GO:0006357 regulation of transcription by RNA polymerase II

312 gga genes in this database. All gene

[QuickGO]

term: regulation of transcription by RNA polymerase II
goid: GO:0006357


Shaded genes do not have GeneChip data. The output was limited up to 10000.
Species Symbol Gene
coexpression
Locus
page
Full name* Entrez Gene ID Evidence*
gga TENM2 teneurin transmembrane protein 2 373854
gga RAX2 retina and anterior neural fold homeobox 2 373893 IBA
gga ARNTL2 aryl hydrocarbon receptor nuclear translocator-like 2 373925 IBA
gga EGR1 early growth response 1 373931
gga HOXA13 homeobox A13 373934 IBA
gga LHX3 LIM homeobox 3 373940 IBA
gga PRRX1 paired related homeobox 1 373941 IBA
gga TBX20 T-box 20 373943 IBA
gga HDAC1 histone deacetylase 1 373961
gga DLX5 distal-less homeobox 5 373969 IBA
gga IRX4 iroquois homeobox 4 373974 IBA
gga PCNA proliferating cell nuclear antigen 373984
gga TBX5 T-box 5 373988 IBA
gga CLOCK clock circadian regulator 373991 IBA
gga MYOG myogenin 374004 IBA
gga BARX1 BARX homeobox 1 374017 IBA
gga SOX3 SRY-box 3 374019
gga MYOD1 myogenic differentiation 1 374048 IBA
gga SMAD6 SMAD family member 6 374096 IBA
gga SCX scleraxis bHLH transcription factor 374101 IBA
gga ARNTL aryl hydrocarbon receptor nuclear translocator like 374115 IBA
gga PER2 period circadian clock 2 374116
gga UBE2I ubiquitin conjugating enzyme E2 I 374123
gga NR3C2 nuclear receptor subfamily 3 group C member 2 374131 IBA
gga ERG ETS transcription factor ERG 374146 IBA
gga SOX9 SRY-box 9 374148 IBA
gga ACTR3 ARP3 actin related protein 3 homolog 374197
gga PITX1 paired like homeodomain 1 374201 IEA
gga TBX3 T-box 3 374202 IBA
gga HDAC4 histone deacetylase 4 374207
gga POU1F1 POU class 1 homeobox 1 374215 IBA
gga DPF2 double PHD fingers 2 374236
gga CHEK1 checkpoint kinase 1 374260
gga BMP2 bone morphogenetic protein 2 378779
gga SIX3 SIX homeobox 3 378786 IBA
gga TFCP2 transcription factor CP2 378900 IBA
gga RB1 RB transcriptional corepressor 1 386582 IEA
gga NR2F2 nuclear receptor subfamily 2 group F member 2 386585 IBA
gga IGF2 insulin like growth factor 2 395097
gga CCNL2 cyclin L2 395124 IBA
gga SMAD3 SMAD family member 3 395132 IBA
gga BHLHE22 basic helix-loop-helix family member e22 395164 IBA
gga BSX brain specific homeobox 395183 IBA
gga RARA retinoic acid receptor alpha 395213
gga HOXA3 homeobox A3 395231 IBA
gga HOPX HOP homeobox 395241 IBA
gga MSX2 msh homeobox 2 395245 IBA
gga ATVR1 serine/threonine-protein kinase receptor 395246
gga SSBP3 single stranded DNA binding protein 3 395250
gga DMBX1 diencephalon/mesencephalon homeobox 1 395271 IBA
gga HOXA7 homeobox A7 395290 IBA
gga SP3 Sp3 transcription factor 395302 IBA
gga HOXA4 homeobox A4 395307 IBA
gga CDX4 caudal type homeobox 4 395320 IBA
gga HOXA11 homeobox A11 395327 IBA
gga HOXD11 homeobox D11 395328 IBA
gga DPF3 double PHD fingers 3 395351
gga DPF1 D4, zinc and double PHD fingers family 1 395352
gga GBX1 gastrulation brain homeobox 1 395377 IBA
gga ATOH7 atonal bHLH transcription factor 7 395388 IBA
gga RBBP7 RB binding protein 7, chromatin remodeling factor 395390
gga WNT3A Wnt family member 3A 395396
gga CDX1 caudal type homeobox 1 395397 IBA
gga ZBTB7A zinc finger and BTB domain containing 7A 395411 IBA
gga MSGN1 mesogenin 1 395419 IBA
gga NPAS2 neuronal PAS domain protein 2 395433 IBA
gga SOX8 SRY-box 8 395483 IEA
gga MYO6 myosin VI 395487
gga HOXB3 homeobox B3 395502 IEA
gga HDAC3 histone deacetylase 3 395506
gga MAFK MAF bZIP transcription factor K 395518 IBA
gga MAFF MAF bZIP transcription factor F 395519 IBA
gga POU4F1L POU class 4 homeobox 1 like 395521 IBA
gga SOX14 SRY-box 14 395526
gga VSX2 visual system homeobox 2 395536
gga VSX1 visual system homeobox 1 395537 IEA
gga TEAD4 TEA domain transcription factor 4 395542 IBA
gga SOX10 SRY-box 10 395573 IBA
gga VAX1 ventral anterior homeobox 1 395582 IBA
gga CER1 cerberus 1, DAN family BMP antagonist 395623
gga LDB2 LIM domain binding 2 395631
gga MYF5 myogenic factor 5 395633 IBA
gga HDAC2 histone deacetylase 2 395635
gga RELB v-rel avian reticuloendotheliosis viral oncogene homolog B 395656 IBA
gga MEF2A myocyte enhancer factor 2A 395670 IBA
gga SMAD5 SMAD family member 5 395679 IBA
gga HOXC8 homeobox C8 395711 IBA
gga HMGB1 high mobility group box 1 395724 IBA
gga ATF2 activating transcription factor 2 395727 IBA
gga PAX9 paired box 9 395740 IBA
gga NEUROD1 neuronal differentiation 1 395754 IBA
gga TBXT T-box transcription factor T 395782 IBA
gga TCF15 transcription factor 15 (basic helix-loop-helix) 395788 IBA
gga TBX6 T-box 6 395792 IBA
gga TBX19 T-box transcription factor 19 395793 IBA
gga FOXD3 forkhead box D3 395794 IBA
gga IHH indian hedgehog 395801
gga PROX1 prospero homeobox 1 395802 IBA
gga TEAD3 TEA domain transcription factor 3 395810 IBA
gga SLC11A1 solute carrier family 11 member 1 395811
gga HAND1 heart and neural crest derivatives expressed 1 395812 IBA
gga HAND2 heart and neural crest derivatives expressed 2 395813 IBA
gga GREM1 gremlin 1, DAN family BMP antagonist 395826
gga MIXL1 Mix paired-like homeobox 395838 IBA
gga SIX6 SIX homeobox 6 395843 IBA
gga H2AFY H2A histone family, member Y 395858
gga PITX2 paired like homeodomain 2 395862 IBA
gga HESX1 HESX homeobox 1 395864 IBA
gga TLX3 T-cell leukemia homeobox 3 395867 IBA
gga TLX1 T-cell leukemia homeobox 1 395868 IBA
gga MAFA MAF bZIP transcription factor A 395881 IBA
gga HOXB1 homeobox B1 395900 IBA
gga ZFHX4 zinc finger homeobox 4 395904 IBA
gga NME2 NME/NM23 nucleoside diphosphate kinase 2 395916
gga RREB1 ras responsive element binding protein 1 395920 IBA
gga PAX6 paired box 6 395943 IBA
gga GBX1 gastrulation brain homeobox 1 395950 IBA
gga LDB1 LIM domain binding 1 395952
gga GLI2 GLI family zinc finger 2 395956 IBA
gga NR5A2 nuclear receptor subfamily 5 group A member 2 395961 IBA
gga IKZF1 IKAROS family zinc finger 1 395974 IBA
gga GFI1B growth factor independent 1B transcriptional repressor 395977 IBA
gga VDR vitamin D (1,25- dihydroxyvitamin D3) receptor 395988 IBA
gga TSC22D1 TSC22 domain family member 1 396005 IEA
gga RELA RELA proto-oncogene, NF-kB subunit 396027 IBA
gga NFKB1 nuclear factor kappa B subunit 1 396033 IBA
gga GLI1 GLI family zinc finger 1 396045 IBA
gga HOXA2 homeobox A2 396055 IBA
gga ZBTB14 zinc finger and BTB domain containing 14 396070 IBA
gga NKX2-5 NK2 homeobox 5 396073 IBA
gga NR2E1 nuclear receptor subfamily 2 group E member 1 396082 IBA
gga FGF1 fibroblast growth factor 1 396094
gga HOXA9 homeobox A9 396096 IBA
gga ESR1 estrogen receptor 1 396099 IBA
gga SRF serum response factor 396103 IBA
gga SOX11 SRY-box 11 396104
gga SOX2 SRY-box 2 396105
gga FOXD1 forkhead box D1 396109 IBA
gga FOXG1 forkhead box G1 396110 IBA
gga IRF2 interferon regulatory factor 2 396115 IBA
gga INHBB inhibin beta B subunit 396126
gga E2F1 E2F transcription factor 1 396142 IEA
gga ACTR2 ARP2 actin related protein 2 homolog 396147
gga HIC1 HIC ZBTB transcriptional repressor 1 396164
gga BMP4 bone morphogenetic protein 4 396165
gga YAP1 Yes associated protein 1 396171
gga HOXD12 homeobox D12 396178 IEA
gga HHEX hematopoietically expressed homeobox 396182 IBA
gga CEBPB CCAAT/enhancer binding protein beta 396185 IBA
gga PGR progesterone receptor 396198 IBA
gga TP53 tumor protein p53 396200 IBA
gga NPM1 nucleophosmin 396203
gga NFYB nuclear transcription factor Y subunit beta 396205 IBA
gga NFIX nuclear factor I X 396207 IBA
gga NFIC nuclear factor I C 396208 IBA
gga NFIB nuclear factor I B 396209 IBA
gga NFIA nuclear factor I A 396210 IBA
gga CSF3 colony stimulating factor 3 396216
gga ITGA6 integrin subunit alpha 6 396226
gga HRAS HRas proto-oncogene, GTPase 396229
gga HOXB4 homeobox B4 396230 IBA
gga RXRG retinoid X receptor gamma 396231 IBA
gga HMGB3 high mobility group box 3 396232 IBA
gga ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 396235 IBA
gga MYB MYB proto-oncogene, transcription factor 396244
gga RAF1 Raf-1 proto-oncogene, serine/threonine kinase 396245
gga BZFP1 B-locus zinc finger protein 1 396247 IBA
gga ETS2 ETS proto-oncogene 2, transcription factor 396250 IBA
gga THRA thyroid hormone receptor alpha 396251
gga MYBL2 MYB proto-oncogene like 2 396258
gga RARB retinoic acid receptor beta 396266
gga GSC goosecoid homeobox 396273 IBA
gga CTCF CCCTC-binding factor 396274 IBA
gga TAL1 TAL bHLH transcription factor 1, erythroid differentiation factor 396298 IBA
gga HOXD8 homeobox D8 396301 IBA
gga LMX1B LIM homeobox transcription factor 1 beta 396312 IBA
gga FGF8 fibroblast growth factor 8 396313
gga PRRX2 paired related homeobox 2 396314 IEA
gga ACVR2A activin A receptor type 2A 396324
gga IRF7 interferon regulatory factor 7 396330 IBA
gga SEMA4D semaphorin 4D 396331
gga TCF12 transcription factor 12 396334 IBA
gga TGIF1 TGFB induced factor homeobox 1 396339 IBA
gga CCND1 cyclin D1 396341
gga TEF TEF, PAR bZIP transcription factor 396342 IBA
gga LOC396347 transcription factor 7-like 2 (T-cell specific, HMG-box) 396347 IBA
gga INHBA inhibin beta A subunit 396361 ISS
gga LHX1 LIM homeobox 1 396381 IEA
gga ISL2 ISL LIM homeobox 2 396382 IBA
gga ISL1 ISL LIM homeobox 1 396383 IBA
gga IRF1 interferon regulatory factor 1 396384 IBA
gga IRF8 interferon regulatory factor 8 396385 IBA
gga GATA6 GATA binding protein 6 396390 IBA
gga GATA5 GATA binding protein 5 396391 IEA
gga GATA4 GATA binding protein 4 396392 IBA
gga LHX9 LIM homeobox 9 396397 IBA
gga GDF2 growth differentiation factor 2 396412
gga FGF2 fibroblast growth factor 2 396413
gga HOXD13 homeobox D13 396415 IBA
gga THRB thyroid hormone receptor beta 396431
gga PTH parathyroid hormone 396436
gga TXN thioredoxin 396437
gga PRL prolactin 396453
gga POU2F1 POU class 2 homeobox 1 396463 IBA
gga HMGB2 high mobility group box 2 396482 IBA,ISS
gga MSX1 msh homeobox 1 396484 IBA
gga REL REL proto-oncogene, NF-kB subunit 396500 IBA
gga FOS Fos proto-oncogene, AP-1 transcription factor subunit 396512 IBA
gga AGRN agrin 396538
gga ZBTB17 zinc finger and BTB domain containing 17 396541 IBA
gga HMX1 H6 family homeobox 1 396546 IBA
gga ADCYAP1 adenylate cyclase activating polypeptide 1 408251
gga CDH13 cadherin 13 414849
gga BRD7 bromodomain containing 7 415730 IBA
gga GATA2 GATA binding protein 2 416018 IBA
gga FOXP1 forkhead box P1 416092 IBA
gga HNF1A HNF1 homeobox A 416967 IBA
gga MED22 mediator complex subunit 22 417159 IEA
gga CDK9 cyclin dependent kinase 9 417226
gga AATF apoptosis antagonizing transcription factor 417653 IBA
gga TADA2A transcriptional adaptor 2A 417656 IBA
gga TFEC transcription factor EC 417773 IBA
gga DBX2 developing brain homeobox 2 417801 IBA
gga MYF6 myogenic factor 6 417873 IBA
gga LUM lumican 417891
gga NFE2L1 nuclear factor, erythroid 2 like 1 417987 IBA
gga IGF1 insulin like growth factor 1 418090
gga STRAP serine/threonine kinase receptor associated protein 418175
gga SUPT20H SPT20 homolog, SAGA complex component 418896 IBA
gga MED17 mediator complex subunit 17 419000 IBA,ISS
gga GATA3 GATA binding protein 3 419106 IBA
gga MAFB MAF bZIP transcription factor B 419173 IBA
gga SSU72 SSU72 homolog, RNA polymerase II CTD phosphatase 419410
gga MAD2L2 MAD2 mitotic arrest deficient-like 2 (yeast) 419493
gga LOXL2 lysyl oxidase like 2 419533
gga MED20 mediator complex subunit 20 419926 IBA
gga STAT3 signal transducer and activator of transcription 3 420027 IBA,ISS
gga PHF20L1 PHD finger protein 20-like 1 420323 IBA
gga MYC v-myc avian myelocytomatosis viral oncogene homolog 420332 IBA
gga LOC420362 heat shock transcription factor 1 420362 IBA
gga HDAC9 histone deacetylase 9 420599
gga HOXA6 homeobox A6 420630 IBA
gga GLI3 GLI family zinc finger 3 420769 IBA
gga RPRD1A regulation of nuclear pre-mRNA domain containing 1A 420953
gga SMYD2 SET and MYND domain containing 2 421361
gga RCOR3 REST corepressor 3 421380 IBA
gga FOSL2 FOS like 2, AP-1 transcription factor subunit 421416 IBA
gga NCOA7 nuclear receptor coactivator 7 421717 IBA
gga HSF2 heat shock transcription factor 2 421724 IBA
gga CCNC cyclin C 421791 IBA
gga HMGN2P46 high mobility group nucleosomal binding domain 2 pseudogene 46 421853
gga TAF1B TATA-box binding protein associated factor, RNA polymerase I subunit B 421933 IBA
gga ASXL2 additional sex combs like 2, transcriptional regulator 421993
gga ELP3 elongator acetyltransferase complex subunit 3 422021 ISS
gga HSF3 Heat shock factor protein 3 422169 IBA
gga HDX highly divergent homeobox 422272 IBA
gga CNOT7 CCR4-NOT transcription complex subunit 7 422733
gga LCORL ligand dependent nuclear receptor corepressor like 422820 IBA
gga KDM3A lysine demethylase 3A 422917 IBA
gga BRMS1L breast cancer metastasis-suppressor 1-like 423328
gga SETD3 SET domain containing 3, actin histidine methyltransferase 423445
gga ARID5B AT-rich interaction domain 5B 423661 IBA
gga CHUK component of inhibitor of nuclear factor kappa B kinase complex 423669
gga HOXD4 homeobox D4 424139 IBA
gga EAF2 ELL associated factor 2 424243
gga CDC73 cell division cycle 73 424356
gga DR1 down-regulator of transcription 1 424496
gga MYSM1 Myb like, SWIRM and MPN domains 1 424671
gga JUN Jun proto-oncogene, AP-1 transcription factor subunit 424673 IBA
gga MIER1 MIER1 transcriptional regulator 424702
gga SAP130 Sin3A associated protein 130 424756
gga BCL6 B-cell CLL/lymphoma 6 424912 IBA
gga HOXB5 homeobox B5 425096 IEA
gga NGFR nerve growth factor receptor 425805
gga MED24 mediator complex subunit 24 426134
gga H2AFZ H2A histone family, member Z 426361
gga EED embryonic ectoderm development 426381
gga SUPT5H SPT5 homolog, DSIF elongation factor subunit 426493 IBA
gga HNRNPKL heterogeneous nuclear ribonucleoprotein K like 426516 IBA
gga SUB1 SUB1 regulator of transcription 427425
gga Pou5f3 POU domain class 5 transcription factor 3 427781 IBA
gga IL10 interleukin 10 428264
gga OLIG2 oligodendrocyte lineage transcription factor 2 428612 IBA
gga CYR61 cysteine rich angiogenic inducer 61 429089
gga HMX3 H6 family homeobox 3 429199 IBA
gga PLAG1 PLAG1 zinc finger 429484
gga IKZF5 IKAROS family zinc finger 5 430882 IBA
gga PSIP1 PC4 and SFRS1 interacting protein 1 431605 IBA
gga BMI1 BMI1 proto-oncogene, polycomb ring finger 493647
gga MAF MAF bZIP transcription factor 693248 IBA
gga TMEM173 transmembrane protein 173 768990
gga MAFG MAF bZIP transcription factor G 769355 IBA
gga SMARCB1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 769489 IBA
gga DMRT1 doublesex and mab-3 related transcription factor 1 769693 IBA
gga GTF2H5 general transcription factor IIH subunit 5 769754
gga SUMO2 small ubiquitin-like modifier 2 770125
gga EN1 engrailed homeobox 1 771008 IBA
gga HOXD9 homeobox D9 771214 IBA
gga HOXD10 homeobox D10 771246 IBA
gga SP8 Sp8 transcription factor 776034 IBA
gga HOXB6 homeobox B6 777548 IBA
gga NANOG Nanog homeobox 100272166 IBA
gga RAX retina and anterior neural fold homeobox 100677794 IBA
gga NKX1-2 NK1 homeobox 2 100857765 IBA
gga HOXA5 homeobox A5 100858404 IBA
gga MAX MYC associated factor X 100858676
gga PAX1 paired box 1 100859138 IBA
gga EN2 engrailed homeobox 2 100859435 IBA
gga HOXD1 homeobox D1 101750316 IBA
gga GATA1 GATA binding protein 1 (globin transcription factor 1) 107050548 IBA
gga SOX21 SRY-box 21 107051027 IEA
gga JUND JunD proto-oncogene, AP-1 transcription factor subunit 107055370 IBA


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