Orthologous genes in OrthoFinder**

Species Gene Description
 cfa-u.3   SF3B4   splicing factor 3b subunit 4 
 cfa-r.3   SF3B4   splicing factor 3b subunit 4 
 cfa-m.4   SF3B4   splicing factor 3b subunit 4 
 hsa-u.4   SF3B4   splicing factor 3b subunit 4 
 mmu-u.4   Sf3b4   splicing factor 3b, subunit 4 
 rno-u.3   Sf3b4   splicing factor 3b, subunit 4 
 mcc-u.3   SF3B4   splicing factor 3b subunit 4 
 gga-u.3   SF3B4   splicing factor 3b subunit 4 
 dre-u.3   sf3b4   splicing factor 3b, subunit 4 
 dme-u.3   Spx   Spliceosomal protein on the X 
 cel-u.3   sap-49   Splicing factor 3B subunit 4 
 sce-u.3   HSH49   U2 snRNP complex subunit HSH49 

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Top 50 coexpressed genes to SF3B4 (cfa-u.3 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 cfa3040   Spliceosome  9 126 6.80
 cfa3015   mRNA surveillance pathway  4 79 3.90
 cfa3013   Nucleocytoplasmic transport  2 120 -
 cfa4144   Endocytosis  2 245 -
 cfa5014   Amyotrophic lateral sclerosis  3 404 -

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cfa:SF3B4 (splicing factor 3b subunit 4) External Links;


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Show Coexpressed Genes
UMAP
Gene Function KEGG Entrez
Gene
ID		 Other ID LINK Target Reference

cfa-u.3
for
SF3B4
cfa-r.3
for
SF3B4
cfa-m.4
for
SF3B4
hsa-u.4
for
SF3B4
mmu-u.4
for
Sf3b4
rno-u.3
for
Sf3b4
mcc-u.3
for
SF3B4
gga-u.3
for
SF3B4
dre-u.3
for
sf3b4
dme-u.3
for
Spx
cel-u.3
for
sap-49
sce-u.3
for
HSH49
1 VPS72 vacuolar protein sorting 72 homolog 475843 9.5 5.2
 4.5
 6.9
 6.3
 7.7
 5.8
 3.4
 3.0
-0.0
 0.7
 4.1
2 PSMD4 proteasome 26S subunit ubiquitin receptor, non-ATPase 4 100192385 7.8 4.1
4.3
 1.3
 0.1
 -0.2
 0.6
 1.9
0.5
 0.0
 3.9
 -0.5
3 CERS2 ceramide synthase 2 483187 6.7 3.2
 3.9
 4.5
0.4
 2.6
0.3
 1.3
0.5
 1.3
1.2
 3.3
-0.8
 0.9
0.9
 0.5
 -0.5
-1.5
 -0.2
4 PPM1G protein phosphatase, Mg2+/Mn2+ dependent 1G 475703 6.1 3.3
 3.1
 3.5
 5.5
 4.4
 4.0
 2.7
 4.4
 1.9
 2.8
5 TAF6 TATA-box binding protein associated factor 6 119872150 6.0 3.2
4.3
 2.4
 4.2
 3.7
-0.7
 3.8
0.8
 3.9
2.1
 0.4
6 CHAMP1 chromosome alignment maintaining phosphoprotein 1 100688496 6.0 3.2
5.2
 3.9
 2.3
 4.1
 2.7



7 PCBP1 poly(rC) binding protein 1 481417 5.9 3.1
5.5
2.8
 8.2
3.7
 5.9
3.7
 4.3
2.3
 8.8
1.9
 2.8
0.3
 -1.3
 1.2
 -3.0
8 SF3A2 splicing factor 3a subunit 2 612188 5.9 4.1
 1.7
 8.0
 15.3
 13.6
 7.7
 11.5
 6.9
 5.3
 2.3
 1.8
9 APH1A aph-1 homolog A, gamma-secretase subunit 100855839 5.8 3.1
4.3
-0.6
 1.5
-0.8
 2.5
-0.1
 1.9
-1.3
 1.7
0.4
 1.6
0.3
 1.9
 1.5
10 FUS FUS RNA binding protein 100856381 5.6 3.0
3.6
0.7
 3.3
0.1
 5.1
0.9
 2.2
1.5
 5.7
2.6
 5.1
0.7


11 HNRNPA0 heterogeneous nuclear ribonucleoprotein A0 481524 5.6 2.9
 3.0
 3.5
 3.1
 2.0
 3.7
 3.4
 5.7
4.8


12 SCAF4 SR-related CTD associated factor 4 100687160 5.5 2.9
5.7
2.6
 2.9
2.0
 3.0
2.6
 5.9
1.7
 3.5
1.3
 2.9
2.1
 4.1
 6.8
13 POGZ pogo transposable element derived with ZNF domain 100856450 5.5 2.9
6.7
 1.9
 1.3
 1.3
 2.6
 2.0
-0.2
 3.0

14 USP39 ubiquitin specific peptidase 39 475767 5.4 3.6
 1.8
 2.3
 2.6
 0.9
 2.7
 5.0
 4.5
 5.4
 3.1
 1.6
15 ZNF207 zinc finger protein 207 119881612 5.3 2.8
3.4
 1.8
 4.0
 4.5
 1.9
 7.9
2.3
 3.9
 4.5
16 PI4KB phosphatidylinositol 4-kinase beta 483196 5.3 3.0
 2.5
 5.6
 0.6
 1.6
 1.5
 3.8
 3.2
 -0.6
 -0.9
 0.5
17 ZNF687 zinc finger protein 687 483195 5.3 3.5
 1.8
 7.2
2.9
 1.7
1.5
 2.6
1.5
 2.5
2.0
 5.0
1.4
 0.7
0.5
-0.6
-1.3
18 PTBP1 polypyrimidine tract binding protein 1 485097 5.2 3.3
 2.1
 5.0
0.5
 6.5
-0.6
 6.7
1.4
 4.1
-0.4
 1.7
-0.1
 2.1
2.0
 2.6
 0.1
19 RNPS1 RNA binding protein with serine rich domain 1 479880 5.2 2.6
 2.9
 6.5
 5.4
 6.1
 4.4
 2.9
 10.5
 6.1
0.7
 4.4
20 APEX1 apurinic/apyrimidinic endodeoxyribonuclease 1 482558 5.2 3.7
 1.5
 1.8
 3.4
 3.1
 4.3
 5.3
 3.8
 1.9
 1.7
21 HNRNPL heterogeneous nuclear ribonucleoprotein L 100855936 5.2 2.8
2.3
-0.4
 2.6
1.6
 4.5
1.2
 3.5
-0.1
 8.8
-0.1
 2.5
 -0.2
 0.9
22 SLC35A4 solute carrier family 35 member A4 487305 5.2 2.8
4.5
 5.1
 4.5
 5.7
0.1


23 PRR3 proline rich 3 481704 5.1 2.7
3.5
2.7
 1.5




24 CLPTM1 CLPTM1 regulator of GABA type A receptor forward trafficking 484455 5.1 2.3
 3.2
 4.1
 4.7
 2.9
 4.6
1.9
 -0.4
 2.2
0.2
25 E2F4 E2F transcription factor 4 611243 5.1 2.4
 3.0
 4.8
-0.2
 7.6
2.9
 5.0
2.4
 8.3
1.7
 2.3
1.1
 0.8
0.5
 1.6
 4.2
26 MCM7 minichromosome maintenance complex component 7 119872149 5.0 2.7
0.4
 2.6
 2.1
 1.7
 3.6
 4.1
 1.7
 3.4
 0.4
27 RAVER1 ribonucleoprotein, PTB binding 1 100683988 5.0 2.7
7.2
 7.4
 6.8
 5.5
 4.2
 0.9


28 SF3A1 splicing factor 3a subunit 1 477538 5.0 2.7
 2.5
 7.9
 5.9
 5.8
 6.7
 6.4
 5.4
 4.6
 4.4
 0.3
29 BAG6 BAG cochaperone 6 474842 4.9 2.9
 2.2
 3.9
 4.2
 3.7
 2.7
 3.0
 2.2
1.8
 2.2

30 PRRC2A proline rich coiled-coil 2A 481713 4.9 2.7
 2.4
 5.2
 5.8
 3.7
 4.5

3.1

31 POLR1A RNA polymerase I subunit A 475766 4.9 2.2
 3.0
 1.0
 1.5
 0.4
 2.7
 0.6
 0.5
 -2.1
 2.5
 -0.9
32 RBM42 RNA binding motif protein 42 612999 4.8 1.6
 3.8
 5.4
 6.6
 7.5
 7.0
4.1
 1.9
 2.2
33 PPP4C protein phosphatase 4 catalytic subunit 489947 4.8 2.8
 2.2
 4.5
2.4
 4.4
1.9
 3.9
2.9
 2.8
2.1
 4.3
2.3
 2.6
2.4
 4.6
3.2
 3.1
2.2
 0.6
0.3
34 U2AF2 U2 small nuclear RNA auxiliary factor 2 100687048 4.8 2.6
3.7
 7.9
 3.6
 3.9
4.0
2.5
 2.6
 4.2
35 RAB1B RAB1B, member RAS oncogene family 610762 4.8 1.8
 3.5
 4.0
-0.3
 4.2
1.8
 1.5
0.8
 2.4
0.2
 0.4
 1.4
1.0
 -1.0
 0.8
 -0.2
36 MAP1S microtubule associated protein 1S 100688192 4.8 2.6
5.0
0.3
 5.4
1.0
 2.5
0.8
 3.8
1.3
 1.9
-0.9
 1.1
0.4
 -0.4

37 USB1 U6 snRNA biogenesis phosphodiesterase 1 611141 4.8 2.2
 2.9
 4.4
 1.8
 1.4
 3.7
 -2.2
 -1.2
 -0.9

38 UBE2V1 ubiquitin conjugating enzyme E2 V1 100538347 4.7 2.5
-0.9
 4.4
1.3
 3.0
0.6
 4.2
1.2
 0.2
-0.6
 2.6
0.6
 1.9
 0.9
 -0.2
39 EFTUD2 elongation factor Tu GTP binding domain containing 2 490935 4.7 1.9
 3.3
 2.2
 4.5
 3.3
 1.5
 2.4
 5.4
 4.6
 4.6
40 DCLRE1B DNA cross-link repair 1B 606778 4.7 2.4
 2.6
 3.3
 1.4
3.6
 1.2
 0.4
0.4
0.3
41 ARHGDIA Rho GDP dissociation inhibitor alpha 475924 4.7 2.7
 2.2
 5.9
1.1
 6.3
0.1
 6.3
1.7
 6.2
2.1
 4.5
2.4
 2.9
-1.1
 1.6
 -1.3
 1.0
42 DPF2 double PHD fingers 2 483743 4.7 2.1
 2.9
 4.3
1.2
 4.6
0.4
 6.6
0.5
 5.2
-0.7
 5.3
0.9
 2.0
1.7
 2.8
2.2
 1.8
43 HGS hepatocyte growth factor-regulated tyrosine kinase substrate 483367 4.7 2.5
 2.4
 4.6
 6.2
 6.8
 4.7
 5.0
 1.1
 1.0
 1.0
 -0.5
44 CHERP calcium homeostasis endoplasmic reticulum protein 610237 4.6 3.1
 1.7
 7.5
 8.1
 7.4
 5.0
 4.1
 5.8
 1.1
 0.8
45 RBM8A RNA binding motif protein 8A 475827 4.6 3.0
 1.8
 5.0
 3.8
 3.5
 3.9
 2.7
 3.2
 2.1
1.5
 1.4
46 CPSF3 cleavage and polyadenylation specific factor 3 100856414 4.6 2.5
0.6
 0.5
 1.5
 1.8
 -0.6
 -0.1
 1.9
 1.9
 -0.9
47 TARS2 threonyl-tRNA synthetase 2, mitochondrial 608006 4.6 3.3
 1.3
 2.0
1.1
 1.0
-0.2
 1.4
-1.1
 0.1
-0.4
 3.0
-0.2
 1.2
-0.5
 1.2
 1.2
 -1.1
-1.4
48 COPS6 COP9 signalosome subunit 6 119872152 4.6 2.5
1.5
 1.1
 -0.2
 0.3
2.3
 5.2
 4.0
49 PFN1 profilin 1 607397 4.6 2.1
 2.8
 5.1
0.1
 4.0
-0.3
 4.5
0.2
 4.5
-0.7
 0.8
 0.8
0.1


50 RAB11B RAB11B, member RAS oncogene family 611619 4.5 2.4
 2.4
 4.2
0.1
 3.8
0.8
 5.8
0.8
 3.6
0.8
 1.1
0.8
 2.6
0.8
 2.5
 0.9
 0.4
0.1
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