa4080   Neuroactive ligand-receptor interaction  1 344 -
 cfa4740   Olfactory transduction  7 743 -

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cfa:RHO (rhodopsin) External Links;


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Show Coexpressed Genes
UMAP
Gene Function KEGG Entrez
Gene
ID		 Other ID LINK Target Reference

cfa-m.4
for
RHO
hsa-u.4
for
RHO
mmu-u.4
for
Rho
rno-u.3
for
Rho
mcc-u.3
for
RHO
gga-u.3
for
RHO
gga-u.3
for
OPN1MSW
dre-u.3
for
rhol
dre-u.3
for
opn1mw3
dre-u.3
for
opn1mw4
1 AQP8 aquaporin 8 608036 4.9 4.0
 -0.6
 -0.7
1.0
 0.2
 1.4
-0.1
 1.5
0.0
 2.2
0.9
2 TMEM235 transmembrane protein 235 491549 4.6








3 RTP1 receptor transporter protein 1 488120 4.3
3.3
1.4






4 SLC23A3 solute carrier family 23 (nucleobase transporters), member 3 488534 4.2








5 SHISA3 shisa family member 3 610468 4.1 -0.1
 -0.1
 -0.3
0.8
 -0.3
 0.0
 0.2
 0.4
6 LCN12 lipocalin 12 491242 4.1

1.2





7 SLC25A34 solute carrier family 25 member 34 608629 4.0
1.0
-0.2
 0.9
-0.1
 0.0
 -0.4
 -1.6
 -0.4
-0.5
 -0.4
-0.5
 -0.0
-1.4
8 GALR3 galanin receptor 3 610233 3.9

1.2


0.2
 -0.6
 0.8
9 OR2A37 olfactory receptor family 2 subfamily A member 37 491442 3.9








10 OR1F15 olfactory receptor family 1 subfamily F member 15 489852 3.8








11 LOXHD1 lipoxygenase homology PLAT domains 1 490467 3.8


0.9
-0.4
 0.8
-0.4
 0.6
0.0
 0.7
 -0.3
 -1.1
12 LOC476416 orphan sodium- and chloride-dependent neurotransmitter transporter NTT5-like 476416 3.8








13 ADAMTS16 ADAM metallopeptidase with thrombospondin type 1 motif 16 488061 3.8 0.7
0.9
 -0.5

0.3
 0.5
 0.9
14 OR8S9 olfactory receptor family 8 subfamily S member 9 486573 3.8








15 CELSR1 cadherin EGF LAG seven-pass G-type receptor 1 481203 3.7 0.4
0.2
 1.3
-0.3
 1.9
-0.6
 1.0
0.5
 0.8
0.4
 0.3
-0.5
 0.8
0.4
 1.1
-0.8
 0.9
-0.4
16 LGR6 leucine rich repeat containing G protein-coupled receptor 6 490231 3.7 -0.4
 0.1
 -0.9
 1.0
 -0.2
 0.6
 0.5
 0.3
 0.2
17 SLC29A2 solute carrier family 29 member 2 611913 3.7 0.2
-0.3
 0.4
-0.6
 -0.2
-0.2
 0.6
0.3
 0.4
-0.8
 0.6
0.4
 -0.1
-0.1
 0.4
-0.1
 0.2
-0.1
18 LOC608496 galanin receptor 1 pseudogene 608496 3.7








19 SARDH sarcosine dehydrogenase 491277 3.6 0.5
 -0.2
 -1.5
 -0.7
 0.5
 0.1
 -0.9
 -0.7
 -0.8
20 TMEM198 transmembrane protein 198 610690 3.6 0.5
 0.7
-0.1
 1.3
-0.7
 -0.7
 1.3
0.1
 0.6
-0.0
 1.3
-0.1
 -0.1
-0.2
 0.3
-0.4
21 PROK1 prokineticin 1 490113 3.6








22 RFX4 regulatory factor X4 474529 3.6 1.8
1.3
 1.0
0.5
 1.9
1.8
 1.2
0.8
 0.2
0.0
 1.3
-0.2
 -0.1
-0.2
 0.6
-0.4
 0.7
0.6
23 PLPPR2 phospholipid phosphatase related 2 484944 3.6 0.2
-0.5
 0.7
0.1
 0.2
0.2
 1.0
0.4
 1.8
1.1
 0.5
0.3
 2.6
0.4
 0.8
0.5
 0.8
-0.8
24 PRSS38 serine protease 38 475179 3.6








25 OR2D3D olfactory receptor family 2 subfamily D member 3D 485361 3.6








26 OR5L1 olfactory receptor family 5 subfamily L member 1 483556 3.5








27 SLC6A18 solute carrier family 6 member 18 478631 3.5 0.9
 3.0
1.2
 0.4
-0.1
 1.7
 -0.7
-0.8
 1.0
-0.1
 1.4
0.9
 -0.1
-0.2
 0.5
0.3
28 OR1M1B olfactory receptor family 1 subfamily M member 1B 484987 3.5








29 SYT12 synaptotagmin 12 483703 3.5 1.3
 -0.2
 0.1
 1.0
 -0.4
 0.3
 0.6
 0.6
 0.6
30 SYN3 synapsin III 481290 3.5 1.4
1.3
 1.0
-0.2
 0.8
0.6
 2.5
0.2
 0.5
0.3
 1.2
0.3
 0.8
0.1
 0.4
-0.3
 1.0
0.8
31 LOC476356 putative serine protease 47 476356 3.5


-0.2




32 OR2A5 olfactory receptor family 2 subfamily A member 5 403900 3.5








33 SBK3 SH3 domain binding kinase family member 3 611270 3.5
4.2






34 PAQR4 progestin and adipoQ receptor family member 4 490051 3.4 0.2
 -0.2
 -0.5
 -1.8

-0.0
 0.4
 -0.4
35 BIRC7 baculoviral IAP repeat containing 7 485969 3.4 0.9
-0.6
 -0.1
-0.4
 0.4
-0.6
 0.3
-0.9
 1.1
-0.8
 2.2
-0.7
 0.5
-0.1
 0.3
-1.0
 1.1
-0.1
36 GPR20 G protein-coupled receptor 20 482061 3.4



-0.1
 -0.8


37 SLC6A17 solute carrier family 6 member 17 490115 3.4 1.7
 1.1
 -0.1
 0.8
 -0.4
 0.2
 -0.0
 0.3
 0.5
38 STKLD1 serine/threonine kinase like domain containing 1 491270 3.4



0.2
 -1.2


39 TMEM255B transmembrane protein 255B 607739 3.4 -0.7
 0.8
 0.1
0.1
 -0.4
-1.5
 0.8
-1.0
 -0.6
-1.1
 -0.9
 -0.8
 -1.1
40 ZACN zinc activated ion channel 483326 3.4








41 OR2Z1 olfactory receptor family 2 subfamily Z member 1 485014 3.3








42 GJD2 gap junction protein delta 2 487477 3.3 3.4
 0.7
 1.3
 2.8
 0.4
 0.2
 3.3
0.3
 0.7
-0.5
 1.2
0.4
43 OR13E1 olfactory receptor family 13 subfamily E member 1 481600 3.3








44 MAP3K10 mitogen-activated protein kinase kinase kinase 10 484504 3.3 0.4
-0.0
 1.2
0.4
 2.7
0.4
 0.9
0.2
 -0.2
-0.2
 0.5
-0.4
 -0.1
-0.6
 -0.3
-0.5
 0.2
-0.3
45 TBX6 T-box transcription factor 6 489948 3.3
1.6

-0.1
 -0.8
 -0.1
 -1.6
 0.6
46 TMPRSS15 transmembrane serine protease 15 487700 3.3 0.7


-1.2
 0.9
 -0.3
 -1.3
 -1.2
47 LOC492195 melanoma-associated antigen 10-like 492195 3.3








48 ZP3 zona pellucida glycoprotein 3 403894 3.3 1.8
 0.3
-1.0
 0.6
-0.7
 1.3
0.1
 0.4
-0.1
 0.4
0.1
 2.1
0.7
49 DOT1L DOT1 like histone lysine methyltransferase 485073 3.3 -0.7
 0.5
 1.2
 1.4
 -0.7
 0.4
 -0.3
 -0.4
 0.1
50 TMEM169 transmembrane protein 169 610243 3.3 0.5
 1.0
 -0.7
1.4
 -0.4
 0.5
0.4
 -0.3
-0.5
 -0.8
-2.0
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