Orthologous genes in OrthoFinder**

Species Gene Description
 mmu-r.6   Ythdc1   YTH domain containing 1 
 mmu-u.4   Ythdc1   YTH domain containing 1 
 mmu-m.5   Ythdc1   YTH domain containing 1 
 rno-u.3   Ythdc1   YTH domain containing 1 
 hsa-u.4   YTHDC1   YTH domain containing 1 
 mcc-u.3   YTHDC1   YTH domain containing 1 
 cfa-u.3   YTHDC1   YTH domain containing 1 
 gga-u.3   YTHDC1   YTH domain containing 1 
 dre-u.3   ythdc1   YTH domain containing 1 
 dme-u.3   Ythdc1   YTH domain containing 1 

close


Top 50 coexpressed genes to Ythdc1 (mmu-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 mmu3040   Spliceosome  6 126 7.10
 mmu3015   mRNA surveillance pathway  3 85 3.95
 mmu3013   Nucleocytoplasmic transport  2 101 2.49
 mmu4936   Alcoholic liver disease  2 124 2.24
 mmu5205   Proteoglycans in cancer  2 205 -

close


mmu:Ythdc1 (YTH domain containing 1) External Links;


Show/Hide Columns:          
Show Coexpressed Genes
UMAP
Gene Function KEGG Entrez
Gene
ID		 Other ID CoexPub LINK Target Reference

mmu-r.6
for
Ythdc1
mmu-u.4
for
Ythdc1
mmu-m.5
for
Ythdc1
rno-u.3
for
Ythdc1
hsa-u.4
for
YTHDC1
mcc-u.3
for
YTHDC1
cfa-u.3
for
YTHDC1
gga-u.3
for
YTHDC1
dre-u.3
for
ythdc1
dme-u.3
for
Ythdc1
1 Rbm25 RNA binding motif protein 25 67039 0 11.1 8.0
 1.7
 4.4
 8.9
 4.9
 6.7
 5.7
 5.7
2.3
 4.4
2 Prpf38b PRP38 pre-mRNA processing factor 38 (yeast) domain containing B 66921 0 11.1 8.6
 2.3
 4.8
 6.5
 8.9
 4.7
 3.5
 2.0
 3.2
3 Rbm39 RNA binding motif protein 39 170791 0 10.4 8.9
 3.0
 7.2
 8.6
1.4
 7.3
3.1
 6.6
1.9
 5.0
 5.0
2.5
 8.4
4 Rsrc2 arginine/serine-rich coiled-coil 2 208606 0 10.2 8.6
 2.9
 6.8
 10.7
 8.9
 6.3
 5.6
 3.5
 4.0
5 Sfpq splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) 71514 0 9.6 8.5
 3.1
 7.5
3.6
 6.1
4.7
 3.5
1.3
 5.9
2.1
 2.3
1.7
 2.5
0.9
 1.7
0.7
6 Nsrp1 nuclear speckle regulatory protein 1 237859 0 9.6 7.7
 2.3
 4.8
 6.5
 4.2
 3.7
 5.3
 3.3
 3.7
7 Ppig peptidyl-prolyl isomerase G (cyclophilin G) 228005 0 9.5 7.2
 1.8
 6.7
4.4
 6.4
4.1
 5.3
4.8
 3.9
-0.4
 2.8
-0.8
 3.9
3.4
 5.7
-0.2
8 Top1 topoisomerase (DNA) I 21969 0 8.9 6.7
 1.7
 7.1
-1.5
 4.2
-0.3
 4.8
0.0
 3.2
 4.1
-0.2
 3.8
1.3
 1.2
9 Fam133b family with sequence similarity 133, member B 68152 0 8.9 6.3
 1.3
 5.1
 3.9
0.4
 5.0
0.3
 1.2
 2.2
 3.1
10 Arid4b AT rich interactive domain 4B (RBP1-like) 94246 0 8.8 6.5
 1.6
 9.3
4.5
 7.7
5.7
 4.8
3.6
 5.2
4.7
 6.3
4.8
 6.1
4.5
 4.0
11 Srsf11 serine and arginine-rich splicing factor 11 69207 0 8.7 7.4
 2.5
 6.4
 8.4
 4.9
 3.0
 4.3
 2.4
12 Arglu1 arginine and glutamate rich 1 234023 0 8.6 5.3
 0.4
 5.3
 5.5
 4.9
 2.3
 6.6

13 Sltm SAFB-like, transcription modulator 66660 0 8.4 5.5
 0.7
7.2
 5.7
 5.5
 3.6
 4.4
14 Ppil4 peptidylprolyl isomerase (cyclophilin)-like 4 67418 0 8.4 7.1
 2.3
 4.6
 5.6
 4.5
 6.3
 0.9
 4.8
 1.5
15 Zfp326 zinc finger protein 326 54367 0 8.4 8.4
 3.7
 6.8
 4.0
 5.9
 3.1
 3.3
 -0.4
16 Ddx5 DEAD box helicase 5 13207 0 8.4 9.3
 4.6
 5.1
1.6
 5.2
5.1
 4.2
4.1
 3.1
2.8
 3.2
1.7
 3.6
0.4
 4.8
3.3
17 Rtf1 RTF1, Paf1/RNA polymerase II complex component 76246 0 8.2 5.4
 0.8
 2.8
 4.6
 3.4
 1.9
 1.5
 5.2
 1.1
-0.4
18 Zc3h13 zinc finger CCCH type containing 13 67302 0 8.2 5.4
 0.8
 4.7
 5.8
 3.6
 3.8
 4.6
 4.7
 5.7
19 Rock1 Rho-associated coiled-coil containing protein kinase 1 19877 0 8.1 6.5
 2.0
 3.7
2.6
 3.6
0.0
 4.2
-0.1
 3.5
1.9
 3.5
2.4
 4.8
1.3
 2.1
20 Pcf11 PCF11 cleavage and polyadenylation factor subunit 74737 0 8.0 7.9
 3.4
 6.1
 7.4
 7.2
 4.3
 6.3
 2.1
 4.0
21 Rbm27 RNA binding motif protein 27 225432 0 8.0 5.4
 0.8
 7.0
4.9
 6.3
4.8
 3.1
1.0
 4.5
4.4
 4.8
2.1
 5.5
1.0
 2.4
22 Smarca5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 93762 0 8.0 6.1
 1.6
 5.8
0.2
 7.0
1.1
 3.5
0.3
 4.6
1.0
 4.9
-0.5
 1.6
0.3
 2.0
23 Ccdc174 coiled-coil domain containing 174 232236 0 7.9 7.0
 2.5
 4.5
 6.2
 6.8
 5.8
 3.1
 1.3
 0.5
24 Luc7l3 LUC7-like 3 (S. cerevisiae) 67684 0 7.9 6.7
 2.3
 7.2
 7.3
 4.7
 7.6
 7.3
 4.0
 6.5
25 Upf3b UPF3 regulator of nonsense transcripts homolog B (yeast) 68134 0 7.9 6.7
 2.3
 7.5
2.6
 5.6
 4.6
1.7
 3.8
3.3
 3.8
 4.4
2.0
 1.1
26 Rnf20 ring finger protein 20 109331 0 7.9 6.3
 1.9
 5.2
1.7
 4.1
1.8
 3.2
1.6
 4.3
0.9
 2.2
 3.6
3.2
 3.5
27 Pnn pinin 18949 0 7.8 7.0
 2.6
 6.4
 8.2
 4.8
 4.3
 3.4
 4.6
 -0.6
28 Safb scaffold attachment factor B 224903 0 7.7 6.3
 2.0
 5.3
4.3
 7.3
7.0
 6.3
4.0
 4.4
3.5
 5.4
3.6
 3.1
 7.4
29 U2surp U2 snRNP-associated SURP domain containing 67958 0 7.6 5.5
 1.2
 5.1
 6.1
 7.3
 3.7
 5.1
 3.3
2.8
 2.7
30 Ccar1 cell division cycle and apoptosis regulator 1 67500 0 7.5 6.4
 2.1
 5.8
 5.0
 1.9
 4.5
 3.4
 3.6
31 Bod1l biorientation of chromosomes in cell division 1-like 665775 0 7.3 4.8
 0.7
 4.7
 7.9
 4.3
 2.7
 6.7

32 Paxbp1 PAX3 and PAX7 binding protein 1 67367 0 7.3 6.9
 2.8
 5.3
3.7
 4.0
-0.7
 4.6
0.7
 3.9
 2.5
1.3
 5.7
1.4
 4.4
33 Arid4a AT rich interactive domain 4A (RBP1-like) 238247 0 7.3 5.8
 1.7
 9.3
4.5
 7.7
5.7
 4.8
3.6
 5.2
4.7
 6.3
4.8
 6.1
4.5
 4.0
34 Ctcf CCCTC-binding factor 13018 0 7.3 5.2
 1.1
 5.7
 4.6
 5.3
 3.5
 1.5
 2.6
35 Srek1 splicing regulatory glutamine/lysine-rich protein 1 218543 0 7.2 5.8
 1.8
 4.5
 6.5
 6.8
 2.7
 4.6
 3.6
 2.4
36 Mphosph8 M-phase phosphoprotein 8 75339 0 7.2 5.2
 1.2
 5.5
 6.1
 5.3
 4.6
 5.0
 3.8
37 Zc3h15 zinc finger CCCH-type containing 15 69082 0 7.2 4.7
 0.6
 3.1
 4.3
 3.6
 3.3
 1.2
 -0.1
 -0.8
38 Phf3 PHD finger protein 3 213109 0 7.1 5.2
 1.2
 5.9
 4.2
 6.7
 5.3
 4.6
 1.7
 5.2
39 Tra2b transformer 2 beta 20462 0 7.1 6.7
 2.7
 5.7
4.2
 6.4
5.7
 4.9
4.2
 4.9
2.9
 2.4
1.9
 3.3
1.8
 0.1
40 Nipbl NIPBL cohesin loading factor 71175 0 7.1 5.4
 1.4
 4.8
 4.9
 6.6
 4.0
 6.1
1.4
 4.6
3.5
 0.3
41 Kin Kin17 DNA and RNA binding protein 16588 0 7.1 5.8
 1.8
 2.6
 4.4
 1.9
 4.2
 2.3
 0.7
 0.3
42 Tra2a transformer 2 alpha 101214 0 7.0 7.7
 3.7
 5.7
4.2
 6.4
5.7
 4.9
4.2
 4.9
2.9
 2.4
1.9
 3.3
1.8
 0.1
43 Wac WW domain containing adaptor with coiled-coil 225131 0 7.0 5.4
 1.4
 3.3
 6.3
 3.0
 4.7
 1.8
 1.8
1.2
 4.3
44 Cwc25 CWC25 spliceosome-associated protein 67480 0 6.8 4.9
 1.0
 3.5
 6.9
 4.3
 4.4
 1.5
 4.6
 0.9
45 Senp6 SUMO/sentrin specific peptidase 6 215351 0 6.8 5.0
 1.1
 4.8
2.5
 3.2
1.8
 3.8
3.7
 4.2
2.0
 3.2
1.3
 1.0
-0.3
 5.2
0.3
46 Smc3 structural maintenance of chromosomes 3 13006 0 6.7 5.4
 1.6
 7.3
 4.7
 3.2
 4.8
 2.8
 5.2
 1.5
47 Prpf4b pre-mRNA processing factor 4B 19134 0 6.6 6.7
 3.0
 6.7
 5.7
 6.0
 3.9
 5.9
 6.0
3.4
 1.7
48 Safb2 scaffold attachment factor B2 224902 0 6.6 6.4
 2.7
 5.3
4.3
 7.3
7.0
 6.3
4.0
 4.4
3.5
 5.4
3.6
 3.1
 7.4
49 Ssb Sjogren syndrome antigen B 20823 0 6.6 5.5
 1.8
 4.5
 3.1
 2.5
 2.3
 0.9
 1.7
 -0.5
50 Chd2 chromodomain helicase DNA binding protein 2 244059 0 6.5 6.3
 2.7
 4.9
2.5
 7.4
6.3
 6.5
2.4
 4.6
2.7
 3.6
2.5
 2.5
2.4
 2.3
The preparation time of this page was 0.4 [sec].