Orthologous genes in OrthoFinder**

Species Gene Description
 cfa-u.3   POLR2A   RNA polymerase II subunit A 
 cfa-r.3   POLR2A   RNA polymerase II subunit A 
 cfa-m.4   POLR2A   RNA polymerase II subunit A 
 hsa-u.4   POLR2A   RNA polymerase II subunit A 
 mmu-u.4   Polr2a   polymerase (RNA) II (DNA directed) polypeptide A 
 rno-u.3   Polr2a   RNA polymerase II subunit A 
 mcc-u.3   POLR2A   RNA polymerase II subunit A 
 gga-u.3   107056305   DNA-directed RNA polymerase II subunit RPB1-like 
 dre-u.3   polr2a   RNA polymerase II subunit A 
 dme-u.3   RpII215   RNA polymerase II 215kD subunit 
 cel-u.3   ama-1   DNA-directed RNA polymerase II subunit RPB1 
 sce-u.3   RPO21   DNA-directed RNA polymerase II core subunit RPO21 
 spo-u.3   SPAC12B10.09   putative S-adenosylmethionine transporter 

close


Top 50 coexpressed genes to POLR2A (cfa-u.3 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 cfa310   Lysine degradation  3 57 3.08
 cfa3040   Spliceosome  3 127 2.09
 cfa5164   Influenza A  3 131 2.05
 cfa5165   Human papillomavirus infection  3 329 -
 cfa5016   Huntington disease  3 341 -

close


cfa:POLR2A (RNA polymerase II subunit A) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
UMAP
Gene Function KEGG Entrez
Gene
ID		 Other ID LINK Target Reference

cfa-u.3
for
POLR2A
cfa-r.3
for
POLR2A
cfa-m.4
for
POLR2A
hsa-u.4
for
POLR2A
mmu-u.4
for
Polr2a
rno-u.3
for
Polr2a
mcc-u.3
for
POLR2A
gga-u.3
for
107056305
dre-u.3
for
polr2a
dme-u.3
for
RpII215
cel-u.3
for
ama-1
sce-u.3
for
RPO21
spo-u.3
for
SPAC12B10.09
1 EP300 E1A binding protein p300 100684945 10.0 5.3
9.0
8.2
 7.9
5.0
 8.0
3.2
 4.3
3.0
 7.2
6.0
 4.9
4.0
 4.9
 5.0
-1.8
2 KMT2D lysine methyltransferase 2D 486558 7.9 4.4
 3.8
 9.6
 6.8
 5.4
 3.2
 9.4
 5.2



3 CREBBP CREB binding protein 479866 7.6 4.6
 3.2
 9.0
8.2
 7.9
5.0
 8.0
3.2
 4.3
3.0
 7.2
6.0
 4.9
4.0
 4.9
 5.0
-1.8
4 SP2 Sp2 transcription factor 100687491 7.6 4.0
6.5
 8.9
 6.0
 3.8
 7.4
 0.5



5 KMT2B lysine methyltransferase 2B 100688666 7.4 3.9
5.7
 6.1
 6.3
 2.0
3.3
2.9
 3.4


6 UBR4 ubiquitin protein ligase E3 component n-recognin 4 478211 7.1 4.8
 2.3
 7.6
 6.9
 4.3
 1.6
 2.1
 5.5
 3.7
 3.3

7 YLPM1 YLP motif containing 1 480387 7.0 4.7
 2.4
 8.0
 6.2
 6.2
 3.2
 5.2
 4.8
 2.7


8 ARID1A AT-rich interaction domain 1A 487352 6.7 4.3
 2.5
 9.4
3.6
 9.3
3.2
 6.2
0.6
 3.8
3.0
 4.4
3.0
 9.6
6.0
 5.2
 4.6

9 PTPN23 protein tyrosine phosphatase non-receptor type 23 609220 6.6 4.6
 1.9
 7.8
 6.8
 4.4
 3.8
 6.8
 5.0
1.1
 3.8
 8.6
1.1
10 LOC479773 Snf2 related CREBBP activator protein 479773 6.4 5.1
 1.2
 13.0
 9.0
 6.1
 5.9
7.4
 7.4
5.1
11 TLN1 talin 1 100856393 6.4 3.4
4.6
0.9
 2.9
0.8
 3.6
1.2
 1.4
0.1
 4.2
0.3
 1.8
1.6
 2.6


12 SUPT6H SPT6 homolog, histone chaperone and transcription elongation factor 480627 6.3 3.0
 3.6
 8.0
 7.6
 6.0
 5.5
 3.0
 5.9
 6.3
 4.4
 2.1
13 SPEN spen family transcriptional repressor 100687765 6.2 3.3
6.4
 7.0
 7.4
 2.7
 4.6
 4.9
1.3
 3.9


14 RAVER1 ribonucleoprotein, PTB binding 1 100683988 6.2 3.3
5.4
 7.4
 5.1
 3.7
 4.6
 2.0



15 BRD4 bromodomain containing 4 484869 6.1 3.9
 2.3
 7.6
6.2
 7.1
5.7
 5.7
3.9
 4.5
3.4
 8.4
7.1
 6.2
6.0
 5.5
0.0
 3.9
-0.1
 1.2
0.1
 0.1
16 U2AF2 U2 small nuclear RNA auxiliary factor 2 100687048 6.0 3.2
3.7
 4.0
 2.2
 0.7
1.6
0.3
 1.4
 3.2

17 EDC4 enhancer of mRNA decapping 4 489751 6.0 4.4
 1.6
 4.6
 3.5
 2.1
 2.2
 3.2
 4.7
 6.3
 4.6

18 PELP1 proline, glutamate and leucine rich protein 1 479475 5.8 2.9
 3.3
 7.0
 4.9
 2.4
 4.4
2.6
 1.7


19 KMT2A lysine methyltransferase 2A 479417 5.8 2.6
 3.6
 5.1
 4.9
 4.5
 0.4
 0.9
 2.0



20 ATXN2L ataxin 2 like 489951 5.7 3.5
 2.3
 6.9
3.8
 7.7
2.9
 5.0
4.3
 4.8
2.6
 8.1
3.9
 4.5
2.1
 3.0
 5.9
 1.4
 -0.1
21 ADAR adenosine deaminase RNA specific 100855668 5.6 3.0
4.1
 1.2
 0.8
 4.5
 2.3
 5.0



22 HCFC1 host cell factor C1 492246 5.6 5.2
 -0.0
 8.6
 8.3
 7.5
 7.4
7.4
3.4



23 WIPF2 WAS/WASL interacting protein family member 2 608186 5.5 3.4
 2.3
 5.1
 4.2
 4.2
 4.0
 6.1
 3.3
1.9



24 NELFA negative elongation factor complex member A 488806 5.4 2.7
 3.0
 2.0
 1.6
 3.6
 2.2
 1.1
 1.3
 4.4


25 FAM193A family with sequence similarity 193 member A 610546 5.4 3.4
 2.1
 4.9
 5.3
 4.2
 2.3
 1.5
 2.6



26 SON SON DNA and RNA binding protein 100856585 5.3 2.8
5.9
 4.0
 3.2
 2.0
 0.5
 -1.1
 0.2
 2.1

27 EP400 E1A binding protein p400 486227 5.2 4.1
 0.9
 8.1
 7.7
 6.7
 2.0
 4.5
 7.5



28 RIPOR1 RHO family interacting cell polarization regulator 1 489757 5.1 3.8
 1.2
 4.1
0.5
 3.4
-0.8
 1.0
0.6
 1.1
0.2
 1.2
0.0
 0.2
-0.4
-1.1

29 TOB2 transducer of ERBB2, 2 481233 5.1 2.7
2.9
2.1
 2.8
0.3
 2.2
2.0
 1.5
0.1
 1.7
0.0
 0.6
0.4
 0.2


30 SCAF4 SR-related CTD associated factor 4 100687160 5.1 2.7
6.2
4.5
 5.1
3.6
 6.4
4.1
 3.3
2.8
 5.0
2.7
 4.9
2.2
 4.8
 6.0
0.6
31 PRRC2A proline rich coiled-coil 2A 481713 5.0 3.8
 1.1
 7.8
 9.2
 5.1
 3.6

5.8


32 PHF23 PHD finger protein 23 489465 5.0 2.1
 3.3
 2.9
 0.9
 1.2
 0.5





33 SNRNP200 small nuclear ribonucleoprotein U5 subunit 200 475742 5.0 3.4
 1.6
 7.3
1.4
 5.9
0.0
 4.2
-1.1
 4.4
 4.7
-0.2
 3.6
3.0
 6.0
4.6
 13.3
4.7
 4.3
3.2
 -1.4
34 HTT huntingtin 479074 5.0 3.2
 1.8
 5.3
 1.6
 2.8
 1.3
 -0.1
 4.6
 1.0


35 DROSHA drosha ribonuclease III 119871576 4.9 2.6
2.4
 4.9
 3.0
 2.5
 1.2
 2.7
 3.4
 1.6
 -1.8
 -1.6
36 SF1 splicing factor 1 476031 4.9 2.5
 2.7
 6.2
 6.6
 4.3
 4.9
4.3
 3.1
 2.3
 4.7
37 SCAF1 SR-related CTD associated factor 1 484376 4.9 3.6
 1.3
 4.4
 5.5
 2.7
 2.7
5.3



38 PRR12 proline rich 12 484377 4.9 3.3
 1.6
 4.7
 8.5
 5.9
 1.5
6.0
2.8



39 SF3A1 splicing factor 3a subunit 1 477538 4.9 3.9
 0.8
 10.1
 5.2
 3.5
 6.5
 3.4
 2.3
 2.0
 4.8
 0.3
 1.1
40 CCNK cyclin K 612481 4.9 3.3
 1.5
 7.3
 7.2
 6.9
 3.8
 6.1
 4.5
 1.2
 -0.6
1.2
41 BICRA BRD4 interacting chromatin remodeling complex associated protein 612119 4.8 2.6
3.4
 4.1
 6.2
 1.7
 7.1
 3.8
-0.4
 2.4


42 DYNC1H1 dynein cytoplasmic 1 heavy chain 1 480437 4.8 3.3
 1.5
 5.9
 5.4
 4.7
 2.5
 1.0
 2.0
 1.9
 8.0
 2.2
 0.2
43 NUMA1 nuclear mitotic apparatus protein 1 485213 4.8 2.6
4.1
 4.9
 3.6
 4.2
 5.7
 1.2



44 PPRC1 PPARG related coactivator 1 477805 4.8 2.9
 2.0
 3.6
 2.9
 2.4
 1.8
 4.2
 1.3



45 KAT6A lysine acetyltransferase 6A 100683464 4.7 2.5
3.7
 5.3
 2.9
 3.0
 0.9
 5.9



46 MCM3AP minichromosome maintenance complex component 3 associated protein 480810 4.7 2.9
 1.9
 3.8
 5.0
 3.9
 1.3
 0.1
 4.6
2.0
 2.4
47 RREB1 ras responsive element binding protein 1 488206 4.7 3.0
 1.8
 2.6
 1.9
 1.4
 2.7
 -0.4
 2.6
1.5



48 UPF1 UPF1 RNA helicase and ATPase 476664 4.6 2.9
 1.8
 5.9
 3.6
 2.9
 6.2
 2.3
 2.8
 4.3
 4.7
 1.6
 1.3
49 INTS1 integrator complex subunit 1 100685475 4.6 2.5
3.4
 3.7
 1.3
 2.8
 2.0
 3.2
 3.2
 2.2

50 HUWE1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 480931 4.6 2.2
 2.7
 8.4
 5.7
3.5
 10.9
 8.7
 5.1
 9.9
 5.4
 -1.4
The preparation time of this page was 0.5 [sec].