Orthologous genes in OrthoFinder**

Species Gene Description
 cfa-u.3   XRN1   5'-3' exoribonuclease 1 
 cfa-r.3   XRN1   5'-3' exoribonuclease 1 
 cfa-m.4   XRN1   5'-3' exoribonuclease 1 
 hsa-u.4   XRN1   5'-3' exoribonuclease 1 
 mmu-u.4   Xrn1   5'-3' exoribonuclease 1 
 rno-u.3   Xrn1   5'-3' exoribonuclease 1 
 mcc-u.3   XRN1   5'-3' exoribonuclease 1 
 gga-u.3   XRN1   5'-3' exoribonuclease 1 
 dre-u.3   xrn1   5'-3' exoribonuclease 1 
 dme-u.3   pcm   pacman 
 cel-u.3   xrn-1   5'-3' exoribonuclease 1 
 sce-u.3   XRN1   chromatin-binding exonuclease XRN1 

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Top 50 coexpressed genes to XRN1 (cfa-u.3 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 cfa3040   Spliceosome  3 127 2.09
 cfa1524   Platinum drug resistance  1 74 -
 cfa3018   RNA degradation  1 83 -
 cfa3013   Nucleocytoplasmic transport  1 120 -
 cfa4621   NOD-like receptor signaling pathway  2 159 -

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cfa:XRN1 (5'-3' exoribonuclease 1) External Links;


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Show Coexpressed Genes
UMAP
Gene Function KEGG Entrez
Gene
ID		 Other ID LINK Target Reference

cfa-u.3
for
XRN1
cfa-r.3
for
XRN1
cfa-m.4
for
XRN1
hsa-u.4
for
XRN1
mmu-u.4
for
Xrn1
rno-u.3
for
Xrn1
mcc-u.3
for
XRN1
gga-u.3
for
XRN1
dre-u.3
for
xrn1
dme-u.3
for
pcm
cel-u.3
for
xrn-1
sce-u.3
for
XRN1
1 PHIP pleckstrin homology domain interacting protein 474976 9.4 4.9
7.7
6.0
 7.6
4.8
 8.1
4.8
 5.0
4.1
 6.9
5.8
 4.0
0.2
 6.4

2 BDP1 B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB 478090 8.7 4.5
 4.7
 4.6
 1.8
 6.2
 2.7
 2.1
 1.5
-0.0
 2.0
 0.8
 -0.0
3 TET2 tet methylcytosine dioxygenase 2 478499 8.2 4.5
 4.0
 5.8
 0.5
 2.4
 3.6
 2.1
 1.9
 0.7

4 ATRX ATRX chromatin remodeler 480963 8.2 4.2
 4.3
 5.3
 5.0
 6.3
 3.0
 3.2
 0.4
 2.2
 1.5
5 RC3H2 ring finger and CCCH-type domains 2 491344 8.2 3.5
 5.2
 5.5
2.9
 3.1
1.0
 3.6
3.4
 3.3
1.9
 3.8
2.2
 1.7
0.9
 1.2
 3.0
6 RIF1 replication timing regulatory factor 1 609234 8.0 4.3
5.6
 2.0
 4.9
 3.4
 1.9
 2.6
 2.1

7 KDM5A lysine demethylase 5A 477727 7.8 4.1
 4.1
 6.2
1.6
 8.9
2.0
 6.1
1.3
 2.8
0.6
 2.1
1.5
 2.8
2.3
 2.0
 1.1
 3.9
-0.3
8 SCAF11 SR-related CTD associated factor 11 477634 7.4 4.0
 3.6
 6.0
 3.2
 2.1
 3.6
 3.4



9 RAPGEF6 Rap guanine nucleotide exchange factor 6 609521 7.4 4.5
 3.1
 6.2
2.7
 5.8
0.8
 5.9
-0.1
 3.2
3.2
 2.2
1.2
 2.3
-0.1
 2.3

10 ATP7A ATPase copper transporting alpha 406185 7.3 4.6
 2.7
 2.3
0.7
 1.1
0.1
 3.5
0.5
 1.1
-0.6
 3.4
-0.7
 1.8
-0.5
 3.0
 1.5
 -0.3
11 ZBED6 zinc finger BED-type containing 6 100682640 7.2 3.8
6.7
 8.5
 8.0
 3.1




12 PAN3 poly(A) specific ribonuclease subunit PAN3 486024 7.1 3.1
 4.5
 2.7
 2.3
 0.6
 2.5
 4.0
 5.7
 0.5
 1.9
 1.1
13 CEP85L centrosomal protein 85 like 100687154 7.0 3.7
1.4
 2.1
 3.2
 3.1
 2.2
 0.7


14 CCDC186 coiled-coil domain containing 186 477825 6.5 4.4
 2.2
 6.0
 2.7
 2.3
 4.3
 2.2
 0.6
 0.2
 0.1
15 PHC3 polyhomeotic homolog 3 488158 6.5 4.4
 2.0
 9.3
 3.5
 5.9
 4.1
 1.1
 0.3


16 ARID4B AT-rich interaction domain 4B 488959 6.3 3.2
 3.4
 5.4
3.4
 3.6
3.5
 3.2
0.8
 4.1
2.6
 3.9
2.2
 0.4
 6.6
 4.3
17 ANKRD12 ankyrin repeat domain 12 480205 6.3 2.7
 4.1
 5.0
 3.1
 3.5
 4.3
 1.9
 -1.4
 -0.6

18 SON SON DNA and RNA binding protein 100856585 6.3 3.3
4.0
 3.2
 3.4
 2.7
 3.7
 -0.2
 2.5
 2.3
19 PBRM1 polybromo 1 476593 6.2 3.1
 3.5
 5.1
 4.8
 3.6
 2.7
 1.7
 3.5
-0.8
 2.1
 2.0
 2.6
1.4
20 HELZ helicase with zinc finger 490907 6.2 2.4
 4.4
 7.9
 2.6
 2.9
 4.9
 5.9
 1.5
 2.6

21 PKN2 protein kinase N2 490174 6.2 1.6
 5.4
 3.6
-0.1
 2.6
0.5
 2.7
-0.3
 6.1
0.8
 2.7
-0.6
 1.5
1.4
 -0.1
 2.7
22 THOC2 THO complex 2 481042 6.1 2.7
 3.9
 4.5
 8.3
2.3
 6.7
2.7
 3.3
 4.6
 1.5
 4.7
 2.0
 4.6
23 ZFX zinc finger protein X-linked 119868408 6.1 3.3
2.3
0.6
 5.2
0.1
 2.7
0.4
 2.4
0.5
 4.5
2.0
 1.7
1.5
 2.8
2.7
 -0.7
 1.8
0.5
24 MED13 mediator complex subunit 13 480582 6.1 4.7
 1.2
 7.0
3.5
 3.8
1.8
 4.2
0.0
 5.9
3.2
 2.7
1.8
 3.7
3.7
 2.0
 3.1
25 TRIP11 thyroid hormone receptor interactor 11 480228 6.0 4.8
 1.0
 4.6
 4.2
 6.0
 2.9
 3.1
 4.0
 2.3
 4.7
26 LYST lysosomal trafficking regulator 479195 6.0 3.0
 3.3
3.4
 3.8
 4.7
 2.3
 0.5
 2.0

27 MBTD1 mbt domain containing 1 491087 5.9 2.0
 4.6
 3.6
-0.5
 1.8
-0.7
 0.4
0.2
 2.3
-0.7
 3.1
-0.8
 3.3
0.9
 3.0
 0.8
-0.1
28 MGA MAX dimerization protein MGA 478266 5.9 3.4
 2.7
5.9
 4.3
 2.7
 4.0
 0.8
0.4
-0.3
29 PRRC2C proline rich coiled-coil 2C 480075 5.9 2.9
 3.4
 3.2
 8.0
 0.5
 2.2
4.4


30 U2SURP U2 snRNP associated SURP domain containing 477103 5.8 2.3
 4.1
 3.6
 2.1
 3.8
 2.9
 4.0
 -0.4
-1.2
 1.8
 1.3
31 CEP350 centrosomal protein 350 480028 5.8 4.1
 1.7
 6.1
 5.1
 3.6
 4.4
 3.1
 4.4


32 VPS13B vacuolar protein sorting 13 homolog B 481981 5.8 4.4
 1.3
 8.6
 4.7
 4.7
 2.8
 4.3
 0.8
 1.8

33 MINDY2 MINDY lysine 48 deubiquitinase 2 487577 5.8 3.0
 3.1
 3.2
0.7
 2.6
-0.7
 2.3
-0.1
 0.5
-1.3
 0.7
0.6
 1.4
-1.1
-0.7
 -0.7
-1.9
34 BCLAF1 BCL2 associated transcription factor 1 483999 5.8 3.1
 2.9
 2.0
 3.1
 4.6
 1.0
 1.8



35 ITSN2 intersectin 2 475683 5.8 2.7
 3.5
 4.2
0.8
 3.5
0.1
 3.5
0.9
 3.4
1.0
 2.6
0.7
 2.2
1.5
 2.2
 2.6
36 HOOK3 hook microtubule tethering protein 3 475567 5.7 4.2
 1.4
 2.7
1.4
 5.2
1.1
 3.1
2.0
 6.6
-0.8
 2.8
-0.2
 1.6
0.9
 -0.2
 2.5
37 ACAP2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 488039 5.7 3.7
 2.1
 7.4
0.4
 1.2
-0.4
 2.3
0.2
 2.5
-0.4
 0.8
0.4
 2.7
1.7
 1.2
 3.1
 -0.1
38 LOC119873308 uncharacterized LOC119873308 119873308 5.7 3.0









39 N4BP2 NEDD4 binding protein 2 479101 5.6 3.3
 2.5
 3.8
 3.4
 4.1
 0.8
 4.7
-0.0
 2.6
1.8
 2.4
0.5
40 LMBRD2 LMBR1 domain containing 2 489229 5.6 5.2
 -0.1
 5.3
 5.8
 4.9
 2.4
 1.6
 0.5
-2.0
-0.6
41 SETX senataxin 480691 5.6 2.9
 3.0
 5.6
 1.6
 8.5
 5.4
 4.4
 2.0

3.6
42 CHD6 chromodomain helicase DNA binding protein 6 477230 5.6 3.2
 2.6
 3.9
2.6
 3.4
3.3
 7.6
3.4
 3.8
2.9
 5.2
2.4
 5.8
3.0
 3.4
 4.7
43 STRN3 striatin 3 480282 5.5 2.0
 4.1
 3.7
1.8
 1.4
0.1
 2.6
0.4
 3.1
1.6
 3.0
2.1
 2.5
1.8
 2.8
 0.7
 0.8
44 TNRC6B trinucleotide repeat containing adaptor 6B 481240 5.5 2.5
 3.4
 3.1
 3.8
 2.9
 3.2
 3.9
 3.3
3.0


45 SF3B1 splicing factor 3b subunit 1 488456 5.5 3.7
 1.8
 4.4
 4.0
 4.7
 2.6
 3.9
3.4
 3.2
 0.4
46 KIAA1109 KIAA1109 483843 5.5 2.5
 3.4
 8.8
 7.0
 3.0
 7.0
 4.4
 3.8
 1.4
 4.7
 4.1
47 TAB3 TGF-beta activated kinase 1 (MAP3K7) binding protein 3 491807 5.4 2.9
 2.9
 3.4
 0.9
 4.7
 0.8
 0.5
 1.4


48 PPP4R3B protein phosphatase 4 regulatory subunit 3B 474603 5.4 2.6
 3.3
 2.6
-0.4
 4.6
0.2
 4.3
2.3
 3.3
1.9
 3.0
1.1
 4.8
0.7
 1.6
 3.3
 1.9
49 FMR1 FMRP translational regulator 1 481070 5.4 2.1
 3.9
 3.3
2.9
 1.5
0.4
 2.1
1.9
 4.5
1.6
 4.0
3.0
 1.6
1.5
 2.9
 -0.0
50 DMXL1 Dmx like 1 474631 5.4 3.1
 2.5
 5.5
5.4
 1.7
-0.1
 5.8
2.0
 2.9
2.8
 3.2
2.0
 2.0
1.5
 3.4
 3.8
 2.5
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