GO:0006351 transcription, DNA-templated

310 rno genes in this database. All gene

[QuickGO]

term: transcription, DNA-templated
goid: GO:0006351


Shaded genes do not have GeneChip data. The output was limited up to 10000.
Species Symbol Gene
coexpression
Locus
page
Full name* Entrez Gene ID Evidence*
rno Cebpa CCAAT/enhancer binding protein alpha 24252
rno Ets1 ETS proto-oncogene 1, transcription factor 24356
rno Jun Jun proto-oncogene, AP-1 transcription factor subunit 24516 IDA
rno Junb JunB proto-oncogene, AP-1 transcription factor subunit 24517
rno Jund JunD proto-oncogene, AP-1 transcription factor subunit 24518
rno Myc MYC proto-oncogene, bHLH transcription factor 24577 IDA
rno Sp1 Sp1 transcription factor 24790
rno Hnf1a HNF1 homeobox A 24817
rno Tp53 tumor protein p53 24842
rno Stat5a signal transducer and activator of transcription 5A 24918
rno Mitf melanocyte inducing transcription factor 25094 IDA
rno Stat1 signal transducer and activator of transcription 1 25124 ISO
rno Stat3 signal transducer and activator of transcription 3 25125
rno Stat5b signal transducer and activator of transcription 5B 25126
rno Cdkn2a cyclin-dependent kinase inhibitor 2A 25163
rno Lipe lipase E, hormone sensitive type 25330
rno Nfyb nuclear transcription factor Y subunit beta 25336
rno Nfyc nuclear transcription factor Y subunit gamma 25337
rno Arrb2 arrestin, beta 2 25388
rno Fosl2 FOS like 2, AP-1 transcription factor subunit 25446
rno Msx2 msh homeobox 2 25483
rno Npm1 nucleophosmin 1 25498
rno Eloa elongin A 25562
rno Ubtf upstream binding transcription factor 25574
rno Ahr aryl hydrocarbon receptor 25690
rno Sox10 SRY-box transcription factor 10 29361
rno Gcm1 glial cells missing transcription factor 1 29394
rno Nfya nuclear transcription factor Y subunit alpha 29508
rno Pdx1 pancreatic and duodenal homeobox 1 29535 IMP
rno Tcea2 transcription elongation factor A2 29575 IEA
rno Pou3f4 POU class 3 homeobox 4 29589
rno Mapk3 mitogen activated protein kinase 3 50689 ISO
rno Nr4a2 nuclear receptor subfamily 4, group A, member 2 54278 IEA,ISO,ISS
rno Scaf1 SR-related CTD-associated factor 1 56081
rno Ereg epiregulin 59325
rno Smn1 survival of motor neuron 1, telomeric 64301
rno Hif3a hypoxia inducible factor 3 subunit alpha 64345
rno Top1 DNA topoisomerase I 64550
rno Hist1h4b histone cluster 1 H4 family member B 64627
rno Adrm1 ADRM1 26S proteasome ubiquitin receptor 65138
rno Nkx6-1 NK6 homeobox 1 65193
rno Srebf1 sterol regulatory element binding transcription factor 1 78968
rno Hsf1 heat shock transcription factor 1 79245
rno Atf4 activating transcription factor 4 79255
rno Hnrnpd heterogeneous nuclear ribonucleoprotein D 79256
rno Creb1 cAMP responsive element binding protein 1 81646
rno Gtf2b general transcription factor IIB 81673
rno Gtf2f2 general transcription factor IIF subunit 2 81674
rno Elob elongin B 81807
rno Thra thyroid hormone receptor alpha 81812
rno Pax8 paired box 8 81819 ISO
rno Pias2 protein inhibitor of activated STAT, 2 83422 IEA,ISO
rno Tfam transcription factor A, mitochondrial 83474
rno Polr2f RNA polymerase II, I and III subunit F 83503
rno Polr1a RNA polymerase I subunit A 83581
rno Polr1b RNA polymerase I subunit B 83582
rno Hipk3 homeodomain interacting protein kinase 3 83617
rno Nr5a1 nuclear receptor subfamily 5, group A, member 1 83826
rno Gtf2a2 general transcription factor 2A subunit 2 83828
rno Gtf2a1 general transcription factor 2A subunit 1 83830
rno Ccnh cyclin H 84389
rno Mterf1 mitochondrial transcription termination factor 1 85261
rno C5ar1 complement C5a receptor 1 113959
rno Crcp CGRP receptor component 114205
rno Pou4f1 POU class 4 homeobox 1 114503
rno Klf4 Kruppel like factor 4 114505 ISO
rno Nfil3 nuclear factor, interleukin 3 regulated 114519
rno Ncoa6 nuclear receptor coactivator 6 116464
rno Polr2g RNA polymerase II subunit G 117017
rno Zbtb7a zinc finger and BTB domain containing 7a 117107 IEA,ISO
rno Tbp TATA box binding protein 117526
rno Prdm4 PR/SET domain 4 170820
rno Taf2 TATA-box binding protein associated factor 2 170844
rno Tcf3 transcription factor 3 171046
rno Gtf3c1 general transcription factor IIIC subunit 1 171063
rno Cdk7 cyclin-dependent kinase 7 171150
rno Taf9b TATA-box binding protein associated factor 9b 171152
rno Foxe3 forkhead box E3 171302
rno Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 171379
rno Cdk12 cyclin-dependent kinase 12 192350
rno Phrf1 PHD and ring finger domains 1 245925
rno Scaf8 SR-related CTD-associated factor 8 245926
rno Xab2 XPA binding protein 2 245976 ISO,ISS
rno Gtf3a general transcription factor III A 246299
rno Gtf2ird1 GTF2I repeat domain containing 1 246770
rno Lhx1 LIM homeobox 1 257634
rno LOC257642 rRNA promoter binding protein 257642
rno Mnat1 MNAT1 component of CDK activating kinase 266713
rno Prrx1 paired related homeobox 1 266813
rno Tefm transcription elongation factor, mitochondrial 287554
rno Supt4h1 SPT4 homolog, DSIF elongation factor subunit 287608
rno Hoxb9 homeo box B9 287647 IEA
rno Cavin1 caveolae associated protein 1 287710
rno Ddx5 DEAD-box helicase 5 287765
rno RGD1304870 similar to Tceb2 protein 287912
rno Hoxd3 homeo box D3 288152 ISO
rno Uspl1 ubiquitin specific peptidase like 1 288447
rno Taf6 TATA-box binding protein associated factor 6 288533
rno Polr2j RNA polymerase II subunit J 288588
rno Gtf2h3 general transcription factor IIH subunit 3 288651
rno Tfb2m transcription factor B2, mitochondrial 289307
rno Polr2b RNA polymerase II subunit B 289561
rno Xbp1 X-box binding protein 1 289754
rno Dr1 down-regulator of transcription 1 289881
rno Gcm2 glial cells missing transcription factor 2 291047
rno Hist1h4m histone cluster 1, H4m 291152
rno Ppargc1b PPARG coactivator 1 beta 291567
rno Tcof1 treacle ribosome biogenesis factor 1 291571
rno Ercc3 ERCC excision repair 3, TFIIH core complex helicase subunit 291703
rno Taf4b TATA-box binding protein associated factor 4b 291773
rno Polr2i RNA polymerase II subunit I 292778
rno Pih1d1 PIH1 domain containing 1 292898
rno Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component 293184
rno Taf10 TATA-box binding protein associated factor 10 293345
rno Drap1 Dr1 associated protein 1 293674
rno Flna filamin A 293860
rno Taf5 TATA-box binding protein associated factor 5 294018
rno Gtf2h4 general transcription factor 2H subunit 4 294236
rno Foxo3 forkhead box O3 294515
rno Pou5f1 POU class 5 homeobox 1 294562
rno Bdp1 B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB 294687
rno Gtf2h2 general transcription factor IIH subunit 2 294693
rno Gpbp1 GC-rich promoter binding protein 1 294734 IEA
rno Hist2h4 histone cluster 2, H4 295277
rno Slc39a8 solute carrier family 39 member 8 295455 ISO
rno Ehf ets homologous factor 295965
rno Ino80 INO80 complex ATPase subunit 296084 IEA
rno Ell3 elongation factor for RNA polymerase II 3 296102
rno Plagl2 PLAG1 like zinc finger 2 296281 IEA
rno Cbfa2t2 CBFA2/RUNX1 partner transcriptional co-repressor 2 296293 IEA
rno Hoxa9 homeobox A9 297099 IEA
rno Plag1 PLAG1 zinc finger 297804 IEA
rno Creb3 cAMP responsive element binding protein 3 298400 ISO
rno Tcea3 transcription elongation factor A3 298559 IEA
rno Ssu72 SSU72 homolog, RNA polymerase II CTD phosphatase 298681
rno Nkx2-8 NK2 homeobox 8 299061 ISO
rno Brf1 BRF1, RNA polymerase III transcription initiation factor subunit 299347
rno Polrmt RNA polymerase mitochondrial 299604
rno Mars1 methionyl-tRNA synthetase 1 299851
rno Eef1d eukaryotic translation elongation factor 1 delta 300033
rno Polr3h RNA polymerase III subunit H 300088
rno Hinfp histone H4 transcription factor 300665 ISO
rno Leo1 LEO1 homolog, Paf1/RNA polymerase II complex component 300837
rno Topaz1 testis and ovary specific PAZ domain containing 1 301075
rno Polr1c RNA polymerase I and III subunit C 301246
rno Rbmx RNA binding motif protein, X-linked 302855
rno Supt6h SPT6 homolog, histone chaperone and transcription elongation factor 303281
rno Sirt7 sirtuin 7 303745
rno Mrpl12 mitochondrial ribosomal protein L12 303746
rno Gtf2e1 general transcription factor IIE subunit 1 303918
rno Baz2a bromodomain adjacent to zinc finger domain, 2A 304601
rno Rrn3 RRN3 homolog, RNA polymerase I transcription factor 304714
rno Ccnt2 cyclin T2 304758 IEA
rno Elf3 E74 like ETS transcription factor 3 304815
rno Cdc73 cell division cycle 73 304832
rno Dhx9 DExH-box helicase 9 304859
rno Rpap2 RNA polymerase II associated protein 2 305120
rno Ang angiogenin 305843
rno Supt16h SPT16 homolog, facilitates chromatin remodeling subunit 305851
rno Polr3d RNA polymerase III subunit D 306012
rno Med4 mediator complex subunit 4 306030
rno Ercc6 ERCC excision repair 6, chromatin remodeling factor 306274
rno Ell elongation factor for RNA polymerase II 306347
rno Gtf2e2 general transcription factor IIE subunit 2 306516
rno Brf2 BRF2, RNA polymerase III transcription initiation factor subunit 306542
rno Thap1 THAP domain containing 1 306547 ISO
rno Col4a2 collagen type IV alpha 2 chain 306628 ISO
rno Ice1 interactor of little elongation complex ELL subunit 1 306665
rno Cdk13 cyclin-dependent kinase 13 306998
rno Ablim3 actin binding LIM protein family, member 3 307395 IEA
rno Taf7 TATA-box binding protein associated factor 7 307485
rno Smarca5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 307766
rno Rbmxl1 RBMX like 1 307779
rno Nfat5 nuclear factor of activated T-cells 5 307820
rno Tfb1m transcription factor B1, mitochondrial 308140
rno Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit 308415
rno Supt5h SPT5 homolog, DSIF elongation factor subunit 308472
rno Rsf1 remodeling and spacing factor 1 308839
rno Rela RELA proto-oncogene, NF-kB subunit 309165 ISO
rno Taf6l TATA-box binding protein associated factor 6 like 309194
rno Twnk twinkle mtDNA helicase 309441
rno Ldb1 LIM domain binding 1 309447
rno Taf11 TATA-box binding protein associated factor 11 309638
rno Ell2 elongation factor for RNA polymerase II 2 309918
rno Mef2a myocyte enhancer factor 2a 309957 IEA,ISO
rno Ap3b1 adaptor related protein complex 3 subunit beta 1 309969
rno Mlf1 myeloid leukemia factor 1 310483 ISO
rno Polr3c RNA polymerase III subunit C 310685 IEA
rno Taf13 TATA-box binding protein associated factor 13 310784
rno Nmi N-myc (and STAT) interactor 311021
rno Rpap1 RNA polymerase II associated protein 1 311338
rno Zc3h8 zinc finger CCCH type containing 8 311414
rno Polr3f RNA polymerase III subunit F 311487
rno Asxl1 ASXL transcriptional regulator 1 311553 IEA
rno Polr1e RNA polymerase I subunit E 313245
rno Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor 313507
rno Gpbp1l1 GC-rich promoter binding protein 1-like 1 313519 IEA
rno Ski SKI proto-oncogene 313757 IEA
rno Gtf3c2 general transcription factor IIIC subunit 2 313914
rno Snapc1 small nuclear RNA activating complex, polypeptide 1 314228
rno Zbtb1 zinc finger and BTB domain containing 1 314246
rno Fos Fos proto-oncogene, AP-1 transcription factor subunit 314322
rno Ddx17 DEAD-box helicase 17 315133
rno Ccnt1 cyclin T1 315291 IEA
rno Tfcp2 transcription factor CP2 315309
rno Setd2 SET domain containing 2, histone lysine methyltransferase 316013
rno Gtf2f1 general transcription factor IIF subunit 1 316123
rno Taf8 TATA-box binding protein associated factor 8 316216
rno Gtf2a1l general transcription factor 2A subunit 1 like 316711
rno Gtf3c3 general transcription factor IIIC subunit 3 316810
rno Taf1 TATA-box binding protein associated factor 1 317256
rno Ddx21 DExD-box helicase 21 317399
rno Gtf2i general transcription factor II I 353256
rno Ppp1r1b protein phosphatase 1, regulatory (inhibitor) subunit 1B 360616 ISO
rno Taf1a TATA-box binding protein associated factor, RNA polymerase I subunit A 360893
rno Ablim2 actin binding LIM protein family, member 2 360958 IEA
rno Polr3a RNA polymerase III subunit A 361102 IEA
rno Tfdp1 transcription factor Dp-1 361178
rno Pcid2 PCI domain containing 2 361182
rno Spin1 spindlin 1 361217
rno Polr2c RNA polymerase II subunit C 361365
rno Taf1c TATA-box binding protein associated factor, RNA polymerase 1 subunit C 361420
rno Cbfa2t3 CBFA2/RUNX1 partner transcriptional co-repressor 3 361431 IEA
rno Paf1 PAF1 homolog, Paf1/RNA polymerase II complex component 361531
rno Gtf2h1 general transcription factor IIH subunit 1 361580
rno Pcf11 PCF11 cleavage and polyadenylation factor subunit 361605
rno Polr3e RNA polymerase III subunit E 361640 IEA
rno Rfx3 regulatory factor X3 361746 ISO
rno Polr1h RNA polymerase I subunit H 361784
rno Smarcb1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 361825
rno Gtf3c6 general transcription factor 3C subunit 6 361858
rno Snapc4 small nuclear RNA activating complex, polypeptide 4 362088
rno Gtf3c5 general transcription factor IIIC subunit 5 362095
rno Setx senataxin 362096
rno Fubp3 far upstream element binding protein 3 362106 ISO
rno Xrn2 5'-3' exoribonuclease 2 362229
rno Dido1 death inducer-obliterator 1 362286 IEA
rno Tcea1 transcription elongation factor A1 362479 IEA
rno Runx1t1 RUNX1 partner transcriptional co-repressor 1 362489 IEA
rno Snapc3 small nuclear RNA activating complex, polypeptide 3 362537
rno Mtf1 metal-regulatory transcription factor 1 362591 ISO
rno Etv1 ETS variant transcription factor 1 362733
rno Lin52 lin-52 DREAM MuvB core complex component 362763 IEA
rno Ncapg2 non-SMC condensin II complex, subunit G2 362798
rno Polr3b RNA polymerase III subunit B 362858 IEA
rno Wdr61 WD repeat domain 61 363064
rno Phf3 PHD finger protein 3 363210 IEA
rno Mterf4 mitochondrial transcription termination factor 4 363289
rno Taf7l TATA-box binding protein associated factor 7-like 363493
rno Cnot8 CCR4-NOT transcription complex, subunit 8 363603 IEA
rno Polr2a RNA polymerase II subunit A 363633
rno Hira histone cell cycle regulator 363849 IEA
rno Prmt5 protein arginine methyltransferase 5 364382
rno Hist1h2ao histone cluster 1, H2ao 364723
rno Polr2d RNA polymerase II subunit D 364834
rno Lcor ligand dependent nuclear receptor corepressor 365462
rno RGD1563330 similar to elongin B isoform b 365928
rno Rtf1 Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) 366169
rno Polr3k RNA polymerase III subunit K 366277
rno Tceanc2 transcription elongation factor A N-terminal and central domain containing 2 366431 IEA
rno Mterf2 mitochondrial transcription termination factor 2 366856
rno Tceanc transcription elongation factor A N-terminal and central domain containing 367782 IEA
rno Hoxc9 homeobox C9 368178 IEA
rno Taf9 TATA-box binding protein associated factor 9 373541
rno E2f1 E2F transcription factor 1 399489 ISO,ISS
rno Med1 mediator complex subunit 1 497991
rno Polr2h RNA polymerase II, I and III subunit H 498109
rno LOC498453 similar to transcription elongation factor A 1 isoform 2 498453 IEA
rno Fam170a family with sequence similarity 170, member A 498864
rno Celf3 CUGBP, Elav-like family member 3 499669
rno Ttf1 transcription termination factor 1 499766
rno Gtf2h5 general transcription factor IIH subunit 5 502227
rno Polr2l RNA polymerase II, I and III subunit L 502374
rno Npm3 nucleophosmin/nucleoplasmin, 3 502389
rno RGD1563055 similar to transcription elongation factor B (SIII), polypeptide 2 502742
rno Hist2h4a histone cluster 2 H4 family member A 502913
rno Med24 mediator complex subunit 24 619436
rno Tbpl2 TATA box binding protein-like 2 680050
rno Polr1g RNA polymerase I subunit G 680493
rno Bcl3 BCL3, transcription coactivator 680611 ISO
rno Glis3 GLIS family zinc finger 3 680671
rno Scx scleraxis bHLH transcription factor 680712 ISO
rno Taf4 TATA-box binding protein associated factor 4 682097 ISO
rno Taf12 TATA-box binding protein associated factor 12 682902
rno Eny2 ENY2, transcription and export complex 2 subunit 685258
rno Polr3g RNA polymerase III subunit G 685465
rno Gtf3c4 general transcription factor IIIC subunit 4 685539
rno Supt3h SPT3 homolog, SAGA and STAGA complex component 685697
rno Ppp1r13l protein phosphatase 1, regulatory subunit 13 like 686781 IEA
rno Hoxd9 homeo box D9 688999 IEA
rno Tbpl1 TATA-box binding protein like 1 689030
rno LOC689396 similar to RNA polymerase II elongation factor ELL2 689396
rno Lin9 lin-9 DREAM MuvB core complex component 689523 IEA
rno Polr3gl RNA polymerase III subunit GL 690254
rno Taf1b TATA-box binding protein associated factor, RNA polymerase I subunit B 690450
rno Scai suppressor of cancer cell invasion 690538 IEA
rno Polr2e RNA polymerase II, I and III subunit E 690966 IEA
rno Elof1 elongation factor 1 homolog 691193
rno Ice2 interactor of little elongation complex ELL subunit 2 691379
rno Slc25a33 solute carrier family 25 member 33 691431
rno Snapc5 small nuclear RNA activating complex, polypeptide 5 691501
rno Chd5 chromodomain helicase DNA binding protein 5 691589
rno Maz MYC associated zinc finger protein 691842
rno Fosb FosB proto-oncogene, AP-1 transcription factor subunit 100360880
rno Polr2k RNA polymerase II, I and III subunit K 100361574
rno LOC100909963 transcription elongation factor B polypeptide 2-like 100909963
rno H4c3 H4 clustered histone 3 100912489
rno Znf768 zinc finger protein 768 102553763
rno LOC103691042 transcription elongation factor B polypeptide 2 pseudogene 103691042
rno LOC103691783 transcription elongation factor B polypeptide 2 pseudogene 103691783


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