last update; Aug. 24. 2018
| GSE ID (Link to GEO) | # Of slides | Experimental type | Sample description | RMA normalized data |
|---|---|---|---|---|
| GSE1074 | 12 | Ordered | Strain-dependent effects of alcohol on early mouse embryos | download |
| GSE1435 | 27 | other | Microarray Based Comparison of two Amplification Methods For Nanogram Amounts of Total RNA | download |
| GSE1479 | 36 | time-course | C57BL/6 Benchmark Set for Early Cardiac Development | download |
| GSE1835 | 4 | dose response | Myocilin effect on retina. Russell-7U24NS043571-02 | download |
| GSE1871 | 12 | other | SCCOR_MouseLung_Simva_LPS | download |
| GSE1986 | 17 | other | Global gene expression across a range of tissues | download |
| GSE1999 | 15 | dose response | Neuroprotective effects of erythropoietin. Wilson-5R01NS028208-15 | download |
| GSE2019 | 11 | ordered | Microarray Based Comparison of three Amplification Methods For Nanogram Amounts of Total RNA | download |
| GSE2060 | 5 | parallel sample | Characterize CREB target genes in different tissue types | download |
| GSE2161 | 8 | other | Identification of genes that are dysregulated in the telencephalon of Dlx1/2 mutants. Rubenstein-2R01MH049428-11 | download |
| GSE2372 | 6 | other | Aortae of 32 weeks old apoE mice | download |
| GSE2389 | 4 | repeat sample | Regulatory T cell lineage specification by Foxp3 | download |
| GSE2463 | 2 | ordered | Targets of FGFR2-IIIb signalling in the hair follicle | download |
| GSE2843 | 5 | treatment response | thymic mouse cells | download |
| GSE2869 | 8 | other | Rosenfeld-5R01NS034934-14 | download |
| GSE2873 | 4 | other | Burden-2R01NS036193-06A1 | download |
| GSE3100 | 23 | disease state analysis | Cystic Fibrosis Mouse Lung Profiles | download |
| GSE3203 | 16 | Infection-induced responses | Influenza virus infection-induced gene expression changes of regional B cells are mediated in part through type I IFN | download |
| GSE3414 | 36 | Time Course | Immune Response to Nippostrongylus brasiliensis in the mouse lung | download |
| GSE3425 | 2 | treatment response | Silencing of microRNAs in vivo with "antagomirs" | download |
| GSE3440 | 14 | time series | Effect of aldosterone on gene expression in the heart | download |
| GSE3463 | 12 | Time course and comparison of sexes | Expression profiling of mouse gonadal somatic cells | download |
| GSE3554 | 6 | retina, glaucoma, DBA/2J, elevated intraocular pressure | Microarray Analysis of Retinal Gene Expression in the DBA/2J Model of Glaucoma | download |
| GSE3653 | 16 | Ngn3 induction, embryonic stem cell differentiation | Inducible Ngn3 Embryonic Stem Cells | download |
| GSE3822 | 16 | embryonic metanephric kidney, kidney development, Hoxa11, Hoxd11, compound null targeted mice | Complete embryonic E11.5 metanephric kidney analysis of wild type and Hoxa11, Hoxd11 null targeted mice | download |
| GSE4034 | 24 | dose response | palme-affy-mouse-198967 | download |
| GSE4035 | 24 | NIH Neuroscience Microarray Consortium | palme-affy-mouse-84746 | download |
| GSE4040 | 6 | dose response | sikes-affy-mouse-84486 | download |
| GSE4041 | 6 | other | zhang-affy-mouse-200705 | download |
| GSE4043 | 6 | time course, cell type comparison | Gene profiling analysis of Src chemical rescue | download |
| GSE4051 | 39 | Transcription factor, development, photoreceptor, retina, neuron, differentiation, gene regulation, microarray, gene profiling, cell type comparison | Targeting of GFP to new-born rods by Nrl promoter and temporal expression profiling of flow-sorted photoreceptors | download |
| GSE4098 | 16 | repeat | Mouse limbal epithelial basal cells vs. corneal epithelial basal cell gene expression profile | download |
| GSE4142 | 14 | Cell Type Comparison | Molecular Analysis of antigen-specific B cell responses | download |
| GSE4179 | 3 | cell type comparison | A function for interleukin 2 in Foxp3-expressing regulatory T cells | download |
| GSE4189 | 14 | Array Based | The Oct4 and Nanog transcription network that regulates pluripotency in mouse embryonic stem cells | download |
| GSE4193 | 8 | Specific germ cells from murine testis | Gene expression in murine germ cells | download |
| GSE4230 | 8 | tissue specificity, time course, development, kidney, metanephric mesenchyme, nephron, Lim1, knockout mice, conditional knockout | Gene expression profiles in developing nephrons using Lim1 metanephric mesenchyme-specific conditional mutant mice | download |
| GSE4260 | 6 | time course | Cumulus-oocyte complex temporal expression | download |
| GSE4307 | 20 | Single cell analysis | Expression data from single cells from ICMs of mouse blastocysts at E3.5 | download |
| GSE4308 | 16 | Method validation | Expression data for validation of single cell cDNA amplification method (V1V3 method) | download |
| GSE4309 | 36 | SuperSeries | An improved single-cell cDNA amplification method for efficient high-density oligonucleotide microarray analysis | download |
| GSE4332 | 8 | time_series_design | Cell intrinsic alterations underlie hematopoietic stem cell aging | download |
| GSE4411 | 11 | other | burde-affy-arabi-64764 | download |
| GSE4413 | 4 | other | katz-affy-mouse-212743 | download |
| GSE4481 | 18 | Growth plate zone comparison and treatment response analysis | C-type natriuretic peptide regulates endochondral ossification through p38 MAP kinase-dependent pathways_2 | download |
| GSE4658 | 6 | static vs simulated microgravity | static vs simulated microgravity | download |
| GSE4695 | 6 | endothelin-1; Et1; dermal fibroblast | Changes in gene expression in dermal fibroblasts following exposure to Et1 peptide | download |
| GSE4752 | 6 | other | tourt-affy-mouse-243760 | download |
| GSE4756 | 8 | dose response | ruiz-affy-mouse-243540 | download |
| GSE4758 | 24 | time-course | conra-affy-mouse-89474 | download |
| GSE4774 | 15 | other | ruben-affy-mouse-187820 | download |
| GSE4786 | 9 | Effect of aging, effect of caloric restriction, time course, disease state analysis | Caloric restriction suppresses apoptotic cell death in the mammalian cochlea and leads to prevention of presbycusis | download |
| GSE4866 | 10 | disease state analysis | The role of mtDNA mutations in age-related hearing loss in mice carrying a mutator DNA polymerase gamma | download |
| GSE4936 | 8 | neural progenitors, embryoid bodies, differentiation, Hedgehog, retinoic acid | Transcriptional Profiling of Hh-Treated Embryoid Bodies | download |
| GSE5018 | 3 | Bhlhb8, Mist1, mucous neck cell, laser-capture microdissection, zymogenic, gastric cell differentiation | A profile of murine gastric epithelial cells: Parietal, Zymogenic, Pit | download |
| GSE5035 | 12 | time-course | zhang-affy-arabi-50806 | download |
| GSE5036 | 4 | dose response | zhang-affy-mouse-175010 | download |
| GSE5037 | 18 | dose response | zhang-affy-mouse-217286 | download |
| GSE5038 | 9 | other | zhang-affy-mouse-308606 | download |
| GSE5124 | 6 | gene swap, knock-in, hindbrain development, rhombomere 4 | Hoxb1 gene expressing Hox-A1 protein: Altered transcriptional profile in rhombomere 4 at E10.5 | download |
| GSE5127 | 18 | toxicology, chemical carcinogenesis, lung | Gene Expression Biomarkers for Predicting Lung Tumors in Two-Year Rodent Bioassays | download |
| GSE5128 | 18 | toxicology, chemical carcinogenesis, liver | Gene Expression Biomarkers for Predicting Liver Tumors in Two-Year Rodent Bioassays | download |
| GSE5156 | 4 | functional genomics; transcriptional profiling | Impact of intestinal colonization on Paneth cell gene expression | download |
| GSE5198 | 18 | response to microbial colonization | Transcriptional profiling of mouse ileum in response to colonization with a zebrafish or mouse gut microbiota | download |
| GSE5202 | 12 | time course | Expression data from B. melitensis infected mouse macrophages | download |
| GSE5296 | 96 | Time-Series | Spinal Cord Injury Murine Model | download |
| GSE5298 | 8 | genetic modification | Development of heart valves requires Gata4 expression in endothelial-derived cells | download |
| GSE5309 | 7 | Normal C57BL/6 Mammary Gland Epithelial Cells | Transcriptional Profiling of Mammary Gland Side Population Cells | download |
| GSE5324 | 48 | mRNA degradation, time course, knockout experiment | TTP mRNA targets identified by global analysis of stabilized transcripts in TTP-deficient fibroblasts | download |
| GSE5338 | 8 | genetic modification | In vivo function of NR2E3 in establishing photoreceptor identity during mammalian retinal development | download |
| GSE5500 | 21 | genetic modification, pressure overload stress response | Gata4 is required for postnatal cardiac function and protection from pressure overload-induced heart failure | download |
| GSE5582 | 6 | neocortical astrocyte, cerebellar astrocyte, murine, postnatal day 1 | Neocortical and cerebellar astrocytes | download |
| GSE5587 | 6 | other | tourt-affy-arabi-307860 | download |
| GSE5657 | 20 | 2x2 factorial design with complete blocks | Effect of X-linked hypophosphatemia (the Hyp mutation) on gene expression in the mid-shaft of the mouse femur | download |
| GSE5668 | 6 | Developmental stage (mature vs. immature) comparison | Identification and characterization of the changed and stable transcripts during mouse oocyte maturation | download |
| GSE5715 | 10 | disease state analysis | Intestinal Phenotype of Variable Weight Cystic Fibrosis Knockout Mice | download |
| GSE5817 | 21 | other | marsh-affy-mouse-232749 | download |
| GSE5959 | 6 | Genetic variation | Expression differences in the liver of a congenic mouse with low serum IGF-1 | download |
| GSE5976 | 12 | time course | Mesp1-induced gene expression changes | download |
| GSE5985 | 4 | cell stimulation | Gene expression profile of BAFF-stimulated B cells | download |
| GSE5987 | 11 | Tumor vs normal comparisons | Mouse model of Endometrioid Ovarian Adenocarcinomas by conditional inactivation of PTEN and APC genes | download |
| GSE6055 | 8 | disease state analysis, time course | Gene Expression Profiling Reveals Unique Pathways Associated with Differential Severity of Lyme Arthritis | download |
| GSE6065 | 100 | Aeromonas; Virulence; Gene expression; Host response | Murine host cell response to Aeromonas infection | download |
| GSE6078 | 5 | Disease state analysis, genetic modification, Intestinal polyposis, PTEN mutant, Cowden disease mouse model | PTEN-deficient intestinal stem cells initiate intestinal polyposis | download |
| GSE6079 | 2 | expression comparison | expression comparison of wildtype lungs and hypomorphic for nmyc | download |
| GSE6116 | 70 | toxicology, chemical carcinogenesis, lung | Transcriptional Biomarkers to Predict Female Mouse Lung Tumors in Rodent Cancer Bioassays - A 13 Chemical Training Set | download |
| GSE6210 | 12 | Liver and quadricpes muscle gene expression, WT vs. PGC1beta mutant | Hypomorphic Mutation in PGC1beta causes mitochondrial dysfunction and liver insulin resistance | download |
| GSE6223 | 13 | Gene expression comparison from developing regions of the mouse embryonic day 14 urogenital system | Gene expression profiles of embryonic day 14 bladder, urogenital sinus, and urethra. | download |
| GSE6257 | 2 | TNFalpha, Lymphatic endothelium, induction, Inflammation | An inflammation-induced mechanism for leukocyte transmigration of lymphatic vessel endothelium. | download |
| GSE6259 | 21 | cell type comparison of wildtype and Flt3L melonom spleen DCs and splenic B cells, CD4 and CD8 T cells | Differential antigen processing by dendritic cell subsets in vivo | download |
| GSE6290 | 37 | Comparison of kidney components. | Gene expression profiles of components of the developing kidney | download |
| GSE6291 | 6 | mRNA expression profiling, oligonucleotide microarrays, stem cells | Transcriptome Analysis Multipotent Adult Progenitor Cells (Affy) | download |
| GSE6376 | 4 | stress response | Zymosan stimulation of MyD88-deficient bone marrow-derived macrophages | download |
| GSE6383 | 6 | comparative genomic hybridization: epithelium vs. mesenchyme | Mouse small intestine epithelium vs. mesenchyme | download |
| GSE6397 | 14 | disease state modification | Comparison between gene expression in heart from Lmna H222P heterozygous and control mice | download |
| GSE6398 | 14 | disease state modification | Comparison between gene expression in heart from Lmna H222P homozygous and control mice | download |
| GSE6399 | 14 | disease state modification | Comparison between gene expression in heart from Emd KO and control mice | download |
| GSE6424 | 4 | hematopoietic stem cells , immortalization, ÁEcatenin, genetic modification, time course | ÁEcatenin Plays a Dual Role in the Generation and Maintenance of Immortalized Hematopoietic Stem Cells | download |
| GSE6461 | 9 | tumor versus normal muscle tissue | SYT-SSX murine synovial sarcoma model | download |
| GSE6466 | 7 | Gene expression comparison between postnatal day 1 and adult bladders | Gene expression profiles of postnatal day 1 and adult bladders | download |
| GSE6482 | 9 | Cell type comparison | mECK36: a cell and animal model of virally induced Kaposi's sarcoma | download |
| GSE6487 | 30 | Time-Series | Myogenesis MyoD | download |
| GSE6514 | 90 | gene expression, temporal changes, brain, behavior, sleep, | Gene expression in the mouse brain during spontaneous sleep and prolonged wakefulness | download |
| GSE6526 | 16 | time course | Expression time course data HEY2 KO and WT MASMC treated with PDGF | download |
| GSE6589 | 11 | Comparison of kidney components. | Gene expression profiles of components of the developing kidney (GUDMAP Series_id: 12) | download |
| GSE6595 | 40 | embryo kind comparison | Gene expression study in 1 and 2 cell cloned mice embryos | download |
| GSE6623 | 12 | Hematopoietic stem cells, myeloid progenitors, oxidative stress, ROS, Affymetrix Mouse Genome 430 2.0 | FoxO are critical mediators of hematopoietic stem cell resistance to physiologic oxidative stress | download |
| GSE6675 | 8 | fibroblast growth factor-2 treatment | Astroglial gene expression program elicited by fibroblast growth factor-2 mande-affy-mouse-307080 | download |
| GSE6676 | 8 | TGF-beta overexpression | Comparison of corneas from wildtype mice to those from mice under the influence of high doses of TGF-beta russe-affy-mouse-372894 | download |
| GSE6678 | 18 | gene knockout | Palmitoyl protein thioesterase-1 knockout mice hofma-affy-mouse-370000 | download |
| GSE6681 | 4 | genetic modification | Foxp3 ablation in peripheral mature regulatory T cells | download |
| GSE6765 | 9 | Aeromonas caviae, infection, disease mechanism, TH1 resposne | Aeromonas caviae infection, 24 hours | download |
| GSE6770 | 4 | Genetic Modification | Gene Expression Data in HDAC2 KO Myocardium | download |
| GSE6789 | 12 | genetic modification, strain comparison, cell stimulation, time course, inflammatory response | response to IL-1b of WT and IRAK4 kinase dead mouse embryonic fibroblasts | download |
| GSE6815 | 4 | Melanotransferrin, hyperexpression cell lines, comparative genomic hybridization | Hyperexpression of Mouse Melanotransferrin on LMTK Cell Line | download |
| GSE6833 | 4 | SuperSeries | Hyperexpression and Downregulation of Melanotransferrin on Various Cell Lines | download |
| GSE6837 | 8 | comparative study | Expression data from wild type (wt) and Ikbke knockout (Ikke) embryonic fibroblasts (EF) | download |
| GSE6858 | 16 | case control | Expression data from experimental murine asthma | download |
| GSE6867 | 6 | genetic modification | Expression data in the absence of Notch1 in hair follicles | download |
| GSE6875 | 8 | Cell type comparison | Development of Regulatory T cell Precursors in the Absence of a Functional Foxp3 Protein | download |
| GSE6881 | 10 | Time Course | Embryonic Testis Developmental Time Course | download |
| GSE6882 | 10 | Time course | Embryonic Ovary Developmental Time Course | download |
| GSE6916 | 20 | SuperSeries | Embryonic Testis/Ovary Developmental Time Courses | download |
| GSE6934 | 4 | mutant comparison | Wnt4-dependent gene expression in the developing kidney (GUDMAP Series_id: 13) | download |
| GSE6945 | 4 | mouse embryonic fibroblasts, gene expression profiling, microarray, Affymetrix Mouse Genome 430 2.0, cell type comparison | The Retinoblastoma Binding Protein RBP2 is an H3K4 demethylase | download |
| GSE6958 | 2 | cell treatment comparison | FOG-1-independent transcripition by GATA-1(V205G) in G1E cells | download |
| GSE6959 | 12 | repeat | Oscillating gene expression in the prefrontal cortex of C57Bl/6J mice at Zeitgeber Time (ZT) 3, 9, 15, and 21. | download |
| GSE6963 | 4 | Gene expression analysis of the postnatal day 1 mouse ureter | Gene expression profiles of mouse postnatal day 1 ureter (GUDMAP Series_id: 14) | download |
| GSE6980 | 16 | XBP-1, MGUS, multiple myeloma, transgenic mouse | The Differentiation and Stress Response Factor, XBP-1, Drives Multiple Myeloma Pathogenesis | download |
| GSE6998 | 32 | time course | Expression profiling of developmental and regenerating liver in mice | download |
| GSE7012 | 13 | time series | Identif. of oscillatory genes in somitogenesis from functional genomic analysis of C2C12 myoblast line | download |
| GSE7020 | 8 | strain comparison | The molecular consequences of Nix ablation on apoptosis and erythropoiesis | download |
| GSE7050 | 18 | Lckcre, CD4Cre-Ctnnbex3, lymphoma, gene expression | Stabilization of b-catenin induces lymphomas | download |
| GSE7054 | 13 | SuperSeries | Identification of oscillatory genes in somitogenesis from functional genomic analysis | download |
| GSE7069 | 8 | Global gene expression data analysis in Zfx-deficient murine ESC and HSC | Zfx controls the self-renewal of embryonic and hematopoietic stem cells | download |
| GSE7196 | 6 | microarray and genetic modification | Differential gene expression between WT and ERRa-null hearts | download |
| GSE7257 | 9 | Lim1 mutant, kidney development, gene expression profile comparison | Laser capture-microarray analysis of Lim1 mutant kidney development. | download |
| GSE7280 | 10 | cell type comparison, response to growth factor, genetic modification | Gene expression in peripheral cells: effects of Foxp3 and PDE3B | download |
| GSE7302 | 6 | cell type comparison | Expression data from bone marrow hematopoietic stem cell CD34 Flt3 subfractions | download |
| GSE7324 | 10 | genetic modification | Structural basis for recognition of SMRT/N-CoR by the MYND domain and its contribution to AML1/ETO's activity | download |
| GSE7333 | 6 | miRNA | miR-1-2 knockout versus wild-type hearts | download |
| GSE7342 | 12 | time course | Expression data from p38 knock out versus wild type fetal liver | download |
| GSE7348 | 6 | Treatment Comparison | Gene Expression in Naive and Tolerant Macrophages stimulated with LPS | download |
| GSE7381 | 6 | knockout and wildtype mice comparison | Expression profiling of back skin of Get1 and control mice at e18.5 | download |
| GSE7404 | 127 | time course | Comparison of Longitudinal Leukocyte Gene Expression after Burn Injury or Trauma Hemorrhage in Mice | download |
| GSE7407 | 4 | Gene expression comparison | Regulation of Gene Expression by Sirt1 in the heart | download |
| GSE7424 | 8 | transplntation tolerance | Intragraft gene expression profile associated with the induction of tolerance | download |
| GSE7430 | 12 | Time course | Investigate the role of Wnt/beta-catenin signaling in development of the exocrine pancreas | download |
| GSE7764 | 10 | mRNA, mouse, NK cell, IL-15 | mRNA expression profiles of resting and IL-15 activated murine NK cells | download |
| GSE7770 | 4 | cell type comparison, development | Gene expression in thymic CD4 T cells: effects of Foxp3 | download |
| GSE7773 | 14 | SuperSeries | Foxp3-dependent programme of regulatory T-cell differentiation | download |
| GSE7784 | 12 | developmental stages | Expression profiling of double negative thymocytes | download |
| GSE7810 | 8 | comparative expression profiling | Comparative analysis of gene expression WT and Nrf2-/- mice Type II cells | download |
| GSE7823 | 9 | Differential response to hypoxia by strain | Murine Pulmonary Response to Chronic Hypoxia is Strain Specific | download |
