GO:0061629 RNA polymerase II-specific DNA-binding transcription factor binding

322 rno genes in this database. All gene

[QuickGO]

term: RNA polymerase II-specific DNA-binding transcription factor binding
goid: GO:0061629


Shaded genes do not have GeneChip data. The output was limited up to 10000.
Species Symbol Gene
coexpression
Locus
page
Full name* Entrez Gene ID Evidence*
rno Ar androgen receptor 24208 IEA,ISO
rno Cebpb CCAAT/enhancer binding protein beta 24253
rno Fbp1 fructose-bisphosphatase 1 24362 IEA,ISO
rno Grm1 glutamate metabotropic receptor 1 24414
rno Hspb1 heat shock protein family B (small) member 1 24471 IEA,ISO
rno Jun Jun proto-oncogene, AP-1 transcription factor subunit 24516 IEA,ISO
rno Jund JunD proto-oncogene, AP-1 transcription factor subunit 24518
rno Rarb retinoic acid receptor, beta 24706
rno Rb1 RB transcriptional corepressor 1 24708 IEA,ISO
rno Sp1 Sp1 transcription factor 24790 ISO
rno Tp53 tumor protein p53 24842 IPI,ISO
rno Vdr vitamin D receptor 24873
rno Esr1 estrogen receptor 1 24890
rno Prkcb protein kinase C, beta 25023
rno Stat1 signal transducer and activator of transcription 1 25124
rno Stat3 signal transducer and activator of transcription 3 25125 ISO
rno Stat5b signal transducer and activator of transcription 5B 25126
rno Cdkn2a cyclin-dependent kinase inhibitor 2A 25163
rno Gata1 GATA binding protein 1 25172 ISO
rno Arnt aryl hydrocarbon receptor nuclear translocator 25242
rno Arnt2 aryl hydrocarbon receptor nuclear translocator 2 25243
rno Rxra retinoid X receptor alpha 25271
rno Arrb1 arrestin, beta 1 25387
rno Nfkbia NFKB inhibitor alpha 25493
rno Npm1 nucleophosmin 1 25498
rno Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 25513
rno Pou1f1 POU class 1 homeobox 1 25517 IEA,ISO
rno Ywhah tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta 25576
rno Id2 inhibitor of DNA binding 2 25587 ISO
rno Parp1 poly (ADP-ribose) polymerase 1 25591
rno Smad3 SMAD family member 3 25631 ISO
rno Pparg peroxisome proliferator-activated receptor gamma 25664
rno Ppard peroxisome proliferator-activated receptor delta 25682
rno Ahr aryl hydrocarbon receptor 25690
rno Hnf4a hepatocyte nuclear factor 4, alpha 25735 IEA,ISO
rno Pcna proliferating cell nuclear antigen 25737
rno Ppara peroxisome proliferator activated receptor alpha 25747 ISO
rno Ankrd1 ankyrin repeat domain 1 27064 IBA,ISO
rno Strn striatin 29149
rno Lrp2 LDL receptor related protein 2 29216
rno Rnf4 ring finger protein 4 29274
rno Gata6 GATA binding protein 6 29300 IEA,ISO
rno Pkn1 protein kinase N1 29355
rno Neurod1 neuronal differentiation 1 29458 IEA,ISO
rno Notch2 notch receptor 2 29492
rno Padi2 peptidyl arginine deiminase 2 29511
rno Hif1a hypoxia inducible factor 1 subunit alpha 29560
rno Hes1 hes family bHLH transcription factor 1 29577 IEA,ISO
rno Arntl aryl hydrocarbon receptor nuclear translocator-like 29657
rno Psma6 proteasome 20S subunit alpha 6 29673
rno Smad4 SMAD family member 4 50554 IEA,ISO
rno Crebbp CREB binding protein 54244 IEA,ISO
rno Gata4 GATA binding protein 4 54254 ISO
rno Nr4a2 nuclear receptor subfamily 4, group A, member 2 54278
rno Pitx2 paired-like homeodomain 2 54284 ISO
rno Ncor1 nuclear receptor co-repressor 1 54299 ISO
rno Nrbf2 nuclear receptor binding factor 2 58839
rno Nr0b1 nuclear receptor subfamily 0, group B, member 1 58850
rno Nr1h2 nuclear receptor subfamily 1, group H, member 2 58851
rno Nr1h3 nuclear receptor subfamily 1, group H, member 3 58852
rno Nr4a3 nuclear receptor subfamily 4, group A, member 3 58853
rno Nr1h4 nuclear receptor subfamily 1, group H, member 4 60351
rno Crx cone-rod homeobox 60446
rno Hr HR, lysine demethylase and nuclear receptor corepressor 60563
rno Actn4 actinin alpha 4 63836
rno Per2 period circadian regulator 2 63840
rno Hsd17b10 hydroxysteroid (17-beta) dehydrogenase 10 63864
rno Calr calreticulin 64202
rno Isl1 ISL LIM homeobox 1 64444 ISO
rno Mta1 metastasis associated 1 64520 IEA,ISO
rno Dnaja1 DnaJ heat shock protein family (Hsp40) member A1 65028
rno Nup62 nucleoporin 62 65274
rno Apex1 apurinic/apyrimidinic endodeoxyribonuclease 1 79116
rno Anxa4 annexin A4 79124
rno Nr4a1 nuclear receptor subfamily 4, group A, member 1 79240
rno Hsf1 heat shock transcription factor 1 79245
rno Atf4 activating transcription factor 4 79255 ISO
rno Bhlhe40 basic helix-loop-helix family, member e40 79431 IEA,ISO
rno Cdk5rap3 CDK5 regulatory subunit associated protein 3 80278
rno Nfkbib NFKB inhibitor beta 81525
rno Creb1 cAMP responsive element binding protein 1 81646 IEA,ISO
rno Atf2 activating transcription factor 2 81647 IEA,ISO
rno Mapk14 mitogen activated protein kinase 14 81649
rno Gtf2b general transcription factor IIB 81673
rno Ctbp2 C-terminal binding protein 2 81717
rno Actb actin, beta 81822
rno Pias2 protein inhibitor of activated STAT, 2 83422
rno Bcl10 BCL10, immune signaling adaptor 83477
rno Ppargc1a PPARG coactivator 1 alpha 83516
rno Nfe2l2 nuclear factor, erythroid 2-like 2 83619 IEA,ISO
rno Ncoa2 nuclear receptor coactivator 2 83724
rno Src SRC proto-oncogene, non-receptor tyrosine kinase 83805
rno Gtf2a2 general transcription factor 2A subunit 2 83828 IEA,ISO
rno Gtf2a1 general transcription factor 2A subunit 1 83830 IEA,ISO
rno Dll1 delta like canonical Notch ligand 1 84010
rno Grip1 glutamate receptor interacting protein 1 84016
rno Gsk3b glycogen synthase kinase 3 beta 84027 ISO
rno Dnmt1 DNA methyltransferase 1 84350
rno Ctnnb1 catenin beta 1 84353 ISO,ISS
rno Nr1i2 nuclear receptor subfamily 1, group I, member 2 84385
rno Asah1 N-acylsphingosine amidohydrolase 1 84431
rno Tgfb1i1 transforming growth factor beta 1 induced transcript 1 84574
rno Hdac2 histone deacetylase 2 84577 ISO
rno Hdac3 histone deacetylase 3 84578
rno Hdac5 histone deacetylase 5 84580 ISO
rno Ncoa3 nuclear receptor coactivator 3 84584
rno Bud31 BUD31 homolog 89819
rno Bbs2 Bardet-Biedl syndrome 2 113948 ISO
rno Pitx1 paired-like homeodomain 1 113983 IEA,ISO
rno Egr2 early growth response 2 114090 IEA,ISO
rno Tmf1 TATA element modulatory factor 1 114206
rno Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 114490 IEA,ISO
rno Gbx2 gastrulation brain homeobox 2 114500 IEA,ISO
rno Pou4f1 POU class 4 homeobox 1 114503 IPI
rno Klf4 Kruppel like factor 4 114505 IEA,ISO
rno Ipo13 importin 13 116458
rno Ncoa6 nuclear receptor coactivator 6 116464
rno Akap8 A-kinase anchoring protein 8 116633
rno Hmga1 high mobility group AT-hook 1 117062
rno Ptpn2 protein tyrosine phosphatase, non-receptor type 2 117063
rno Bhlhe41 basic helix-loop-helix family, member e41 117095 IEA,ISO
rno Zbtb7a zinc finger and BTB domain containing 7a 117107
rno Nr0b2 nuclear receptor subfamily 0, group B, member 2 117274
rno Park7 Parkinsonism associated deglycase 117287
rno Tbp TATA box binding protein 117526 ISO
rno Chd4 chromodomain helicase DNA binding protein 4 117535 ISO
rno Uba3 ubiquitin-like modifier activating enzyme 3 117553
rno Flt3 Fms related receptor tyrosine kinase 3 140635
rno Faf1 Fas associated factor 1 140657
rno Daxx death-domain associated protein 140926
rno Psmc3ip PSMC3 interacting protein 140938
rno Hey2 hes-related family bHLH transcription factor with YRPW motif 2 155430 IEA,ISO
rno Lef1 lymphoid enhancer binding factor 1 161452
rno Ifi27 interferon, alpha-inducible protein 27 170512 ISO
rno Lhx3 LIM homeobox 3 170671 IEA,ISO
rno Mtdh metadherin 170910 ISO
rno Ep300 E1A binding protein p300 170915 ISO
rno Cry2 cryptochrome circadian regulator 2 170917
rno Tcf3 transcription factor 3 171046 IEA,ISO
rno Mms19 MMS19 homolog, cytosolic iron-sulfur assembly component 171124
rno Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 171379
rno Wbp2 WW domain binding protein 2 192645
rno Myocd myocardin 246297 IEA,ISO
rno Tcf21 transcription factor 21 252856
rno Sra1 steroid receptor RNA activator 1 252891
rno Fkbp4 FKBP prolyl isomerase 4 260321
rno Hspa4 heat shock protein family A (Hsp70) member 4 266759 IPI
rno Prrx1 paired related homeobox 1 266813 IEA,ISO
rno Aip aryl-hydrocarbon receptor-interacting protein 282827
rno Spop speckle type BTB/POZ protein 287643 IEA,ISO
rno Ddx5 DEAD-box helicase 5 287765
rno Hcls1 hematopoietic cell specific Lyn substrate 1 288077 IEA,ISO
rno Taf6 TATA-box binding protein associated factor 6 288533
rno Mixl1 Mix paired-like homeobox 1 289311 ISO
rno Xbp1 X-box binding protein 1 289754 ISO
rno C1d C1D nuclear receptor corepressor 289810
rno Uimc1 ubiquitin interaction motif containing 1 290997
rno Id4 inhibitor of DNA binding 4, HLH protein 291023 IEA,ISO
rno Mkx mohawk homeobox 291228 ISO
rno Ctdp1 CTD phosphatase subunit 1 291414
rno Ppargc1b PPARG coactivator 1 beta 291567
rno Brd8 bromodomain containing 8 291691
rno Taf4b TATA-box binding protein associated factor 4b 291773
rno Rbbp8 RB binding protein 8, endonuclease 291787 IEA,ISO
rno Cnot1 CCR4-NOT transcription complex, subunit 1 291841
rno Setd6 SET domain containing 6, protein lysine methyltransferase 291844
rno Wwp2 WW domain containing E3 ubiquitin protein ligase 2 291999 IEA,ISO
rno Tbxt T-box transcription factor T 292301 IEA,ISO
rno Med25 mediator complex subunit 25 292889
rno Ankrd42 ankyrin repeat domain 42 293117
rno Taf10 TATA-box binding protein associated factor 10 293345
rno Pagr1 Paxip1-associated glutamate-rich protein 1 293500
rno Brms1 BRMS1, transcriptional repressor and anoikis regulator 293668
rno Tead3 TEA domain transcription factor 3 294299 IEA,ISO
rno Exosc9 exosome component 9 294975 IPI
rno Nhlh2 nescient helix loop helix 2 295327 IEA,ISO
rno Tnni3k TNNI3 interacting kinase 295531 IBA
rno Tp53bp1 tumor protein p53 binding protein 1 296099 IEA,ISO
rno Ddrgk1 DDRGK domain containing 1 296162 IEA,ISO
rno Commd7 COMM domain containing 7 296285
rno Smarcd3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 296732
rno Foxp1 forkhead box P1 297480
rno Sdr16c5 short chain dehydrogenase/reductase family 16C, member 5 297805 ISO
rno Arid1a AT-rich interaction domain 1A 297867
rno Hdac1 histone deacetylase 1 297893 ISO
rno Rad23b RAD23 homolog B, nucleotide excision repair protein 298012 ISO
rno Kdm4c lysine demethylase 4C 298144
rno Dmap1 DNA methyltransferase 1-associated protein 1 298447 IEA,ISO
rno Srarp steroid receptor associated and regulated protein 298602
rno Ttc8 tetratricopeptide repeat domain 8 299246 ISO
rno Setd3 SET domain containing 3, actin histidine methyltransferase 299295 ISO
rno Med16 mediator complex subunit 16 299607
rno Cry1 cryptochrome circadian regulator 1 299691
rno Med30 mediator complex subunit 30 299905
rno Foxh1 forkhead box H1 300054
rno Med17 mediator complex subunit 17 300367
rno Bbs4 Bardet-Biedl syndrome 4 300754 ISO
rno Rnf25 ring finger protein 25 301515
rno Med13 mediator complex subunit 13 303403
rno Smarce1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 303518
rno Wipi1 WD repeat domain, phosphoinositide interacting 1 303630
rno Parp9 poly (ADP-ribose) polymerase family, member 9 303905
rno Ets2 ETS proto-oncogene 2, transcription factor 304063
rno Nrip1 nuclear receptor interacting protein 1 304157
rno Rnf6 ring finger protein 6 304271
rno Dhx9 DExH-box helicase 9 304859 IEA,ISO
rno Tp53bp2 tumor protein p53 binding protein, 2 305025
rno Prox1 prospero homeobox 1 305066
rno Nkx3-1 NK3 homeobox 1 305999
rno Med4 mediator complex subunit 4 306030
rno Dusp26 dual specificity phosphatase 26 306527 IEA,ISO
rno Tacc1 transforming, acidic coiled-coil containing protein 1 306562
rno Nsd1 nuclear receptor binding SET domain protein 1 306764
rno Tcerg1 transcription elongation regulator 1 307474 ISO
rno Taf7 TATA-box binding protein associated factor 7 307485
rno Sall1 spalt-like transcription factor 1 307740 ISO
rno Lats1 large tumor suppressor kinase 1 308265
rno Nfkbid NFKB inhibitor delta 308496
rno Tacc2 transforming, acidic coiled-coil containing protein 2 309025
rno Bbs1 Bardet-Biedl syndrome 1 309156 ISO
rno Rela RELA proto-oncogene, NF-kB subunit 309165
rno Ankrd2 ankyrin repeat domain 2 309374 IBA,ISO
rno Hif1an hypoxia inducible factor 1 subunit alpha inhibitor 309434
rno Ldb1 LIM domain binding 1 309447 ISO
rno Taf11 TATA-box binding protein associated factor 11 309638
rno Sirt1 sirtuin 1 309757
rno Mef2a myocyte enhancer factor 2a 309957 IEA,ISO
rno Lrif1 ligand dependent nuclear receptor interacting factor 1 310775
rno Mkks MKKS centrosomal shuttling protein 311456 ISO
rno Asxl1 ASXL transcriptional regulator 1 311553
rno Tox2 TOX high mobility group box family member 2 311615 IPI
rno Gfi1b growth factor independent 1B transcriptional repressor 311832 IEA,ISO
rno Kdm3a lysine demethylase 3A 312440
rno Xpc XPC complex subunit, DNA damage recognition and repair factor 312560 ISO
rno Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor 313507 IEA,ISO
rno Thrap3 thyroid hormone receptor associated protein 3 313591
rno Mad2l2 mitotic arrest deficient 2 like 2 313702 IEA,ISO
rno Ncoa1 nuclear receptor coactivator 1 313929
rno Lpin1 lipin 1 313977 ISO
rno Fos Fos proto-oncogene, AP-1 transcription factor subunit 314322 IEA,ISO
rno Elk1 ETS transcription factor ELK1 314436 IEA,ISO
rno Tob2 transducer of ERBB2, 2 315159
rno Tbx20 T-box transcription factor 20 315497 IEA,ISO
rno Trip4 thyroid hormone receptor interactor 4 315769
rno Tbx18 T-box transcription factor 18 315870 ISO
rno Dcaf1 DDB1 and CUL4 associated factor 1 315987
rno Eomes eomesodermin 316052 IEA,ISO
rno Trerf1 transcriptional regulating factor 1 316219
rno Arid5a AT-rich interaction domain 5A 316327
rno Trip12 thyroid hormone receptor interactor 12 316575
rno Hes6 hes family bHLH transcription factor 6 316626 ISO
rno Taf1 TATA-box binding protein associated factor 1 317256 ISO
rno Foxp3 forkhead box P3 317382
rno Fus FUS RNA binding protein 317385
rno Gsc goosecoid homeobox 317715 IEA,ISO
rno Myod1 myogenic differentiation 1 337868 ISO
rno Gtf2i general transcription factor II I 353256 IEA,ISO
rno Tbx3 T-box transcription factor 3 353305 IEA,ISO
rno Dnaja3 DnaJ heat shock protein family (Hsp40) member A3 360481
rno Ncor2 nuclear receptor co-repressor 2 360801
rno Ddx54 DEAD-box helicase 54 360815
rno Gas2l1 growth arrest-specific 2 like 1 360973
rno Gtf2h1 general transcription factor IIH subunit 1 361580
rno Mta2 metastasis associated 1 family, member 2 361724 ISO
rno Rxrb retinoid X receptor beta 361801
rno Smarcb1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 361825
rno Bbs7 Bardet-Biedl syndrome 7 361930 ISO
rno Ppid peptidylprolyl isomerase D 361967
rno Bbs5 Bardet-Biedl syndrome 5 362142 ISO
rno Lmo2 LIM domain only 2 362176 IEA,ISO
rno Cpne1 copine 1 362249
rno Ptprt protein tyrosine phosphatase, receptor type, T 362263
rno Mdfic MyoD family inhibitor domain containing 362325
rno Hipk2 homeodomain interacting protein kinase 2 362342 ISO
rno Tada3 transcriptional adaptor 3 362414
rno Dcaf13 DDB1 and CUL4 associated factor 13 362902
rno Sin3a SIN3 transcription regulator family member A 363067 IEA,ISO
rno Dnaaf4 dynein axonemal assembly factor 4 363096
rno Hdac4 histone deacetylase 4 363287 IEA,ISO
rno Bcas3 BCAS3, microtubule associated cell migration factor 363662
rno Hira histone cell cycle regulator 363849 ISO
rno Tbx6 T-box transcription factor 6 365371 IEA,ISO
rno Lcor ligand dependent nuclear receptor corepressor 365462
rno Spi1 Spi-1 proto-oncogene 366126 ISO
rno Prpf6 pre-mRNA processing factor 6 366276
rno Foxl2 forkhead box L2 367152
rno Med1 mediator complex subunit 1 497991
rno Dtx3l deltex E3 ubiquitin ligase 3L 498089
rno Fam220a family with sequence similarity 220, member A 498145
rno Slc30a9 solute carrier family 30 member 9 498358
rno Commd6 COMM domain containing 6 498559
rno Ncoa7 nuclear receptor coactivator 7 498995
rno Prmt2 protein arginine methyltransferase 2 499420
rno Sox2 SRY-box transcription factor 2 499593 ISO
rno Foxp2 forkhead box P2 500037
rno Trim24 tripartite motif-containing 24 500084
rno Kdm1a lysine demethylase 1A 500569 ISO
rno Dact1 dishevelled-binding antagonist of beta-catenin 1 500666 IEA,ISO
rno Snw1 SNW domain containing 1 500695
rno Bbs10 Bardet-Biedl syndrome 10 500832 ISO
rno Srf serum response factor 501099 ISO
rno Med24 mediator complex subunit 24 619436
rno Rnf14 ring finger protein 14 619577
rno Rbpj recombination signal binding protein for immunoglobulin kappa J region 679028 ISO
rno Med12 mediator complex subunit 12 679693
rno Tcf7l2 transcription factor 7 like 2 679869 ISO
rno Prame PRAME nuclear receptor transcriptional regulator 680000
rno Taf4 TATA-box binding protein associated factor 4 682097
rno Trim68 tripartite motif containing 68 684189
rno Rarg retinoic acid receptor, gamma 685072
rno Tcf23 transcription factor 23 688600 IEA,ISO
rno Gabarapl1 GABA type A receptor associated protein like 1 689161
rno Prdm13 PR/SET domain 13 689695 IEA,ISO
rno Ccdc62 coiled-coil domain containing 62 689909
rno Sumo2 small ubiquitin-like modifier 2 690244
rno Spen spen family transcriptional repressor 690911 IEA,ISO
rno Zfpm1 zinc finger protein, multitype 1 691504 ISO
rno Kdm5d lysine demethylase 5D 100312983
rno H2bc9 H2B clustered histone 9 100359692
rno Zfp366 zinc finger protein 366 100360041
rno Nfatc1 nuclear factor of activated T-cells 1 100361818 ISO
rno Hspa1b heat shock protein family A (Hsp70) member 1B 108348108


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