Publication for Col5a1 and Mmp2

Species	Symbol	Function*	Entrez Gene ID*	Other ID	Gene coexpression	CoexViewer
mmu	Col5a1	collagen, type V, alpha 1	12831			[link]
mmu	Mmp2	matrix metallopeptidase 2	17390

Pubmed ID	Priority	Text
29615716	0.98	Col5a1, Col1a1, Lamb2, Mmp14, Mmp2, Itgb3, Nid1, Igf1, and Cd44 formed a tight cluster within this network, stressing the importance of the establishment of the basement membrane and reorganization of endothelial cells as they acclimate following wound closure.
	0.98	Col5a1, Col5a2, Col8a1, Col18a1, Nid1, and Lamc3, all of which encode for proteins involved in the maintenance of basement membrane, as well as Mmp14 and Mmp2, highlighting the persistent extracellular matrix remodeling.
	0.86	Col5a1, Col8a1, Mmp14, Mmp2, Sele, Cd44, Nid1, Eln, and Fbln5 encode for proteins that form interactions with strong confidence scores greater than 0.9 (Fig. 7d, Supplementary Data S5).
26023920	0.98	COL5a1, ITGA4, VTN, MMP1a, MMP2 and MMP9 were upregulated in the bone healing process in comparison with the control samples (Fig 5).
	0.88	COL5a1 and MMP2 levels presented a growing curve until 14d time period, followed by a decrease in its mRNA levels.
22802911	0.98	COL5A1, COL5A2, COL5A3, COL7A1, COL8A1, MMP2, and ITGB1).
23261783	0.98	Col5a1, MMP-2, and MMP-9, indicating defective ECM transcription in the absence of MMP-28.
24109192	0.98	COL5A1, COL5A2, COL5A3, COL7A1, COL8A1, and MMP2, have been validated as direct targets of miR-29 by reporter gene assays.
26589811	0.98	MMP2 and the osteoclastogenic factor RANKL, in parallel with decreased expression of OPG and wound healing related factors (COL5A1, CTGF, CXCL11, FGF7, ITGA4, ITGA5, SERP1, VTN).
27058578	0.98	Mmp2), collagens (Col3a1, Col5a1, Col6a1, Col6a2, Col14a1 and Col15a1) and tissue inhibitor of metallopeptidase 1 (Timp1).
29774125	0.98	COL5A1, COL7A1) that are components of the extracellular matrix, as well as matrix metalloproteases that breakdown the extracellular matrix (MMP1, MMP2, MMP11, MMP14).
31639302	0.98	Col5a1, Col6a1, Ecm1, Emilin1, Fn1, Hapln1, Lamb3, Postn, Sparc, Spp1, Thbs1, Thbs2, Tnc), and 9 genes encoding modulators of remodeling (Adamts1, Adamts2, Ctgf, Mmp14, Mmp2, Tgfbi, Timp1, Timp2, Timp3) indicated that graphene foam provided a microenvironment conducive to expression of genes that are important in early chondrogenesis.
26221607	0.97	Col5a1, and Eln, which encode type I, III, and V collagen and elastin, but also downregulated MMP-2 and MMP-9 expression.
31227742	0.97	Col5a1, Col6a1) and extracellular matrix (ECM) remodeling (Timp1, Timp2, Mmp2, Pdgfa, Tgfb), see Fig. 5C.
26891705	0.95	COL5A1 is crucial for cardiovascular development; PLVAP helps to maintain vascular permeability of endothelial cells and MMP2 is a target of TGFbeta signalling and an important player in EMT.
29348826	0.95	Col5a1, Ecm1, Sparc, Col1a1, Col3a1, Lama3, and Lamb3) (Figure 7C, middle panel) and metalloproteinases (8 genes: Adamts2, Adamts5, Mmp3, Mmp2, Adamts8, Mmp11, Mmp14, and Mmp15) (Figure 7C, right panel), were also significantly down-regulated in the BLM+ApoJ group compared to those in the BLM+ViaJ group.
19463168	0.83	Mmp2), stathmin 1 (Stmn1), procollagens (Col5a1 and Col6a1), Wisp1 and the receptor tyrosine kinase Axl.