Orthologous genes in OrthoFinder**

Species Gene Description
 sce-m.4   UBP16   putative ubiquitin-specific protease UBP16 
 sce-u.3   UBP16   putative ubiquitin-specific protease UBP16 
 sce-r.3   UBP16   putative ubiquitin-specific protease UBP16 
 hsa-u.4   USP16   ubiquitin specific peptidase 16 
 mmu-u.4   Usp45   ubiquitin specific petidase 45 
 mmu-u.4   Usp16   ubiquitin specific peptidase 16 
 rno-u.3   Usp16   ubiquitin specific peptidase 16 
 rno-u.3   Usp45   ubiquitin specific peptidase 45 
 gga-u.3   USP45   ubiquitin specific peptidase 45 
 gga-u.3   USP16   ubiquitin specific peptidase 16 
 dre-u.3   usp45   ubiquitin specific peptidase 45 
 dre-u.3   usp16   ubiquitin specific peptidase 16 
 dme-u.3   Usp16-45   Ubiquitin specific protease 16/45 
 mcc-u.3   USP16   ubiquitin specific peptidase 16 
 cfa-u.3   USP16   ubiquitin specific peptidase 16 

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Top 50 coexpressed genes to UBP16 (sce-m.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 sce970   Aminoacyl-tRNA biosynthesis  8 40 6.00
 sce3010   Ribosome  7 173 2.43
 sce450   Selenocompound metabolism  1 12 -
 sce860   Porphyrin metabolism  1 17 -
 sce190   Oxidative phosphorylation  1 76 -

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sce:UBP16 (putative ubiquitin-specific protease UBP16) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
UMAP
Gene Function KEGG Entrez
Gene
ID		 Other ID LINK Target Reference

sce-m.4
for
UBP16
sce-u.3
for
UBP16
sce-r.3
for
UBP16
hsa-u.4
for
USP16
mmu-u.4
for
Usp45
mmu-u.4
for
Usp16
rno-u.3
for
Usp16
rno-u.3
for
Usp45
gga-u.3
for
USP45
gga-u.3
for
USP16
dre-u.3
for
usp45
dre-u.3
for
usp16
dme-u.3
for
Usp16-45
mcc-u.3
for
USP16
cfa-u.3
for
USP16
1 IFM1 translation initiation factor 2 854135 YOL023W 3.4 6.9
 3.2
 4.6
 1.8
 2.5
 4.8
 2.4
 -0.5
 4.0
 2.5
 1.5
 -0.0
 3.3
 5.6
2 YFH7 Yfh7p 850558 YFR007W 3.0 4.3
 1.2











3 MSM1 methionine--tRNA ligase MSM1 853081 YGR171C 2.9 5.8
 2.7
 -2.3
 1.6
 1.8
 -0.6
 -0.3
 -0.6
 1.7
 2.4
 1.6
 2.2
 0.4
 0.5
4 MRP13 mitochondrial 37S ribosomal protein YmS-A 852975 YGR084C 2.8 5.4
 2.4











5 PET123 mitochondrial 37S ribosomal protein PET123 854329 YOR158W 2.7 5.9
 2.9











6 MAM33 Mam33p 854740 YIL070C 2.7 5.1
 2.2











7 ATP12 ATP synthase complex assembly protein ATP12 853259 YJL180C 2.6 5.4
 2.6
 -0.4
 0.4
 1.5
 0.4
 -0.2
 1.2
 -0.1
 0.9
 -0.9
 -1.9
 0.3
 -0.6
8 PNT1 Pnt1p 854440 YOR266W 2.6 4.8
 2.1











9 ISM1 isoleucine--tRNA ligase ISM1 856067 YPL040C 2.5 5.7
 3.1
 -0.1
 2.0
 -0.7
 -1.2
 1.2
 2.4
 2.3
 1.0
 2.4
 -1.0
 0.5
 -0.0
10 MSD1 aspartate--tRNA ligase MSD1 856000 YPL104W 2.4 5.0
 2.5
 -2.4
 1.3
 -0.7
 -1.2
 1.1
 -1.0
 -1.1
 3.8
 0.1
 2.9
 -0.2
 1.3
11 MRPL11 mitochondrial 54S ribosomal protein YmL11 851325 YDL202W 2.2 4.7
 2.3











12 GUF1 GTPase GUF1 850996 YLR289W 2.2 4.8
 2.4
 1.8
 1.2
 2.0
 3.5
 1.2
 2.1
 2.5
 2.4
 0.9
1.4
 1.5
13 HER2 glutamyl-tRNA(Gln) amidotransferase subunit HER2 855338 YMR293C 2.2 4.4
 2.1
 2.3
 1.3
 0.6
 1.2
 0.7
 -0.1
 2.7
 3.9
 1.3
 0.9
 0.2
 3.7
14 GEP3 Gep3p 854380 YOR205C 2.2 3.8
 1.5











15 RSM22 mitochondrial 37S ribosomal protein RSM22 853701 YKL155C 2.2 4.4
 2.1











16 RRF1 Rrf1p 856433 YHR038W 2.2 4.1
 1.8











17 COX10 protoheme IX farnesyltransferase 855931 YPL172C 2.2 4.7
 2.4
 -0.1
 -0.9
 0.6
 0.7
 0.3
 -0.7
 -0.1
 2.6
 1.2
 -0.1
 -0.2
 -0.7
18 MRPL31 mitochondrial 54S ribosomal protein YmL31 853720 YKL138C 2.2 4.2
 1.9











19 CCM1 Ccm1p 853053 YGR150C 2.2 4.3
 2.0











20 MRP17 mitochondrial 37S ribosomal protein YmS16 853867 YKL003C 2.1 3.5
 1.3











21 IBA57 Iba57p 853586 YJR122W 2.1 4.1
 1.9
 2.0

-1.0
 0.6
 -1.7
 -0.2
 -0.1
 -0.4
 -0.5
 1.0
 -0.6
22 MRPS9 mitochondrial 37S ribosomal protein MRPS9 852443 YBR146W 2.1 4.0
 1.8
 1.8
 0.8
 0.8
 1.4
 -0.3
 0.3
 2.3
 1.3
 1.0
 -0.8
 1.6
 3.4
23 MRPL24 mitochondrial 54S ribosomal protein YmL24/YmL14 855231 YMR193W 2.1 3.5
 1.4
 -0.7
 1.4
 -0.9
 -1.7
 -0.5
 -2.0
 0.7
 2.0
 2.0
 0.5
 -0.7
 0.8
24 MSC6 Msc6p 854536 YOR354C 2.1 4.5
 2.3











25 PET309 Pet309p 850756 YLR067C 2.0 4.1
 2.0











26 SAM37 SAM complex subunit SAM37 855082 YMR060C 2.0 4.3
 2.1











27 MSY1 tyrosine--tRNA ligase MSY1 856007 YPL097W 2.0 4.5
 2.3
 -0.2
 1.8
 1.8
 -1.0
 0.9
 -0.2
 1.9
 1.2
 1.6
 -1.9
 0.4
 0.4
28 PET117 Pet117p 856786 YER058W 2.0 2.9
 0.8
 0.2



-1.4
 -1.3

-0.2
 0.5
 -0.0
29 YLF2 Ylf2p 856372 YHL014C 2.0 3.9
 1.8











30 NAM2 leucine--tRNA ligase NAM2 851098 YLR382C 2.0 4.3
 2.2
 -1.5
 0.7
 -0.5
 -0.6
 0.7
 2.2
 1.9
 1.8
 2.3
 1.3
 -0.7
 -0.7
31 MRP4 mitochondrial 37S ribosomal protein MRP4 856384 YHL004W 2.0 4.3
 2.2
 -1.5
 -1.1
 0.3
 1.2
 1.4
 -0.6
 1.2
 1.4
 2.1
 -1.8
 -0.4
 -0.4
32 MRP10 mitochondrial 37S ribosomal protein YmS-T 851515 YDL045W-A 1.9 4.0
 1.9











33 RSM27 mitochondrial 37S ribosomal protein RSM27 853129 YGR215W 1.9 2.6
 0.7











34 MIA40 Mia40p 853639 YKL195W 1.9 3.0
 1.1
 -0.6
 -0.2
 1.1
 0.9
 0.1
 0.3
 3.7
 2.0
1.5
 1.8
1.5
-0.2
 1.0
35 OMS1 putative RNA methyltransferase 851911 YDR316W 1.9 3.1
 1.1











36 BCS1 bifunctional AAA family ATPase chaperone/translocase BCS1 851981 YDR375C 1.9 3.7
 1.7
 0.6
 -0.5
 -0.3
 -0.4
 0.6
 -1.3
 0.4
 2.2
 0.6
 -2.6
 -2.0
 -0.8
37 MRP7 mitochondrial 54S ribosomal protein YmL2 855727 YNL005C 1.9 3.1
 1.1
 2.0
 -0.3
 -0.5
 0.9
 -1.2
 -2.1
 0.7
 -0.7
 0.9
 -1.2
 2.4
 1.1
38 MRPL40 mitochondrial 54S ribosomal protein YmL40 855930 YPL173W 1.9 4.2
 2.2











39 TUF1 translation elongation factor Tu 854359 YOR187W 1.8 3.1
 1.2
 -0.9
 -0.5
 0.4
 -0.4
 -1.3

0.5
 0.7
 1.6
0.4
 1.1
 0.8
40 RML2 mitochondrial 54S ribosomal protein RML2 856660 YEL050C 1.8 3.1
 1.2
 -0.6
 0.4
 -1.4
 -1.7
 0.0
 0.7
 0.3
 -1.6
 0.3
 -1.4
 1.0
 0.4
41 MID1 Mid1p 855425 YNL291C 1.8 3.3
 1.4











42 DIA4 putative serine--tRNA ligase DIA4 856402 YHR011W 1.8 3.4
 1.5
 2.1

-1.0
 1.2
 0.3
 2.4
 0.2
 1.0
 -0.1
 -0.8
 0.3
43 SGO1 Sgo1p 854240 YOR073W 1.8 3.7
 1.8











44 MRPL1 mitochondrial 54S ribosomal protein MRPL1 851694 YDR116C 1.8 3.8
 1.9











45 NAM9 mitochondrial 37S ribosomal protein NAM9 855585 YNL137C 1.8 3.4
 1.5











46 MRPL13 mitochondrial 54S ribosomal protein YmL13 853875 YKR006C 1.8 2.9
 1.0











47 MST1 threonine--tRNA ligase MST1 853640 YKL194C 1.8 3.2
 1.4
 2.0
1.2
 2.8
-0.2
 1.5
1.0
 2.8
1.0
 2.0
1.0
 2.6
0.2
 3.8
1.2
 2.0
-1.4
 1.6
0.5
 1.4
 1.7
1.7
 4.5
1.7
48 HOS1 histone deacetylase 856181 YPR068C 1.8 3.3
 1.4











49 MDV1 Mdv1p 853332 YJL112W 1.8 3.3
 1.4
 0.5
 1.5
 2.1
 1.5
 0.7
 2.8
 0.4
 1.6
 0.7
 2.4
 0.1
 -1.3
50 MRPL17 mitochondrial 54S ribosomal protein YmL17/YmL30 855469 YNL252C 1.8 3.6
 1.7











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