Orthologous genes in OrthoFinder**

Species Gene Description
 cfa-u.3   PDCD2   programmed cell death 2 
 cfa-r.3   PDCD2   programmed cell death 2 
 cfa-m.4   PDCD2   programmed cell death 2 
 hsa-u.4   PDCD2   programmed cell death 2 
 mmu-u.4   Pdcd2   programmed cell death 2 
 rno-u.3   Pdcd2   programmed cell death 2 
 mcc-u.3   PDCD2   programmed cell death 2 
 gga-u.3   PDCD2   programmed cell death 2 
 dre-u.3   pdcd2   programmed cell death 2 
 dme-u.3   Zfrp8   Zinc finger protein RP-8 
 cel-u.3   pdcd-2   MYND-type domain-containing protein 
 sce-u.3   TSR4   Tsr4p 
 spo-u.3   SPBC23E6.02   putative ATP-dependent DNA helicase 
 spo-u.3   rad8   ubiquitin-protein ligase E3 Rad8 
 spo-u.3   rhp16   ATP-dependent helicase 

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Top 50 coexpressed genes to PDCD2 (cfa-u.3 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 cfa5016   Huntington disease  10 254 6.95
 cfa5022   Pathways of neurodegeneration - multiple diseases  10 398 6.31
 cfa5012   Parkinson disease  9 227 6.20
 cfa5014   Amyotrophic lateral sclerosis  8 300 5.30
 cfa5010   Alzheimer disease  8 326 5.03

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cfa:PDCD2 (programmed cell death 2) External Links;


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Show Coexpressed Genes
UMAP
Gene Function KEGG Entrez
Gene
ID		 Other ID LINK Target Reference

cfa-u.3
for
PDCD2
cfa-r.3
for
PDCD2
cfa-m.4
for
PDCD2
hsa-u.4
for
PDCD2
mmu-u.4
for
Pdcd2
rno-u.3
for
Pdcd2
mcc-u.3
for
PDCD2
gga-u.3
for
PDCD2
dre-u.3
for
pdcd2
dme-u.3
for
Zfrp8
cel-u.3
for
pdcd-2
sce-u.3
for
TSR4
spo-u.3
for
SPBC23E6.02
spo-u.3
for
rad8
spo-u.3
for
rhp16
1 ATG5 autophagy related 5 610868 8.6 4.4
 4.6
 3.8
 2.6
 3.6
 1.9
 -0.4
 1.0
 -1.3
 0.5
 1.2
 -1.2
 -0.5
 -0.4
2 C12H6orf120 chromosome 12 C6orf120 homolog 102155644 8.0 4.2
4.5
 1.6
 0.4
 1.5
 1.8
 2.1





3 PSMB1 proteasome 20S subunit beta 1 475040 7.6 3.8
 4.3
 5.2
 4.0
 3.6
 1.7
 2.6
 0.6
 -1.1
 0.7
 -1.1
 -0.5
 1.5
 -0.0
4 SDHAF4 succinate dehydrogenase complex assembly factor 4 610894 6.3 2.6
 4.3
 2.2
 -0.4
 -0.4
 1.7
 1.3
 0.4
 0.2
-0.4
 0.8
 0.6


5 TBP TATA-box binding protein 611193 5.3 2.3
 3.5
 5.3
 1.4
 2.6
 -0.5
 4.4
 2.6
1.4
 3.5
0.3
 1.5
 -0.2


6 GRSF1 G-rich RNA sequence binding factor 1 475170 5.2 2.5
 3.0
 2.4
 2.6
 -1.2
 3.0
 3.1
 2.4





7 LMBRD1 LMBR1 domain containing 1 100856550 5.0 2.7
0.4
 0.7
 1.6
 -1.7
 0.9
 -1.1





8 MAP3K7 mitogen-activated protein kinase kinase kinase 7 102156745 4.9 2.6
4.4
 -1.2
 -1.0
 1.4
 1.0
 -0.2
 0.4
-0.4
 -0.1
-0.2



9 RNF7 ring finger protein 7 106557459 4.8 2.6
2.6
 0.6
 2.5
 1.7
 0.2
 1.3
 -1.0
 -0.0



10 SNX3 sorting nexin 3 613007 4.7 2.6
 2.4
 2.9
-0.6
 0.7
0.1
 -0.2
-0.4
 0.6
0.3
 1.3
0.2
 0.9
0.4
 -0.8
 0.5
 -0.3


11 CYB5R4 cytochrome b5 reductase 4 474982 4.6 2.1
 2.9
 2.3
 0.5
 1.6
 0.2
 1.3
 1.6
 2.0
 0.3
-1.2
 0.3
 -0.5
 0.5
 -0.2
12 MLYCD malonyl-CoA decarboxylase 489688 4.5 2.1
 2.7
 0.9
 2.7
 -0.1
 0.3
 2.1
 -0.4
0.2



13 TP53RK TP53 regulating kinase 611235 4.5 2.5
 2.2
 2.5
 3.3
1.5
 4.8
4.5
 1.2
 2.7
 3.7
 3.9
 4.8
 3.8


14 REXO4 REX4 homolog, 3'-5' exonuclease 491271 4.5 3.0
 1.5
 1.4
 0.5
 0.6
 1.3
 4.4
 3.5
 4.5
 1.6
 2.8
 1.5
 1.4
 1.0
15 PSMC4 proteasome 26S subunit, ATPase 4 100855613 4.4 2.4
-0.2
 -0.4
 1.0
 -0.1
 1.4
 3.7
 0.9
-0.1
 1.0
 0.1
 -1.2
 0.3
 -0.5
16 HDAC2 histone deacetylase 2 475035 4.4 2.7
 1.9
 4.0
3.5
 0.7
-0.8
 0.6
0.5
 1.7
0.5
 0.5
0.1
 2.3
-0.5
 -1.3
 0.0
-0.1
 -0.3
-1.3


17 ATIC 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase 488513 4.4 2.2
 2.4
 3.9
 2.1
 0.8
 2.2
 0.2
 -0.6
 -0.1
 -0.6
 0.3
-0.2


18 FIG4 FIG4 phosphoinositide 5-phosphatase 475023 4.4 2.1
 2.6
 2.0
 1.1
 -0.9
 -0.5
 -0.1
 -1.1
 1.0
 -0.9
 0.2
 0.3
 -0.7
 0.1
19 NDUFAF4 NADH:ubiquinone oxidoreductase complex assembly factor 4 475001 4.4 2.1
 2.6
 4.1
 1.2
 1.1
 1.4
 2.9
 3.6
 1.2




20 MTRES1 mitochondrial transcription rescue factor 1 100687319 4.3 2.3
1.8
 2.0
 0.5
 2.3
 1.8
 -0.0





21 LOC119881520 phosphoglycolate phosphatase 119881520 4.3 2.3
1.5
0.9
 1.3
1.3
 0.7
-1.2
 1.3
 2.3
1.0
 0.2
-0.2
 0.2
0.1
 -0.7
-1.1
 1.5


22 HNRNPAB heterogeneous nuclear ribonucleoprotein A/B 403666 4.2 2.3
1.6
0.7
 2.1
0.0
 1.6
1.1
 2.7
1.7
 1.6
1.2
 1.1
0.2
 0.4
 -0.1



23 QRSL1 glutaminyl-tRNA amidotransferase subunit QRSL1 475014 4.2 1.8
 2.8
 5.5
 0.5
 0.6
 1.2
 2.5
 3.1
 -0.4
 1.2
 0.2


24 VDAC2 voltage dependent anion channel 2 479255 4.2 1.7
 2.8
 1.8
0.9
 1.3
0.2
 -0.3
-0.9
 3.6
2.3
 0.2
-0.6
 0.5
0.2
 0.6
-1.0
 -2.0
 0.9
-1.0


25 NFKBIL1 NFKB inhibitor like 1 481711 4.2 0.8
 4.0
 0.6
 3.7
 5.0
 1.4
-0.6





26 FH fumarate hydratase 480092 4.1 1.9
 2.6
 0.0
 1.4
 -1.2
 1.2
 0.4
 -0.2
-0.6
 1.1
0.4
 -1.3
 0.8


27 UBE3D ubiquitin protein ligase E3D 481900 4.1 1.8
 2.6
 4.4
 3.1
0.5
 3.9
 2.4





28 RDH14 retinol dehydrogenase 14 100856223 4.1 2.2
4.0
1.6
 2.9
2.3
 1.8
1.6
 4.5
1.7
 2.1
1.1
 2.4
1.9
 1.0
0.6
 1.3
1.2
 0.9


29 PSMD6 proteasome 26S subunit, non-ATPase 6 484700 4.1 2.1
 2.2
 1.5
 1.7
 1.6
 1.6
 4.4
 3.4
 1.6
 0.5
 0.9


30 PSMA4 proteasome 20S subunit alpha 4 119874448 4.1 2.2
-0.2
 1.6
 1.7
 1.2
 2.6
 0.7
 0.4
-1.0
 1.2
 -0.1
 1.8
1.5
 1.6
-0.6
 1.0
-0.1
31 LIPT2 lipoyl(octanoyl) transferase 2 485196 4.1 2.2
 2.0
 0.7
 3.1
 2.8
4.0
 1.9
 0.0
 2.2
 -0.4
 0.3
 0.8
 -0.2
32 NDUFV2 NADH:ubiquinone oxidoreductase core subunit V2 480204 4.0 2.3
 1.9
 2.3
 1.5
 0.0
 0.8
 0.7
 0.6
 1.2
0.2
 0.3
0.2
 1.2
 -0.1
33 NDUFB4 NADH:ubiquinone oxidoreductase subunit B4 478577 3.9 1.9
 2.3
 1.2
 -1.4
 1.1
-1.5
 1.6
 0.8
 0.7
-0.5



34 RPF2 ribosome production factor 2 homolog 475029 3.9 1.6
 2.7
 3.0
 3.6
 4.0
 -0.6
 0.9
 3.1
 3.3
 3.5
 2.6
 -0.4
 -0.5
 0.3
35 KIF5B kinesin family member 5B 100855651 3.9 2.1
0.2
-0.7
 0.8
0.1
 -0.9
-1.2
 0.4
-0.3
 0.4
-0.6
 0.3
0.0
 -2.6
 0.7
0.2
-0.2
 1.2
0.1
 -0.1
-0.5
36 MRPL16 mitochondrial ribosomal protein L16 100855464 3.9 2.1
0.8
 1.1
 1.6
 2.4
 -0.6
 0.1
 0.4
 0.6
 0.1
 0.9
 -0.0
 1.3
37 SMPD2 sphingomyelin phosphodiesterase 2 100856377 3.9 2.1
3.5
 0.2
 1.5
 1.4
 -0.7
 1.4
0.6
 -0.7
 0.6
 -0.2
 -0.0
 -0.3
 -0.6
38 UBE2J1 ubiquitin conjugating enzyme E2 J1 474993 3.8 2.0
 2.0
 2.8
 -0.1
 3.3
 -0.3
 -0.4
 -0.5
0.4



39 CD164 CD164 molecule 475020 3.8 2.0
 2.1
 0.8
 0.2
 0.1
 -0.4
 -1.3
 -0.9
 0.4




40 PHF10 PHD finger protein 10 475037 3.8 2.2
 1.7
 6.6
 3.7
 3.2
 2.3
 3.6
 -0.7
 -0.2




41 PPP1R14B protein phosphatase 1 regulatory inhibitor subunit 14B 476035 3.8 2.2
 1.8
 3.0
0.4
 0.9
0.7
 1.1
0.6
 3.1
-0.5
 1.2
-0.9
 1.4
0.2
 0.2
 -1.8
1.1
0.7
 0.7
0.4
 1.1
0.3
42 PSMD5 proteasome 26S subunit, non-ATPase 5 474703 3.8 2.0
1.0
 3.4
 1.1
 -0.5
 2.9
 1.2
 -0.4




43 NAA20 N-alpha-acetyltransferase 20, NatB catalytic subunit 477138 3.8 2.6
 1.3
 1.7
 0.2
 2.1
 2.6
 0.8
 0.8
 -0.1
 0.9
 -0.2
 0.2
 -0.8
 -1.1
44 NT5DC1 5'-nucleotidase domain containing 1 475036 3.8 1.8
 2.3
 3.9
 0.1
1.4
 -0.0
 0.5
 -1.3




45 C12H6orf136 chromosome 12 C6orf136 homolog 474828 3.7 1.6
 2.5
 1.2
 2.4
 -1.7
 -0.8
1.0
 0.3
 1.2



46 MRPS16 mitochondrial ribosomal protein S16 609906 3.7 1.2
 3.0
 2.3
 1.8
 1.3
 1.0
 -0.6
 2.1
 1.3
 0.6
 -0.4


47 OSTM1 osteoclastogenesis associated transmembrane protein 1 612165 3.7 1.6
 2.5
 2.4
 1.3
 0.5
 -1.2
 -0.2
 -1.0
 -1.3




48 RABIF RAB interacting factor 100855654 3.7 2.0
0.9
 0.9
 2.5
 1.1
 3.5
 1.1
 -0.1
 0.4
0.1



49 ASCC3 activating signal cointegrator 1 complex subunit 3 475008 3.7 1.2
 3.0
 1.5
-0.2
 1.0
0.5
 0.6
0.2
 0.1
 0.0
-1.8
 0.3
0.0
 -0.5
-1.0
 0.5
0.4
 1.3
-1.1
 -0.2
 -0.7
 0.9
50 MTX2 metaxin 2 478811 3.7 1.6
 2.4











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