last update; Aug. 24. 2018
| GSE ID (Link to GEO) | # Of slides | Experimental type | Sample description | RMA normalized data |
|---|---|---|---|---|
| GSE2109 | 1186 | cancer portraits | Expression Project for Oncology (expO) | part1 part2 part3 |
| GSE2125 | 45 | parallel sample | isolated alveolar macrophages | download |
| GSE2328 | 9 | other | Application of genome-wide expression analysis to human health & disease | download |
| GSE2435 | 6 | ordered | Autophagy promotes MHC class II presentation of peptides from intracellular source proteins | download |
| GSE2555 | 2 | parallel sample | HCaRG-9 vs NEO-1 | download |
| GSE2600 | 6 | ordered | Anaplasma phagocytophilum infected NB4 cells | download |
| GSE2634 | 17 | parallel sample | Comparison of human and non-human primate gene expression profiles | download |
| GSE2677 | 39 | other | Prednisolone treated childhood ALL samples | download |
| GSE2816 | 6 | repeat | cMyb and vMyb in human monocytes | download |
| GSE2817 | 30 | wavelet, glioma, unsupervised | Wavelet modelling of microarray data provides chromosomal pattern of expression which predicts survival in gliomas | download |
| GSE2842 | 45 | treatment response | Additional systems to Prednisolone treated childhood ALL samples | download |
| GSE2864 | 6 | time-course | tourt-affy-human-131547 | download |
| GSE3077 | 12 | Dilution series, platform comparison, Affymetrix, Illumina | Dillution series comparison of Affymetrix and Illumina Expression Platforms | download |
| GSE3202 | 23 | drug treatment | MK886 treatment of H720 non-small cell lung cancer cell line | download |
| GSE3284 | 18 | Gene expression profiling of human blood leukocytes in response to in vivo endotoxin administration. | A network-based analysis of systemic inflammation in humans | download |
| GSE3325 | 19 | prostate cancer progression | Integrative Genomic and Proteomic Analysis of Prostate Cancer Reveals Signatures of Metastatic Progression | download |
| GSE3526 | 353 | normal human tissue comparison | Comparison of gene expression profiles across the normal human body | download |
| GSE3678 | 14 | gene expression analysis | PTC versus paired normal thyroid tissue | download |
| GSE3744 | 47 | Type | Human breast tumor expression | download |
| GSE4030 | 8 | time-course | bunge-affy-arabi-162779 | download |
| GSE4036 | 28 | other | perro-affy-human-186940 | download |
| GSE4064 | 4 | tissue type and state comparison | Gene expression of growing antler in Cervus elaphus | download |
| GSE4086 | 4 | Hypoxia responsive, case control | Hypoxia responsive genes in human Burkitt's lymphoma cell line, P493-6. | download |
| GSE4182 | 9 | Prenatal gene expression signature | Genetic background of the polygenic neural tube defect | download |
| GSE4217 | 12 | other | Spheroid Formation and Recovery of Human Foreskin Fibroblasts at Ambient Temperature | download |
| GSE4218 | 12 | other | Spheroid Formation and Recovery of Human T98G Glioma Cells at Ambient Temperature | download |
| GSE4219 | 24 | SuperSeries | Spheroid Formation and Recovery of Human Foreskin Fibroblasts and T98G Glioma Cells at Ambient Temperature | download |
| GSE4237 | 10 | other | Hussaini-2R01NS035122-06A1 | download |
| GSE4250 | 4 | tissue specific expression profile | Determination of expression level of gingiva expressed genes | download |
| GSE4488 | 7 | affected and obligatory carriers vs controls | Expression data from whole blood | download |
| GSE4567 | 8 | particle treatment | Endothelial cell culture with Chapel Hill Ultrafine particle | download |
| GSE4600 | 11 | Neuronal Differentiation, Targets of MeCP2, Rett syndrome. | Identifying targets of MeCP2 during neuronal maturational differentiation | download |
| GSE4737 | 2 | parallel sample | HCaRG vs NEO | download |
| GSE4757 | 20 | other | Rogers-3U24NS043571-01S1 | download |
| GSE4773 | 20 | time-course | Greene-5P01NS017771-220003 | download |
| GSE4780 | 57 | other | Scheck-3U24NS043571-01S1-2 | download |
| GSE4824 | 6 | cell type comparison | Analysis of lung cancer cell lines | download |
| GSE4883 | 9 | time-course, response to treatment | Simvastatin has an anti-inflammatory effect on macrophages via upregulation of Kruppel-like factor-2 | download |
| GSE4888 | 27 | Gene expression arrays human endometrium | Molecular phenotyping of human endometrium | download |
| GSE4984 | 12 | dendritic cell maturation | Monocyte Derived Dendritic Cell Maturation | download |
| GSE5040 | 24 | human lymphoblast cells | Polyamides alleviate transcription inhibition associated with long GAA*TTC repeats in Friedreich's ataxia | download |
| GSE5109 | 6 | Time-Series | Gastric Bypass Human Obese Muscle | download |
| GSE5110 | 10 | stimulus or stress design | 48h Immobilization in human | download |
| GSE5145 | 6 | comparison | Genes regulated by vitamin D in bronchial smooth muscle cells | download |
| GSE5264 | 30 | time course | Human bronchial epithelial cell differentiation time course | download |
| GSE5281 | 74 | other | steph-affy-human-433773 | download |
| GSE5350 | 140 | Cross-platform comparison | MicroArray Quality Control (MAQC) Project | download |
| GSE5372 | 22 | response to airway injury | airway epithelium, large airways, pre and post-mechanical injury | download |
| GSE5486 | 8 | microarray, gene expression, Affymetrix, drug treatment, emetine, caffeine, actinomycin D, novel tumor suppressor gene candidates | Using GINI2 to identify novel mutations in candidate tumor suppressor genes in colon cancer cells | download |
| GSE5563 | 19 | disease state analysis | Gene expression profile of VIN lesions in comparison to controls | download |
| GSE5675 | 41 | Human, WHO grade I, BRain tumor, Pilocytic astrocytoma, NF1 | Pilocytic astrocytoma | download |
| GSE5679 | 11 | ligand response | Comparative gene expression profile of PPARg and RARa ligand treated human dendritic cells | download |
| GSE5741 | 9 | treatment with non-treatment control | Expression data from ARPE-19 cells treated with LDL or ox-LDL | download |
| GSE5764 | 30 | cell type comparison | Analysis of microdissected invasive lobular and ductal breast carcinomas in relation to normal ductal and lobular cells | download |
| GSE5787 | 33 | disease state comparison | Survey of Intra- and Inter-Tumour Heterogeneity of Gene Expression in Cervical Cancer | download |
| GSE5809 | 14 | Gene expression arrays in human stromal cells | Decidual stromal cell response to paracrine signals from the trophoblast | download |
| GSE5816 | 29 | Cell line comparison | A Genome-wide Screen for Hypermethylated Genes in Lung Cancer | download |
| GSE5823 | 20 | siRNA analysis | Effects of RNA interference-mediated c-MYC depletion on gene expression profiles in human cancer cell lines | download |
| GSE5968 | 12 | ERRalpha, PGC-1alpha, nuclear receptor, orphan nuclear receptor, coactivator, transcription factors | Identification of ERRalpha dependent PGC-1alpha tagret genes | download |
| GSE5993 | 6 | differential expression profiling from transcription factor depletion | mRNA expression profiling of p63-depleted versus wildtype ME180 cells | download |
| GSE6004 | 18 | Genetic modification | Gene Expression and Functional Evidence of Epithelial-to-Mesenchymal Transition in Papillary Thyroid Cancer Invasion | download |
| GSE6013 | 27 | time course, gene expression, cell line, asbestos | Gene expression in asbestos exposed lung cells | download |
| GSE6021 | 4 | RNA immunoprecipitation | Immunoprecipitation of PTB65 associated mRNAs | download |
| GSE6022 | 6 | RNA immunoprecipitation | Immunoprecipitation of U2AF65 associated mRNAs | download |
| GSE6075 | 3 | oncogenesis. | E6 in HOK/Bmi-1 cells | download |
| GSE6090 | 6 | Activation state, signalling, Toll-like Receptor (TLR) | DC-SIGN initiates an immature dendritic cell phenotype triggering Rho activation that is utilised by HIV-1 | download |
| GSE6092 | 8 | Cell response to inflammatory stimuli | IFN-gamma alters the response of Borrelia burgdorferi-activated endothelium to favor chronic inflammation | download |
| GSE6140 | 6 | platform comparison | Cross platform microarray analysis for robust identification of differentially expressed genes | download |
| GSE6207 | 14 | time course | miR-124 transfection time course | download |
| GSE6233 | 2 | Gene expression after RNAi | Expression data in ezrin-knockdown ec109 cells(PSE1) and control(PS) | download |
| GSE6241 | 8 | time course | The effects of Serum Amyloid A on gene expression profile in HUVECs | download |
| GSE6257 | 6 | TNFalpha, Lymphatic endothelium, induction, Inflammation | An inflammation-induced mechanism for leukocyte transmigration of lymphatic vessel endothelium. | download |
| GSE6269 | 22 | expression analysis | Gene expression patterns in blood leukocytes discriminate patients with acute infections | download |
| GSE6276 | 6 | dose response | rogae-affy-human-323460 | download |
| GSE6281 | 34 | time course, allergic response | Gene expression time-course in the human skin during elicitation of allergic contact dermatitis | download |
| GSE6283 | 21 | Trisomy, Down syndrome, Patau syndrome, Edward syndrome, microarray, gene expression, amniocytes, chorion villus cells, gene dosage effect, DSCR1 | Specific transcriptional networks in human fetus with autosomal trisomies | download |
| GSE6338 | 60 | Molecular pathogenesis, molecular classification | Gene expression analysis of Peripheral T-cell Lymphoma/Unspecified | download |
| GSE6357 | 6 | Renal cell carcinoma, CD8+ T cells, microarray, apoptosis, JAK3 | Activation of human CD8+ T cells in renal cell carcinoma | download |
| GSE6364 | 37 | disease state analysis | Gene Profiling of Endometrium Reveals Progesterone Resistance and Candidate Genetic Loci in Women with Endometriosis | download |
| GSE6369 | 2 | disease-state analysis | Prostate Adenocarcinoma Progression | download |
| GSE6400 | 12 | responses to treatments with anti-cancer agents | Cultured A549 lung cancer cells treated with actinomycin D and sapphyrin PCI-2050 | download |
| GSE6451 | 6 | overexpression of different antioxidant response element activators | A genomic screen for activators of the antioxidant response element | download |
| GSE6495 | 6 | comparative genomic hybridization | NOTCH signaling in T-cell acute lymphoblastic leukemia cell lines | download |
| GSE6519 | 12 | dietary dose response | Microarray Analysis of Baboon neonates consuming long-chain polyunsaturated fatty acid formula | download |
| GSE6521 | 37 | time course | MCF7 inhibitor | download |
| GSE6532 | 87 | disease state analysis | Definition of clinically distinct molecular subtypes in estrogen receptor positive breast carcinomas using genomic grade | download |
| GSE6561 | 4 | karyotypically abnormal hESC vs karyotypically normal hESC. | Expression data from hsr containing human embryonic stem cell line, H14, and parent H14 human embryonic stem cell line. | download |
| GSE6573 | 6 | disease comparison, disease state | Dysregulation of the circulating and tissue-based renin-angiotensin system in preeclampsia | download |
| GSE6575 | 56 | autism analysis | Gene expression in blood of children with autism spectrum disorder | download |
| GSE6653 | 8 | Time-course | Gene expression analysis of IOSE cells treated with TGFb1, a time course study | download |
| GSE6743 | 6 | Human T cell, vitamin D and A, chemokine receptor, nuclear receptor | 1,25 (OH)2 vitamin D3 induces expression of CCR10 and other genes | download |
| GSE6791 | 81 | Gene expression ptofiles of primary cancers | Gene Expression Profiles of HPV-Positive and -Negative Head/Neck and Cervical Cancers | download |
| GSE6816 | 2 | Melanotransferrin, hyperexpression cell lines, comparative genomic hybridization | Hyperexpression of Human Melanotransferrin on SK-N-MC Cell Line | download |
| GSE6817 | 3 | Melanotransferrin, siRNA, comparative genomic hybridization | Downregulation of Human Melanotransferrin on SK-Mel-28 Cell Line | download |
| GSE6819 | 6 | siRNA treatment study | Identification of genes that are linked with optineurin expression | download |
| GSE6833 | 5 | SuperSeries | Hyperexpression and Downregulation of Melanotransferrin on Various Cell Lines | download |
| GSE6863 | 6 | stress response, cell differentiation | Immature dendritic cells under hypoxic condition | download |
| GSE6872 | 21 | disease state analysis | Spermatozoal RNA Profiles (U133 Plus 2.0 Array) | download |
| GSE6890 | 5 | cell line comparison | Transcriptome maps of six different human cell lines | download |
| GSE6960 | 12 | Dose response | Synthesis and Anticancer Properties of Water-Soluble Zinc Ionophores 1 | download |
| GSE6962 | 12 | Dose response | Synthesis and Anticancer Properties of Water-Soluble Zinc Ionophores 2 | download |
| GSE6965 | 4 | dendritic cell, A. fumigatus germ tubes, infection for 6h, affymetrix whole genome microarray analysis | Gene expression profil of human dendritic cells after infection with A. fumigatus | download |
| GSE6969 | 21 | SuperSeries | Spermatozoal RNA Profiles from Normally Fertile and Heterogeneously Teratozoospermic Subjects | download |
| GSE6972 | 24 | SuperSeries | Synthesis and Anticancer Properties of Water-Soluble Zinc Ionophore: Cell Culture and Xenograft Model | download |
| GSE7036 | 6 | Bipolar Disorder, Monozygotic Twins, Discordant, Trasnsformed Lymphocytes | Expression profiling in monozygotic twins discordant for bipolar disorder | download |
| GSE7153 | 17 | Affymetrix Hu133_Plus microarrays | Transcriptional targets of p16INK4A in melanoma | download |
| GSE7181 | 6 | Cancer stem cell, CD133, glioblastoma | CD133+ and CD133- CSC lines in primary human GBM | download |
| GSE7213 | 4 | comparative expression profiling | Comparative analysis of cellular mRNA incorporation into MLV and HIV1 virus-like particles | download |
| GSE7216 | 25 | cytokine response | Cytokine treated normal human epidermal keratinocytes | download |
| GSE7234 | 4 | different karyotype | Expression data from different karyotypic human embryonic stem cells | download |
| GSE7247 | 10 | Loading methodology comparison | Dendritic Cells Compare the Similarity of Endogenous and Exogenous Antigens | download |
| GSE7305 | 20 | Human tissue transcriptional profiling | Human endometriosis vs normal endometrium study - transcriptional profiling | download |
| GSE7307 | 677 | Human body index of gene expression | Human body index - transcriptional profiling | part1 part2 |
| GSE7364 | 8 | genomic DNA, CGH, Copy Number Variation | Gene-resolution analysis of DNA copy number variation using oligonucleotide expression microarrays | download |
| GSE7382 | 6 | Inducible cell lines | Expression profiling of MCF-7 cells with inducible LMO4 and DN-Clim expression | download |
| GSE7392 | 30 | time course, comparative expression | Molecular Evidence of Injury and Inflammation in Normal and Fibrotic Renal Allografts One Year Post-Transplant | download |
| GSE7508 | 6 | effects of gene knockdown | Identification of LEDGF-responsive genes in Jurkat cells | download |
| GSE7509 | 26 | response to antibody | Gene expression changes in anti-FcgRIIb treated DCs and monocytes | download |
| GSE7554 | 8 | comparison, experiemental versus control | Identification of Cellular Genes Targeted by KSHV-Encoded MicroRNAs | download |
| GSE7578 | 15 | shRNA knock-down | shRNA-mediated knock down of Bmi-1 and Mel-18 in medulloblastoma cells | download |
| GSE7708 | 14 | Gene expression changes in cultured LNCaP cells after DHT-stimulation and various treatment conditions | Suppression of androgen receptor mediated gene expression by a sequence-specific DNA binding polyamide | download |
| GSE7745 | 6 | ChIP-CHIP and expression data | Mapping of HNF4α binding sites, acetylation of histone H3 and expression in Caco2 cells | download |
| GSE7835 | 15 | Gene expression changes in cultured U251 cells after DFO-stimulation and various treatment conditions | Modulating hypoxia-inducible transcription by disrupting the HIF-1-DNA interface | download |
| GSE7845 | 2 | Comparative genomic hybridization | Proinflammatory Responses of Human Airway Cells to Ricin Involve Stress-Activated Protein Kinases and NF-κB | download |
