| functional annotation |
| Function |
Ssu72 RNA polymerase II CTD phosphatase homolog (yeast) |
|
| GO BP |
|
GO:0070940 [list] [network] dephosphorylation of RNA polymerase II C-terminal domain
|
(5 genes)
|
IBA
ISO
|
 |
|
GO:0006369 [list] [network] termination of RNA polymerase II transcription
|
(6 genes)
|
IBA
|
|
|
GO:0006378 [list] [network] mRNA polyadenylation
|
(30 genes)
|
IBA
ISO
|
|
|
GO:0006397 [list] [network] mRNA processing
|
(415 genes)
|
IEA
|
|
|
| GO CC |
|
GO:0005847 [list] [network] mRNA cleavage and polyadenylation specificity factor complex
|
(18 genes)
|
IBA
|
|
|
GO:0005654 [list] [network] nucleoplasm
|
(3580 genes)
|
ISO
|
|
|
GO:0005829 [list] [network] cytosol
|
(3785 genes)
|
ISO
|
|
|
GO:0005634 [list] [network] nucleus
|
(7226 genes)
|
IEA
|
|
|
GO:0005737 [list] [network] cytoplasm
|
(11434 genes)
|
IEA
|
|
|
| GO MF |
|
GO:0008420 [list] [network] RNA polymerase II CTD heptapeptide repeat phosphatase activity
|
(7 genes)
|
IBA
ISO
|
|
|
GO:0106306 [list] [network] protein serine phosphatase activity
|
(72 genes)
|
IEA
|
|
|
GO:0106307 [list] [network] protein threonine phosphatase activity
|
(72 genes)
|
IEA
|
|
|
GO:0004722 [list] [network] protein serine/threonine phosphatase activity
|
(92 genes)
|
IEA
|
|
|
GO:0004721 [list] [network] phosphoprotein phosphatase activity
|
(171 genes)
|
IEA
|
|
|
GO:0016787 [list] [network] hydrolase activity
|
(2400 genes)
|
IEA
|
|
|
| KEGG |
mmu03015 [list] [network] mRNA surveillance pathway (103 genes) |
 |
| Protein |
NP_081175.2
|
| BLAST |
NP_081175.2
|
| Orthologous |
[Ortholog page]
SSU72 (hsa)
Ssu72 (dme)
ssup-72 (cel)
Ssu72 (rno)
ssu72 (dre)
SSU72 (gga)
SSU72 (cfa)
LOC485220 (cfa)
LOC608299 (cfa)
SSU72 (mcc)
SSU72 (sce)
SSU72 (fca)
LOC111559045 (fca)
|
Subcellular
localization
wolf |
|
mito 6,
cyto 2,
nucl 1,
cyto_plas 1,
cyto_golg 1
|
(predict for NP_081175.2)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
| KEGG* ID |
Title |
#genes |
Link to the KEGG* map
(Multiple genes) |
| mmu03050 |
Proteasome |
16 |
 |
| mmu05010 |
Alzheimer disease |
16 |
 |
| mmu05012 |
Parkinson disease |
16 |
 |
| mmu05014 |
Amyotrophic lateral sclerosis |
16 |
 |
| mmu05016 |
Huntington disease |
16 |
 |
Genes directly connected with Ssu72 on the network
| coex z* |
Locus |
Function* |
Coexpression
detail |
CoexPub |
Entrez Gene ID* |
| 6.3 |
Psmb3 |
proteasome (prosome, macropain) subunit, beta type 3 |
[detail] |
0 |
26446 |
| 6.0 |
Psmb2 |
proteasome (prosome, macropain) subunit, beta type 2 |
[detail] |
0 |
26445 |
| 5.8 |
Psmd8 |
proteasome (prosome, macropain) 26S subunit, non-ATPase, 8 |
[detail] |
0 |
57296 |
|
Coexpressed
gene list |
[Coexpressed gene list for Ssu72]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
| Tissue specificity* |
|
Ssu72 Gene
