GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding

320 cel genes in this database. All gene

[QuickGO]

term: RNA polymerase II cis-regulatory region sequence-specific DNA binding
goid: GO:0000978

Shaded genes do not have GeneChip data. The output was limited up to 10000.
Species Symbol Gene
coexpression		 Locus
page 		Full name* Entrez Gene ID Evidence*
cel snpc-3.2 Small nuclear RNA-activating complex polypeptide 3 171615 IBA
cel ztf-3 Zinc finger putative Transcription Factor family 171617 IBA
cel zfh-2 Zinc Finger and Homeobox 171670 IBA
cel pop-1 Protein pop-1 171849 IBA
cel ztf-23 Zinc finger putative Transcription Factor family 171880 IBA
cel nhr-64 Nuclear hormone receptor family member nhr-64 171884 IBA
cel zip-4 BZIP domain-containing protein 171900 IBA
cel sem-2 Transcription factor sem-2 172162 IBA
cel rnt-1 Runt domain-containing protein 172243 IBA
cel nhr-2 Nuclear hormone receptor family member nhr-2 172251 IBA
cel cebp-2 CCAAT/enhancer-binding protein 2 172319 IBA
cel let-381 Fork-head domain-containing protein 172331 IBA
cel klu-2 KLUmpfuss related 172339 IBA
cel sem-4 Uncharacterized protein 172435 IBA
cel hlh-2 BHLH domain-containing protein 172458 IBA
cel nhr-23 Nuclear hormone receptor family member nhr-23 172460 IBA
cel unc-120 MADS-box domain-containing protein 172636 IBA
cel ceh-6 Homeobox protein ceh-6 172640 IBA
cel mef-2 MADS-box domain-containing protein 172732 IBA
cel irx-1 Putative iroquois-class homeodomain protein irx-1 172789 IBA
cel nhr-49 NR LBD domain-containing protein;Nuclear hormone receptor family member nhr-49 172839 IBA
cel nhr-69 Nuclear hormone receptor family member nhr-69 172840 IBA
cel lsl-1 LSY-2-Like 172844 IBA
cel aha-1 Aryl hydrocarbon receptor nuclear translocator homolog 172889 IBA
cel sptf-1 C2H2-type domain-containing protein 172909 IBA
cel blmp-1 B lymphocyte-induced maturation protein 1 homolog 172917 IBA
cel daf-16 Fork-head domain-containing protein;Forkhead box protein O 172981 IBA
cel hsf-1 HSF_DOMAIN domain-containing protein 173078 IBA
cel ccct-1 Coiled-coil and C2 domain-containing protein 1-like 173244 IBA
cel hinf-1 HIstone Nuclear Factor p (P) homolog 173348 IBA
cel ces-2 Cell death specification protein 2 173365 IBA
cel klu-1 KLUmpfuss related 173366 IBA
cel nfyb-1 Nuclear transcription factor Y subunit nfyb-1 173435 IBA
cel mab-9 T-box protein 12 173441 IBA
cel duxl-1 DUX (vertebrate dual homeobox) Like 173537 IBA
cel ceh-83 Homeobox domain-containing protein 173541 IBA
cel sea-1 T-box transcription factor 18 173710 IBA
cel sea-2 Signal element on autosome protein 2 173738 IBA
cel lin-31 Protein lin-31 173740 IBA
cel hlh-1 Myoblast determination protein 1 homolog 173788 IBA
cel ZK546.5 C2H2-type domain-containing protein 173850 IBA
cel hlh-26 Helix-loop-helix protein 26 173939 IBA
cel egl-44 TEA domain-containing protein;Transcription enhancer factor-like protein egl-44 174005 IBA
cel fkh-8 Fork-head domain-containing protein 174026 IBA
cel ceh-38 Homeobox protein ceh-38;One cut domain family member 174136 IBA
cel nfi-1 CTF/NF-I domain-containing protein 174225 IBA
cel ztf-17 Zinc finger transcription factor family protein 17 174269 IBA
cel efl-3 E2F-like (mammalian transcription factor) 174341 IBA
cel jun-1 BZIP domain-containing protein;Transcription factor jun-1 174452 IBA
cel zfp-2 Zinc finger protein zfp-2 174505 IBA
cel mab-3 Protein male abnormal 3 174533 IBA,IDA
cel egl-43 Uncharacterized protein 174552 IBA
cel daf-19 RFX-like transcription factor daf-19;RFX-type winged-helix domain-containing protein 174577 IBA
cel ref-1 REgulator of Fusion 174585 IBA
cel unc-130 Fork-head domain-containing protein 174721 IBA
cel mdt-8 Mediator of RNA polymerase II transcription subunit 8 174763 IBA
cel lin-29 Uncharacterized protein 174830 IBA
cel ceh-100 uncharacterized protein 174894 IBA
cel F58G1.2 Uncharacterized protein 174931 IBA
cel daf-5 c-SKI_SMAD_bind domain-containing protein 175054 IBA
cel nurf-1 Bromo domain-containing protein;DDT domain-containing protein;NURF (nucleosome remodeling factor) complex homolog;Nucleosome-remodeling factor subunit NURF301-like 175098 IBA
cel cog-1 Homeobox domain-containing protein 175149 IBA
cel mxl-2 BHLH domain-containing protein 175184 IBA
cel dac-1 Ski_Sno domain-containing protein 175238 IBA
cel zip-2 Transcription factor zip-2 175240 IBA
cel klf-1 Kruppel-Like Factor (zinc finger protein) 175404 IBA
cel nhr-6 Nuclear hormone receptor family member nhr-6 175462 IBA
cel lin-48 Uncharacterized protein 175485 IBA
cel gmeb-3 SAND domain-containing protein 175487 IEA
cel ceh-43 Homeobox domain-containing protein;Homeobox protein ceh-43 175581 IBA
cel atf-7 BZIP domain-containing protein 175587 IBA
cel tbx-2 T-box protein 2 175698 IBA
cel sma-4 Dwarfin sma-4;MH2 domain-containing protein 175815 IBA
cel ZK328.6 putative F-box protein ZK328.6 175854 IBA
cel zip-8 bZIP transcription factor 8 175924 IBA
cel sma-3 Dwarfin sma-3 175955 IBA
cel nhr-10 Nuclear hormone receptor family member nhr-10 175993 IBA
cel mml-1 BHLH domain-containing protein;Protein WBSCR14 homolog 176050 IBA
cel lin-39 Homeobox protein lin-39 176068 IBA
cel ceh-13 Homeobox protein ceh-13 176069 IBA
cel mab-5 Homeobox protein mab-5 176091 IBA
cel egl-5 Homeobox protein egl-5 176093 IBA
cel ceh-23 Homeobox protein ceh-23 176096 IBA
cel pros-1 Homeobox protein prospero homolog 1 176137 IBA
cel unc-86 Transcription factor unc-86 176157 IBA
cel sma-2 Dwarfin sma-2;MH2 domain-containing protein 176229 IBA
cel hlh-11 Helix-loop-helix protein 11 176360 IBA
cel tbx-9 T-box transcription factor tbx-9 176449 IBA
cel tbx-8 T-box transcription factor tbx-8 176450 IBA
cel vab-7 Homeobox protein vab-7 176521 IBA
cel tra-1 Sex-determining transformer protein 1 176548 IBA,IDA
cel tbx-34 Putative T-box protein 34 176549 IBA
cel sbp-1 BHLH domain-containing protein 176574 IBA
cel crh-1 BZIP domain-containing protein 176597 IBA
cel Y56A3A.28 C2H2-type domain-containing protein 176632 IBA
cel php-3 Homeobox domain-containing protein 176640 IBA
cel egl-18 GATA-type domain-containing protein 176992 IBA
cel elt-6 GATA-type domain-containing protein 176993 IBA
cel ngn-1 BHLH domain-containing protein 177045 IBA
cel lin-22 BHLH domain-containing protein 177082 IBA
cel zip-11 BZIP domain-containing protein 177099 IBA
cel zag-1 Zinc finger E-box-binding homeobox protein zag-1 177144 IBA
cel hlh-30 BHLH domain-containing protein 177157 IBA
cel eor-1 Uncharacterized protein 177249 IBA
cel pes-1 Fork-head domain-containing protein 177267 IBA
cel snpc-3.1 Small nuclear RNA-activating complex polypeptide 3 177331 IBA
cel fkh-7 Fork-head domain-containing protein 177340 IBA
cel skn-1 BZIP domain-containing protein;Protein skinhead-1 177343 IBA
cel lag-1 Lin-12 And Glp-1 phenotype 177373 IBA,IEA
cel nhr-8 Nuclear hormone receptor family member nhr-8 177551 IBA
cel zgpa-1 Zinc finger CCCH-type with G patch domain-containing protein 177568 IBA
cel elt-1 Transcription factor elt-1 177794 IBA
cel nhr-34 Nuclear hormone receptor family member nhr-34 177800 IBA
cel nhr-100 Nuclear hormone receptor family member nhr-100 177806 IBA
cel egl-38 Paired domain-containing protein 177876 IBA
cel daf-14 MH2 domain-containing protein 177908 IBA
cel Y5F2A.4 Uncharacterized protein 178004 IBA
cel nhr-67 Nuclear hormone receptor family member nhr-67 178024 IBA
cel nhr-7 Nuclear hormone receptor family member nhr-7 178035 IBA
cel unc-30 Homeobox domain-containing protein;Homeobox protein unc-30 178265 IBA
cel dmd-6 DM domain-containing protein 178392 IBA
cel zip-7 BZIP domain-containing protein 178459 IBA
cel sta-1 Signal transducer and activator of transcription 1 178465 IBA
cel ceh-88 Homeobox domain-containing protein 178514 IBA
cel nhr-114 NR LBD domain-containing protein 178821 IBA
cel unc-62 Homeobox domain-containing protein;Homeobox protein unc-62 178845 IBA
cel ceh-34 Homeobox protein ceh-34 178919 IBA
cel nhr-47 Nuclear hormone receptor family member nhr-47 178933 IBA
cel fos-1 Transcription factor fos-1 178987 IBA
cel atf-8 BZIP domain-containing protein 178998 IBA
cel ceh-49 One cut domain family member 179001 IBA
cel dmd-7 DM domain-containing protein 179012 IBA
cel bcl-11 mammalian BCL (B cell lymphoma) gene homologs 179019 IBA
cel egl-46 C2H2-type domain-containing protein 179058 IBA
cel ceh-22 Homeobox domain-containing protein;Homeobox protein ceh-22 179485 IBA
cel nhr-101 Nuclear Hormone Receptor family 179588 IBA
cel nhr-68 NR LBD domain-containing protein 179589 IBA
cel ceh-32 Homeobox protein ceh-32 179603 IBA
cel ceh-24 Homeobox protein ceh-24 179877 IBA
cel nhr-60 Nuclear hormone receptor family member nhr-60 180059 IBA
cel nhr-116 Nuclear Hormone Receptor family 180129 IBA
cel efl-1 E2F_TDP domain-containing protein 180133 IBA
cel ceh-51 Homeobox domain-containing protein 180233 IBA
cel ttx-1 Homeobox domain-containing protein 180313 IBA
cel pha-4 Defective pharyngeal development protein 4 180357 IBA
cel ceh-93 Homeobox domain-containing protein 180394 IBA
cel dve-1 Homeobox domain-containing protein 180398 IBA
cel B0310.2 Putative zinc finger protein B0310.2 180403 IBA
cel cebp-1 C/EBP (CCAAT/enhancer-binding protein) homolog 180481 IBA
cel ceh-41 Homeobox domain-containing protein 180503 IBA
cel ceh-21 Homeobox protein ceh-21 180504 IBA
cel ceh-39 Homeobox protein ceh-39 180505 IBA
cel lsy-2 Uncharacterized protein 180522 IBA
cel peb-1 FLYWCH-type domain-containing protein 180532 IDA
cel nhr-40 Nuclear hormone receptor family member nhr-40 180560 IBA
cel tra-4 TRAnsformer: XX animals transformed into males 180575 IBA
cel K10B3.5 Uncharacterized protein 180599 IBA
cel fax-1 Nuclear receptor domain-containing protein 180609 IBA
cel fkh-2 Fork-head domain-containing protein 180663 IBA
cel fkh-9 Fork-head domain-containing protein 180670 IBA
cel ceh-18 Homeobox protein ceh-18;uncharacterized protein 180671 IBA
cel nhr-35 Nuclear hormone receptor family member nhr-35 180725 IBA
cel egl-13 HMG box domain-containing protein;Transcription factor egl-13 180833 IBA
cel mdl-1 BHLH domain-containing protein 180942 IBA
cel sox-2 HMG box domain-containing protein;Transcription factor sox-2 181002 IBA
cel F26A10.2 Uncharacterized protein 181025 IBA
cel nhr-14 Nuclear hormone receptor family member nhr-14 181102 IBA
cel utx-1 uncharacterized protein 181110 IBA
cel jmjd-3.1 JmjC domain-containing protein;Lysine-specific demethylase jmjd-3.1 181111 IBA
cel sex-1 Steroid hormone receptor family member cnr14 181231 IBA
cel elt-4 GATA-type domain-containing protein 181249 IBA
cel elt-2 Transcription factor elt-2 181250 IBA
cel vab-3 Homeobox domain-containing protein 181251 IBA
cel daf-12 Nuclear hormone receptor family member daf-12 181263 IBA
cel nfya-1 Nuclear transcription factor Y subunit nfya-1 181368 IBA
cel atf-6 BZIP domain-containing protein 181405 IBA
cel nhr-25 Nuclear hormone receptor family member nhr-25 181432 IBA
cel fkh-3 Fork-head domain-containing protein 181465 IBA
cel fkh-4 Fork-head domain-containing protein 181466 IBA
cel elt-3 GATA-type domain-containing protein 181503 IBA
cel ceh-36 Homeobox protein ceh-36 181529 IBA
cel ceh-37 Homeobox domain-containing protein;Homeobox protein ceh-37 181530 IBA
cel jmjd-3.2 JmjC domain-containing protein 181543 IBA
cel nhr-3 Nuclear hormone receptor family member nhr-3 181551 IBA
cel unc-3 Transcription factor unc-3 181573 IBA
cel egrh-1 EGR (Early Growth factor Response factor) Homolog 181580 IBA
cel dmd-4 DM domain-containing protein 181581 IBA
cel pag-3 Uncharacterized protein 181588 IBA
cel nhr-91 Nuclear hormone receptor family member nhr-91 181621 IBA
cel psa-3 Meis_PKNOX_N domain-containing protein 181631 IBA
cel nhr-48 Nuclear hormone receptor family member nhr-48;Nuclear receptor domain-containing protein 181661 IBA
cel gmeb-2 SAND domain-containing protein 181676 IEA
cel nhr-1 Nuclear hormone receptor family member nhr-1;Nuclear receptor domain-containing protein 181783 IBA
cel fkh-6 Fork-head domain-containing protein 181907 IBA
cel gmeb-1 SAND domain-containing protein 182061 IEA
cel nhr-147 Nuclear Hormone Receptor family 182170 IBA
cel nhr-148 Nuclear Hormone Receptor family 182172 IBA
cel nhr-149 NR LBD domain-containing protein 182174 IBA
cel nhr-76 Nuclear Hormone Receptor family 182276 IBA
cel npax-4 Paired domain-containing protein 182466 IBA
cel mnm-2 Zinc finger protein mnm-2 182489 IBA
cel nhr-152 Nuclear Hormone Receptor family 182533 IBA
cel sox-4 HMG box domain-containing protein 182547 IBA
cel nhr-153 Nuclear hormone receptor family member nhr-153 182564 IBA
cel nhr-154 Nuclear hormone receptor family member nhr-154 182565 IBA
cel nhr-136 Nuclear hormone receptor family member nhr-136 182566 IBA
cel hlh-25 BHLH domain-containing protein 182717 IBA
cel hlh-27 BHLH domain-containing protein 182719 IBA
cel ceh-48 One cut domain family member 182756 IBA
cel tbx-38 Putative T-box protein 38 182861 IBA
cel fkh-10 Fork-head domain-containing protein 182874 IBA
cel nhr-120 Nuclear Hormone Receptor family 182882 IBA
cel spe-44 SAND domain-containing protein 182915 IEA
cel nhr-258 Nuclear Hormone Receptor family 182927 IBA
cel dmd-10 DM domain-containing protein 183202 IBA
cel cnd-1 Neurogenic differentiation factor 1 183212 IBA
cel tbx-31 Putative T-box protein 31 183272 IBA
cel hlh-15 BHLH domain-containing protein 183427 IBA
cel ref-2 REgulator of Fusion 183539 IBA
cel nhr-129 Nuclear Hormone Receptor family 183635 IBA
cel che-1 Transcription factor che-1 183847 IBA
cel nhr-173 Nuclear Hormone Receptor family 183862 IBA
cel nhr-137 NR LBD domain-containing protein 183865 IBA
cel hlh-16 BHLH domain-containing protein 183973 IBA
cel dmd-5 DM domain-containing protein 184287 IBA
cel nhr-263 Nuclear Hormone Receptor family 184318 IBA
cel sdz-12 Zinc finger protein sdz-12 184388 IBA
cel nhr-118 Nuclear Hormone Receptor family 184398 IBA
cel ztf-2 C2H2-type domain-containing protein 184429 IBA
cel npax-1 Paired domain-containing protein 184779 IBA
cel ceh-60 Homeobox domain-containing protein 184803 IBA
cel nhr-141 Nuclear Hormone Receptor family 184926 IBA
cel pax-3 PAX (Paired box) transcription factor 185022 IBA
cel hlh-28 BHLH domain-containing protein 185134 IBA
cel hlh-29 BHLH domain-containing protein 185136 IBA
cel tab-1 Homeobox domain-containing protein 185156 IBA
cel ceh-87 Homeobox domain-containing protein 185241 IBA
cel hlh-17 BHLH domain-containing protein 185460 IBA
cel sox-3 HMG box domain-containing protein 185534 IBA
cel tbx-11 Putative T-box protein 11 185575 IBA
cel nhr-111 Nuclear hormone receptor family member nhr-111 185757 IBA
cel ceh-27 Homeobox domain-containing protein 185853 IBA
cel npax-2 Paired domain-containing protein 185967 IBA
cel klf-2 Kruppel-Like Factor (zinc finger protein) 186179 IBA
cel mls-1 T-box transcription factor mls-1 186741 IBA
cel pax-2 Paired domain-containing protein 187062 IBA
cel pax-1 Paired domain-containing protein 187105 IBA
cel pha-2 Homeobox domain-containing protein 187454 IBA
cel nhr-204 Nuclear Hormone Receptor family 187519 IBA
cel daf-8 Dwarfin sma 187612 IBA
cel nhr-206 Nuclear Hormone Receptor family 187660 IBA
cel nhr-207 Nuclear Hormone Receptor family 187661 IBA
cel nhr-208 Nuclear Hormone Receptor family 187662 IBA
cel nhr-209 Nuclear Hormone Receptor family 187663 IBA
cel zip-6 BZIP domain-containing protein 187691 IBA
cel npax-3 Paired domain-containing protein 187848 IBA
cel ceh-99 Homeobox domain-containing protein 188680 IBA
cel sptf-2 SP (Specificity Protein) Transcription Factor 188733 IBA
cel dmd-8 DM (Doublesex/MAB-3) Domain family 188771 IBA
cel nhr-221 Nuclear Hormone Receptor family 188826 IBA
cel tbx-41 Putative T-box protein 41 188917 IBA
cel sknr-1 BZIP domain-containing protein 189139 IBA
cel nhr-236 Nuclear receptor domain-containing protein 189677 IBA
cel sptf-3 SP (Specificity Protein) Transcription Factor 189783 IBA
cel dmd-3 Doublesex-and mab-3-related transcription factor dmd-3 189878 IBA
cel tbx-37 Putative T-box protein 37 189977 IBA
cel grh-1 CP2 domain-containing protein 190048 IBA
cel eyg-1 uncharacterized protein 190204 IBA
cel nhr-239 Nuclear receptor domain-containing protein 190264 IBA
cel egrh-2 EGR (Early Growth factor Response factor) Homolog 190308 IBA
cel znf-782 ZiNc Finger protein homolog 190310 IBA
cel tbx-30 Putative T-box protein 30/42 190419 IBA
cel tbx-33 Putative T-box protein 33 190493 IBA
cel dmd-9 DM domain-containing protein 190512 IBA
cel tbx-39 Putative T-box protein 39 190678 IBA
cel tbx-40 Putative T-box protein 40 190679 IBA
cel nhr-277 Nuclear Hormone Receptor family 190799 IBA
cel nhr-41 Nuclear Hormone Receptor family 190865 IBA
cel nhr-229 Nuclear receptor domain-containing protein 191001 IBA
cel tbx-35 Putative T-box protein 35 191239 IBA
cel tbx-32 Putative T-box protein 32 191303 IBA
cel ehn-3 Zinc finger protein ehn-3 191363 IBA
cel tbx-36 Putative T-box protein 36 191435 IBA
cel ceh-1 Homeobox protein ceh-1 191614 IBA
cel ceh-2 Homeobox protein ceh-2 191615 IBA
cel ceh-5 Homeobox protein ceh-5 191616 IBA
cel ceh-16 Homeobox protein engrailed-like ceh-16 191618 IBA
cel ceh-28 Homeobox domain-containing protein 191619 IBA
cel ceh-33 Homeobox protein ceh-33 191622 IBA
cel unc-39 Homeobox protein unc-39 191623 IBA
cel ceh-40 Homeobox protein ceh-40 191624 IBA
cel end-3 GATA-type domain-containing protein 191631 IBA
cel lin-32 Protein lin-32 191703 IBA
cel med-1 GATA-type domain-containing protein 191705 IBA
cel med-2 GATA-type domain-containing protein 191706 IBA
cel klf-3 Kruppel-Like Factor (zinc finger protein) 191713 IBA
cel nhr-17 Nuclear Hormone Receptor family 191719 IBA
cel nhr-38 Nuclear receptor domain-containing protein 191720 IBA
cel nhr-85 Nuclear hormone receptor family member nhr-85 191732 IBA
cel snpc-3.4 Small nuclear RNA-activating complex polypeptide 3 192054 IBA
cel unc-55 Nuclear hormone receptor unc-55 192082 IBA
cel Y37F4.6 C2H2-type domain-containing protein 259399 IBA
cel crh-2 BZIP domain-containing protein 259434
cel tbx-7 Putative T-box protein 7 260030 IBA
cel let-607 BZIP domain-containing protein 266837 IBA
cel mab-23 DM domain-containing protein 266926 IBA
cel ceh-9 Homeobox protein ceh-9 267057 IBA
cel nhr-168 Nuclear Hormone Receptor family 353455 IBA
cel fezf-1 FEZ Family zinc finger protein 3564888 IBA
cel hlh-32 BHLH domain-containing protein 3565279 IBA
cel sta-2 Signal transducer and activator of transcription b 3565291 IBA
cel ceh-20 Homeobox protein ceh-20 3565545 IBA
cel hlh-31 BHLH domain-containing protein 3565632 IBA
cel znf-236 C2H2-type domain-containing protein 3565634 IBA
cel nfya-2 Nuclear transcription factor Y subunit nfya-2 3565955 IBA
cel tbx-43 T BoX family 4363053 IBA
cel maf-1 bZIP_Maf domain-containing protein 6418592 IBA
cel nhr-93 Nuclear Hormone Receptor family 13212318 IBA
cel nhr-36 Nuclear Hormone Receptor family 24104398 IBA
cel Y48G1BL.8 Small nuclear RNA-activating complex polypeptide 3 25502999 IBA


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