Orthologous genes in OrthoFinder**

Species Gene Description
 cfa-r.3   PDCD2   programmed cell death 2 
 cfa-u.3   PDCD2   programmed cell death 2 
 cfa-m.4   PDCD2   programmed cell death 2 
 hsa-u.4   PDCD2   programmed cell death 2 
 mmu-u.4   Pdcd2   programmed cell death 2 
 rno-u.3   Pdcd2   programmed cell death 2 
 mcc-u.3   PDCD2   programmed cell death 2 
 gga-u.3   PDCD2   programmed cell death 2 
 dre-u.3   pdcd2   programmed cell death 2 
 dme-u.3   Zfrp8   Zinc finger protein RP-8 
 cel-u.3   pdcd-2   MYND-type domain-containing protein 
 sce-u.3   TSR4   Tsr4p 
 spo-u.3   SPBC23E6.02   putative ATP-dependent DNA helicase 
 spo-u.3   rad8   ubiquitin-protein ligase E3 Rad8 
 spo-u.3   rhp16   ATP-dependent helicase 

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Top 50 coexpressed genes to PDCD2 (cfa-r.3 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 cfa5016   Huntington disease  9 254 6.95
 cfa5012   Parkinson disease  7 227 6.20
 cfa5020   Prion disease  7 226 6.21
 cfa5014   Amyotrophic lateral sclerosis  7 300 5.30
 cfa5010   Alzheimer disease  7 326 5.03

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cfa:PDCD2 (programmed cell death 2) External Links;


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Show Coexpressed Genes
UMAP
Gene Function KEGG Entrez
Gene
ID		 Other ID LINK Target Reference

cfa-r.3
for
PDCD2
cfa-u.3
for
PDCD2
cfa-m.4
for
PDCD2
hsa-u.4
for
PDCD2
mmu-u.4
for
Pdcd2
rno-u.3
for
Pdcd2
mcc-u.3
for
PDCD2
gga-u.3
for
PDCD2
dre-u.3
for
pdcd2
dme-u.3
for
Zfrp8
cel-u.3
for
pdcd-2
sce-u.3
for
TSR4
spo-u.3
for
SPBC23E6.02
spo-u.3
for
rad8
spo-u.3
for
rhp16
1 ATG5 autophagy related 5 610868 4.4 8.6
 4.6
 3.8
 2.6
 3.6
 1.9
 -0.4
 1.0
 -1.3
 0.5
 1.2
 -1.2
 -0.5
 -0.4
2 C12H6orf120 chromosome 12 C6orf120 homolog 102155644 4.2 8.0
4.5
 1.6
 0.4
 1.5
 1.8
 2.1





3 PSMB1 proteasome 20S subunit beta 1 475040 3.8 7.6
 4.3
 5.2
 4.0
 3.6
 1.7
 2.6
 0.6
 -1.1
 0.7
 -1.1
 -0.5
 1.5
 -0.0
4 REXO4 REX4 homolog, 3'-5' exonuclease 491271 3.0 4.5
 1.5
 1.4
 0.5
 0.6
 1.3
 4.4
 3.5
 4.5
 1.6
 2.8
 1.5
 1.4
 1.0
5 SNRNP27 small nuclear ribonucleoprotein U4/U6.U5 subunit 27 474626 2.8 3.2
 0.2
 -0.1
 1.3
 1.8
 2.6
 3.9
 1.3
 0.9
 -0.3
1.1
 0.5
 1.3
6 HDAC2 histone deacetylase 2 475035 2.7 4.4
 1.9
 4.0
3.5
 0.7
-0.8
 0.6
0.5
 1.7
0.5
 0.5
0.1
 2.3
-0.5
 -1.3
 0.0
-0.1
 -0.3
-1.3


7 LMBRD1 LMBR1 domain containing 1 100856550 2.7 5.0
0.4
 0.7
 1.6
 -1.7
 0.9
 -1.1





8 MKKS MKKS centrosomal shuttling protein 485771 2.6 3.2
 0.4
 2.0
 0.6
 -0.1
 1.4
 0.6
 1.4





9 SDHAF4 succinate dehydrogenase complex assembly factor 4 610894 2.6 6.3
 4.3
 2.2
 -0.4
 -0.4
 1.7
 1.3
 0.4
 0.2
-0.4
 0.8
 0.6


10 MAP3K7 mitogen-activated protein kinase kinase kinase 7 102156745 2.6 4.9
4.4
 -1.2
 -1.0
 1.4
 1.0
 -0.2
 0.4
-0.4
 -0.1
-0.2



11 SNRPN small nuclear ribonucleoprotein polypeptide N 479012 2.6 2.4
 -0.4
 0.7
 0.4
 -0.3
 2.2
1.5
 -0.1
 0.1
 0.5
 1.0
 -0.6


12 CCNG1 cyclin G1 479303 2.6 3.2
 0.5
 1.4
-1.0
 0.2
-0.0
 1.0
0.4
 2.3
-0.2
 1.6
-1.7
 -0.1
-2.9
 -0.9




13 SNX3 sorting nexin 3 613007 2.6 4.7
 2.4
 2.9
-0.6
 0.7
0.1
 -0.2
-0.4
 0.6
0.3
 1.3
0.2
 0.9
0.4
 -0.8
 0.5
 -0.3


14 NAA20 N-alpha-acetyltransferase 20, NatB catalytic subunit 477138 2.6 3.8
 1.3
 1.7
 0.2
 2.1
 2.6
 0.8
 0.8
 -0.1
 0.9
 -0.2
 0.2
 -0.8
 -1.1
15 RNF7 ring finger protein 7 106557459 2.6 4.8
2.6
 0.6
 2.5
 1.7
 0.2
 1.3
 -1.0
 -0.0



16 GRSF1 G-rich RNA sequence binding factor 1 475170 2.5 5.2
 3.0
 2.4
 2.6
 -1.2
 3.0
 3.1
 2.4





17 NUDT9 nudix hydrolase 9 478469 2.5 3.1
 0.4
 -0.4
 1.5
 1.9
 1.2
 2.3
 0.6
 3.0
 0.5



18 TP53RK TP53 regulating kinase 611235 2.5 4.5
 2.2
 2.5
 3.3
1.5
 4.8
4.5
 1.2
 2.7
 3.7
 3.9
 4.8
 3.8


19 ISCU iron-sulfur cluster assembly enzyme 477527 2.4 2.9
 0.5
 1.8
 1.4
 0.3
 1.5
 0.9
 1.7
1.1
 2.6
 0.7
 -0.0
-0.8


20 NIPSNAP2 nipsnap homolog 2 479700 2.4 3.4
 1.0
 1.1
0.2
 1.3
0.0
 -0.6
-0.8
 2.7
0.9
 -0.6
-2.1
 0.1
-0.1
 -1.5
 1.4
-1.0



21 PSMC4 proteasome 26S subunit, ATPase 4 100855613 2.4 4.4
-0.2
 -0.4
 1.0
 -0.1
 1.4
 3.7
 0.9
-0.1
 1.0
 0.1
 -1.2
 0.3
 -0.5
22 PRELID3B PRELI domain containing 3B 477277 2.4 3.6
 1.3
 1.4
-0.1
 -0.3
-1.0
 2.0
0.1
 1.0
-0.7
 1.6
0.4
 1.5
0.1
0.7
 0.0
-0.6
 -0.2
-0.4
 0.7
-0.3
 -1.0
-1.1
23 SUCLA2 succinate-CoA ligase ADP-forming subunit beta 485448 2.3 3.4
 1.1
 0.5
0.3
 -0.1
-0.5
 0.3
-0.3
 1.5
1.0
 -0.4
-0.5
 1.1
-1.1
 0.3
-2.2
 -0.8
-1.3
 -0.2


24 MTRES1 mitochondrial transcription rescue factor 1 100687319 2.3 4.3
1.8
 2.0
 0.5
 2.3
 1.8
 -0.0





25 TMED9 transmembrane p24 trafficking protein 9 481444 2.3 2.2
 -0.2
 1.4
-0.3
 0.0
-1.8
 0.8
-0.3
 2.0
0.8
 0.1
-1.5
 -0.1
-0.2
 0.4
 2.0
0.2
 1.4
0.6
 0.1
 -1.1
 -1.6
26 LOC119881520 phosphoglycolate phosphatase 119881520 2.3 4.3
1.5
0.9
 1.3
1.3
 0.7
-1.2
 1.3
 2.3
1.0
 0.2
-0.2
 0.2
0.1
 -0.7
-1.1
 1.5


27 NDUFAF6 NADH:ubiquinone oxidoreductase complex assembly factor 6 477943 2.3 3.4
 1.2
5.2
 0.6
 3.9
 3.5
 1.6
 2.4
 1.1



28 HNRNPAB heterogeneous nuclear ribonucleoprotein A/B 403666 2.3 4.2
1.6
0.7
 2.1
0.0
 1.6
1.1
 2.7
1.7
 1.6
1.2
 1.1
0.2
 0.4
 -0.1



29 TBP TATA-box binding protein 611193 2.3 5.3
 3.5
 5.3
 1.4
 2.6
 -0.5
 4.4
 2.6
1.4
 3.5
0.3
 1.5
 -0.2


30 SRP9 signal recognition particle 9 611923 2.3 3.4
 1.2
 -0.4
 1.7
 1.2
 2.0
 0.7
 2.4
 -0.5
 1.2
1.3
 1.6
 0.3
31 NDUFV2 NADH:ubiquinone oxidoreductase core subunit V2 480204 2.3 4.0
 1.9
 2.3
 1.5
 0.0
 0.8
 0.7
 0.6
 1.2
0.2
 0.3
0.2
 1.2
 -0.1
32 SLC30A9 solute carrier family 30 member 9 482117 2.3 2.3
 -0.1
 0.3
 -0.4
 -0.4
 1.2
 0.7
 1.9
 -3.1
 -1.1



33 LIPT2 lipoyl(octanoyl) transferase 2 485196 2.2 4.1
 2.0
 0.7
 3.1
 2.8
4.0
 1.9
 0.0
 2.2
 -0.4
 0.3
 0.8
 -0.2
34 PHF10 PHD finger protein 10 475037 2.2 3.8
 1.7
 6.6
 3.7
 3.2
 2.3
 3.6
 -0.7
 -0.2




35 UBA3 ubiquitin like modifier activating enzyme 3 476560 2.2 2.1
 -0.3
 0.4
 0.7
 -0.9
 1.5
 -0.6
 4.2
 1.2
 0.6
 -0.5
 -0.5
 0.3
 -1.8
36 ATIC 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase 488513 2.2 4.4
 2.4
 3.9
 2.1
 0.8
 2.2
 0.2
 -0.6
 -0.1
 -0.6
 0.3
-0.2


37 TMED7 transmembrane p24 trafficking protein 7 481436 2.2 2.6
 0.3
 3.3
0.2
 0.9
-0.0
 0.2
0.2
 3.1
2.0
 0.4
-0.6
 0.3
-0.2
 0.4
-0.1
 2.9
-0.1
 1.0
-0.5


38 PSMD11 proteasome 26S subunit, non-ATPase 11 480610 2.2 2.4
 0.1
 -0.6
 0.7
 0.0
 0.4
 0.8
 3.0
2.5
 -0.4
 0.3
 -0.3
 2.4
0.9
 1.0
0.5
 0.9
-0.1
39 AMZ2 archaelysin family metallopeptidase 2 480461 2.2 2.8
 0.6
 0.2
 -0.3
 -0.2
 0.2







40 RDH14 retinol dehydrogenase 14 100856223 2.2 4.1
4.0
1.6
 2.9
2.3
 1.8
1.6
 4.5
1.7
 2.1
1.1
 2.4
1.9
 1.0
0.6
 1.3
1.2
 0.9


41 PSMA4 proteasome 20S subunit alpha 4 119874448 2.2 4.1
-0.2
 1.6
 1.7
 1.2
 2.6
 0.7
 0.4
-1.0
 1.2
 -0.1
 1.8
1.5
 1.6
-0.6
 1.0
-0.1
42 PPP1R14B protein phosphatase 1 regulatory inhibitor subunit 14B 476035 2.2 3.8
 1.8
 3.0
0.4
 0.9
0.7
 1.1
0.6
 3.1
-0.5
 1.2
-0.9
 1.4
0.2
 0.2
 -1.8
1.1
0.7
 0.7
0.4
 1.1
0.3
43 MDM2 MDM2 proto-oncogene 403693 2.2 2.9
 0.8
 -1.1
 -0.5
 2.2
 -1.1
 0.4
 -1.0





44 MRPL27 mitochondrial ribosomal protein L27 491078 2.2 2.9
 0.7
 -0.6
 0.6
 1.1
 -1.5
 1.2
 1.8
 1.5
 0.0
 -0.6
 -0.5
 0.6
 -2.0
45 MLYCD malonyl-CoA decarboxylase 489688 2.1 4.5
 2.7
 0.9
 2.7
 -0.1
 0.3
 2.1
 -0.4
0.2



46 NDUFA2 NADH:ubiquinone oxidoreductase subunit A2 478032 2.1 3.4
 1.3
 -0.2
 -0.4
 1.2
 0.5
 0.9
 0.4
 0.1
 -0.9



47 NIPA2 NIPA magnesium transporter 2 479002 2.1 2.7
 0.5
 1.9
 -0.4
 1.1
 -1.1
 0.7
0.4
 1.5
-0.5
 2.4
 0.9
-1.1
 0.2
 -0.3
48 MMADHC metabolism of cobalamin associated D 476145 2.1 2.8
 0.6
 2.5
 0.4
 2.3
 -0.1
 -1.2
 0.9
0.3
 1.4
-0.4
 0.7
-0.8
 0.7
 -0.9
49 PSMD6 proteasome 26S subunit, non-ATPase 6 484700 2.1 4.1
 2.2
 1.5
 1.7
 1.6
 1.6
 4.4
 3.4
 1.6
 0.5
 0.9


50 NDUFAF4 NADH:ubiquinone oxidoreductase complex assembly factor 4 475001 2.1 4.4
 2.6
 4.1
 1.2
 1.1
 1.4
 2.9
 3.6
 1.2




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