GO:0003729 mRNA binding

324 rno genes in this database. All gene

[QuickGO]

term: mRNA binding
goid: GO:0003729

Shaded genes do not have GeneChip data. The output was limited up to 10000.
Species Symbol Gene
coexpression		 Locus
page 		Full name* Entrez Gene ID Evidence*
rno Dhfr dihydrofolate reductase 24312 ISO,ISS
rno Myc MYC proto-oncogene, bHLH transcription factor 24577 ISO
rno Rara retinoic acid receptor, alpha 24705
rno Tp53 tumor protein p53 24842
rno Fmr1 FMRP translational regulator 1 24948 IPI,ISO,ISS
rno Ncl nucleolin 25135
rno Apobec1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 25383 IDA
rno Rps5 ribosomal protein S5 25538 IBA,IEA,ISO
rno Pkm pyruvate kinase M1/2 25630 ISO,ISS
rno Rps26 ribosomal protein S26 27139 IBA
rno Rps7 ribosomal protein S7 29258
rno Tyms thymidylate synthetase 29261 IPI
rno Rps14 ribosomal protein S14 29284
rno Rps3a ribosomal protein S3a 29288 IDA
rno Rps6 ribosomal protein S6 29304 IDA
rno Zfp36l1 zinc finger protein 36, C3H type-like 1 29344 ISO
rno Mecp2 methyl CpG binding protein 2 29386 IEA,ISO
rno Celf2 CUGBP, Elav-like family member 2 29428 IBA
rno Ptbp1 polypyrimidine tract binding protein 1 29497 IBA,IDA
rno Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 29578 IDA
rno Srsf5 serine and arginine rich splicing factor 5 29667 IBA
rno C1qbp complement C1q binding protein 29681 ISO,ISS
rno Aco1 aconitase 1 50655
rno Arc activity-regulated cytoskeleton-associated protein 54323 IDA
rno Nxf1 nuclear RNA export factor 1 59087 IEA,ISO
rno Ago2 argonaute RISC catalytic component 2 59117 ISO
rno Tsn translin 60381 ISO
rno Khdrbs3 KH RNA binding domain containing, signal transduction associated 3 64015 IBA
rno Calr calreticulin 64202 IDA,ISO
rno Rpl24 ribosomal protein L24 64307 IBA
rno Hdlbp high density lipoprotein binding protein 64474 IBA
rno Cnbp CCHC-type zinc finger, nucleic acid binding protein 64530 IBA
rno Rpl30 ribosomal protein L30 64640
rno Ireb2 iron responsive element binding protein 2 64831
rno Rida reactive intermediate imine deaminase A homolog 65151 ISO,ISS
rno Secisbp2 SECIS binding protein 2 79049
rno Hnrnpd heterogeneous nuclear ribonucleoprotein D 79256 IDA,TAS
rno Zfp36 zinc finger protein 36 79426 ISO
rno Myh10 myosin heavy chain 10 79433
rno Hnrnpl heterogeneous nuclear ribonucleoprotein L 80846 IBA
rno Mvk mevalonate kinase 81727 IDA
rno Nup98 nucleoporin 98 and 96 precursor 81738 ISO
rno Rpl5 ribosomal protein L5 81763 IDA
rno Ssb small RNA binding exonuclease protection factor La 81783
rno Cirbp cold inducible RNA binding protein 81825
rno Ptbp3 polypyrimidine tract binding protein 3 83515 IBA
rno Rps2 ribosomal protein S2 83789 ISO
rno Ybx3 Y box binding protein 3 83807
rno Slpi secretory leukocyte peptidase inhibitor 84386 ISO
rno Ilf3 interleukin enhancer binding factor 3 84472
rno Sf3b1 splicing factor 3b, subunit 1 84486 IBA
rno Tdrd7 tudor domain containing 7 85425 ISO,ISS
rno Mrps7 mitochondrial ribosomal protein S7 113958 IBA
rno Hnrnpm heterogeneous nuclear ribonucleoprotein M 116655 IBA
rno Rpl6 ribosomal protein L6 117042 IDA
rno Tra2b transformer 2 beta homolog 117259 ISO,ISS
rno Khdrbs1 KH RNA binding domain containing, signal transduction associated 1 117268 IBA
rno Hnrnpu heterogeneous nuclear ribonucleoprotein U 117280
rno Hnrnpk heterogeneous nuclear ribonucleoprotein K 117282 IBA
rno Park7 Parkinsonism associated deglycase 117287 IEA,ISO,ISS
rno Sf1 splicing factor 1 117855 IBA
rno Rpl41 ribosomal protein L41 124440
rno Rps3 ribosomal protein S3 140654 ISO
rno Rps13 ribosomal protein S13 161477 ISO
rno Khdrbs2 KH RNA binding domain containing, signal transduction associated 2 170843 IBA
rno Rbm14 RNA binding motif protein 14 170900 IBA
rno A1cf APOBEC1 complementation factor 170912 IBA,IDA
rno Marf1 meiosis regulator and mRNA stability factor 1 170946
rno Ythdc1 YTH domain containing 1 170956 IBA
rno G3bp1 G3BP stress granule assembly factor 1 171092 IBA,ISO
rno Khsrp KH-type splicing regulatory protein 171137 IBA,IEA,ISO
rno Pabpc1 poly(A) binding protein, cytoplasmic 1 171350 IDA
rno Eef1a1 eukaryotic translation elongation factor 1 alpha 1 171361 IDA
rno Scaf8 SR-related CTD-associated factor 8 245926 IBA
rno Serbp1 Serpine1 mRNA binding protein 1 246303
rno Carhsp1 calcium regulated heat stable protein 1 260416
rno Csdc2 cold shock domain containing C2 266600
rno Rnf40 ring finger protein 40 266712
rno Elavl3 ELAV like RNA binding protein 3 282824
rno Rnps1 RNA binding protein with serine rich domain 1 287113
rno Nhp2 NHP2 ribonucleoprotein 287273
rno Shmt1 serine hydroxymethyltransferase 1 287379
rno Rpl26 ribosomal protein L26 287417
rno Fxr2 FMR1 autosomal homolog 2 287433
rno Dhx33 DEAH-box helicase 33 287464 ISO
rno Taf15 TATA-box binding protein associated factor 15 287571
rno Ddx5 DEAD-box helicase 5 287765
rno Rbfox3 RNA binding fox-1 homolog 3 287847 IBA
rno Eif4g1 eukaryotic translation initiation factor 4 gamma, 1 287986 IBA,ISO
rno Rbms2 RNA binding motif, single stranded interacting protein 2 288771
rno Nanos3 nanos C2HC-type zinc finger 3 288909 IBA
rno Hnrnpc heterogeneous nuclear ribonucleoprotein C 290046 IDA,ISO
rno Gnl3 G protein nucleolar 3 290556
rno Pabpc2 poly(A) binding protein, cytoplasmic 2 291615
rno Nudt21 nudix hydrolase 21 291877 IBA,ISO,ISS
rno N4bp1 Nedd4 binding protein 1 291921 IEA,ISO
rno Eif3a eukaryotic translation initiation factor 3, subunit A 292148 IBA
rno Pabpc6 poly(A) binding protein, cytoplasmic 6 292295
rno Nova2 NOVA alternative splicing regulator 2 292681 IBA
rno Cpeb1 cytoplasmic polyadenylation element binding protein 1 293056 ISO
rno Rbm4 RNA binding motif protein 4 293663 ISO
rno RGD1308750 similar to DNA segment, Chr 19, Brigham & Womens Genetics 1357 expressed 294066 IBA
rno Pcbp3 poly(rC) binding protein 3 294336 IBA
rno Cct5 chaperonin containing TCP1 subunit 5 294864
rno Exosc9 exosome component 9 294975
rno Pabpc4l poly(A) binding protein, cytoplasmic 4-like 295010
rno Exosc8 exosome component 8 295050
rno Rbm8a RNA binding motif protein 8A 295284 IBA,ISO
rno Mettl14 methyltransferase like 14 295428 IBA,ISO
rno Secisbp2l SECIS binding protein 2-like 296115
rno Eif2s2 eukaryotic translation initiation factor 2 subunit beta 296302 IBA
rno Pabpc1l poly(A) binding protein, cytoplasmic 1-like 296351
rno Ythdf1 YTH N(6)-methyladenosine RNA binding protein 1 296467 IBA
rno Rpl35 ribosomal protein L35 296709 IBA
rno Zc3h12b zinc finger CCCH-type containing 12B 296864 IBA
rno Strap serine/threonine kinase receptor associated protein 297699 ISO
rno Rpl7 ribosomal protein L7 297755 ISO
rno Ncbp1 nuclear cap binding protein subunit 1 298075 IBA
rno Ppie peptidylprolyl isomerase E 298508 ISO
rno Pabpc4 poly(A) binding protein, cytoplasmic 4 298510 ISO
rno Eif4g3 eukaryotic translation initiation factor 4 gamma, 3 298573 IBA
rno Tardbp TAR DNA binding protein 298648
rno Raver1 ribonucleoprotein, PTB-binding 1 298705 IBA
rno Zfp36l2 zinc finger protein 36, C3H type-like 2 298765
rno Slc4a1ap solute carrier family 4 member 1 adaptor protein 298805 IBA
rno Pum2 pumilio RNA-binding family member 2 298874 IBA
rno Nova1 NOVA alternative splicing regulator 1 298992 IBA,ISO
rno Hsp90aa1 heat shock protein 90 alpha family class A member 1 299331 IDA
rno Mex3d mex-3 RNA binding family member D 299613
rno Cpsf6 cleavage and polyadenylation specific factor 6 299811 ISO
rno RGD1565117 similar to 40S ribosomal protein S26 299848 IBA
rno Shmt2 serine hydroxymethyltransferase 2 299857
rno Utp23 UTP23, small subunit processome component 299900
rno Mrpl13 mitochondrial ribosomal protein L13 299938 IBA
rno Exosc4 exosome component 4 300045
rno Celf6 CUGBP, Elav-like family member 6 300758 IBA
rno Rbm5 RNA binding motif protein 5 300996 ISO,ISS
rno Ooep oocyte expressed protein 301100 IBA
rno Dppa5 developmental pluripotency associated 5 301101 IBA,ISO
rno Srbd1 S1 RNA binding domain 1 301665 IBA
rno Zcchc13 zinc finger CCHC-type containing 13 302399 IBA
rno Nxf3 nuclear RNA export factor 3 302591 ISO
rno RGD1563104 similar to Vigilin (High density lipoprotein-binding protein) 302773 IBA
rno RGD1561230 similar to RIKEN cDNA 4921511C20 gene 302776 IBA
rno Rbmx RNA binding motif protein, X-linked 302855 ISO
rno Smptb polypyrimidine tract-binding protein 302879 IBA
rno Rsl1d1 ribosomal L1 domain containing 1 302898
rno Rbfox1 RNA binding fox-1 homolog 1 302920 IBA
rno Srrm2 serine/arginine repetitive matrix 2 302969 IBA
rno Cpeb4 cytoplasmic polyadenylation element binding protein 4 303010
rno Larp1 La ribonucleoprotein 1, translational regulator 303158
rno Ybx2 Y box binding protein 2 303250 ISO
rno Cluh clustered mitochondria homolog 303300 IBA,ISO
rno Nsrp1 nuclear speckle splicing regulatory protein 1 303346 ISO,ISS
rno Igf2bp1 insulin-like growth factor 2 mRNA binding protein 1 303477 IBA,ISO,ISS
rno Igf2bp2 insulin-like growth factor 2 mRNA binding protein 2 303824 IBA
rno Dhx9 DExH-box helicase 9 304859 ISO
rno Tpr translocated promoter region, nuclear basket protein 304862 ISO,ISS
rno Copa COPI coat complex subunit alpha 304978 ISO
rno Angel2 angel homolog 2 305035
rno G3bp2 G3BP stress granule assembly factor 2 305240 IBA
rno Rbm47 RNA binding motif protein 47 305340 IBA
rno Eif4enif1 eukaryotic translation initiation factor 4E nuclear import factor 1 305468 IBA,ISO
rno Samd4a sterile alpha motif domain containing 4A 305826 IBA
rno Piwil2 piwi-like RNA-mediated gene silencing 2 306011 ISO
rno Larp4b La ribonucleoprotein 4B 307070
rno Etf1 eukaryotic translation termination factor 1 307503
rno Celf4 CUGBP, Elav-like family member 4 307540 IBA,ISO
rno Rbmxl1 RBMX like 1 307779 ISS
rno Esrp2 epithelial splicing regulatory protein 2 307810 IBA,IEA,ISO,ISS
rno Zc3h12d zinc finger CCCH type containing 12D 308266 IBA
rno Supt5h SPT5 homolog, DSIF elongation factor subunit 308472 IBA
rno Samd4b sterile alpha motif domain containing 4B 308473 IBA,ISO
rno Nxf2 nuclear RNA export factor 2 308653 ISO
rno Cstf2t cleavage stimulation factor subunit 2, tau variant 309338 IBA
rno Cpeb3 cytoplasmic polyadenylation element binding protein 3 309510
rno Rbm20 RNA binding motif protein 20 309544 IBA
rno Noct nocturnin 310395 ISO,ISS
rno Dhx36 DEAH-box helicase 36 310461
rno Rbm46 RNA binding motif protein 46 310548 IBA
rno Ptbp2 polypyrimidine tract binding protein 2 310820 IBA,ISO
rno Rc3h2 ring finger and CCCH-type domains 2 311909 IBA,ISO
rno Luc7l2 LUC7-like 2 pre-mRNA splicing factor 312251 IBA
rno Igf2bp3 insulin-like growth factor 2 mRNA binding protein 3 312320 IBA
rno Tia1 TIA1 cytotoxic granule-associated RNA binding protein 312510
rno Ppp1r8 protein phosphatase 1, regulatory subunit 8 313030 IBA
rno Ythdf2 YTH N(6)-methyladenosine RNA binding protein 2 313053 IBA
rno Rnf20 ring finger protein 20 313216
rno Thoc2 THO complex 2 313308 IBA,ISO
rno Upf3b UPF3B, regulator of nonsense mediated mRNA decay 313449 IBA,ISO
rno Zc3h12a zinc finger CCCH type containing 12A 313587 IBA,ISO,ISS
rno Snip1 Smad nuclear interacting protein 1 313588 IBA
rno Hnrnpll heterogeneous nuclear ribonucleoprotein L-like 313842 IBA,ISO
rno Celf5 CUGBP, Elav-like family member 5 314647 IBA
rno Jrk Jrk helix-turn-helix protein 315073 ISO
rno Poldip3 DNA polymerase delta interacting protein 3 315170 IBA
rno Zc3h12c zinc finger CCCH type containing 12C 315658 IBA
rno Edc3 enhancer of mRNA decapping 3 315708 IBA
rno Larp6 La ribonucleoprotein 6, translational regulator 315731
rno Rbm15b RNA binding motif protein 15B 315988 IBA
rno Ddx3x DEAD-box helicase 3, X-linked 317335 ISO
rno Fus FUS RNA binding protein 317385
rno Rpl13a ribosomal protein L13A 317646 IBA,ISO
rno Hnrnpr heterogeneous nuclear ribonucleoprotein R 319110 IBA
rno Zar1 zygote arrest 1 353228
rno Luc7l LUC7-like 360503 IBA
rno Ncbp3 nuclear cap binding subunit 3 360563 IBA,ISO
rno Luc7l3 LUC7-like 3 pre-mRNA splicing factor 360602 IBA,ISO
rno Taco1 translational activator of cytochrome c oxidase I 360645 IEA,ISO
rno Unk unk zinc finger 360663
rno Fyttd1 forty-two-three domain containing 1 360726 IBA,IEA,ISO,ISS
rno Snrnp35 small nuclear ribonucleoprotein U11/U12 subunit 35 360803 IBA
rno Zc3h11a zinc finger CCCH-type containing 11A 360845 IBA
rno Cpeb2 cytoplasmic polyadenylation element binding protein 2 360949
rno Thoc5 THO complex 5 360972 IBA,ISO
rno Mettl3 methyltransferase-like 3 361035 ISO
rno Dcp1a decapping mRNA 1A 361109 IBA
rno Auh AU RNA binding methylglutaconyl-CoA hydratase 361215
rno Paip2 poly(A) binding protein interacting protein 2 361309 ISO
rno Fech ferrochelatase 361338
rno Lsm14a LSM14A mRNA processing body assembly factor 361554 IBA
rno Snrnp70 small nuclear ribonucleoprotein U1 subunit 70 361574 IBA
rno Pcf11 PCF11 cleavage and polyadenylation factor subunit 361605 IBA
rno Eif4g2 eukaryotic translation initiation factor 4, gamma 2 361628 IBA
rno Tial1 Tia1 cytotoxic granule-associated RNA binding protein-like 1 361655
rno Dxo decapping exoribonuclease 361799 ISO,ISS
rno Snrpc small nuclear ribonucleoprotein polypeptide C 361808 IEA
rno Srsf3 serine and arginine rich splicing factor 3 361814
rno Ythdf3 YTH N(6)-methyladenosine RNA binding protein 3 361920 IBA
rno Fxr1 FMR1 autosomal homolog 1 361927 IEA
rno Chtop chromatin target of PRMT1 361990 IBA
rno Cryz crystallin zeta 362061
rno Fubp3 far upstream element binding protein 3 362106 IBA
rno Rbms1 RNA binding motif, single stranded interacting protein 1 362138
rno Hnrnpa3 heterogeneous nuclear ribonucleoprotein A3 362152 IMP
rno Celf1 CUGBP, Elav-like family member 1 362160 IBA,ISO
rno Cstf3 cleavage stimulation factor subunit 3 362178 IBA
rno Srsf6 serine and arginine rich splicing factor 6 362264 IBA
rno Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 362361
rno Raver2 ribonucleoprotein, PTB-binding 2 362551 IBA
rno Pum1 pumilio RNA-binding family member 1 362609 IBA
rno Srsf4 serine and arginine rich splicing factor 4 362612 IBA
rno Dazap1 DAZ associated protein 1 362836
rno Rbfox2 RNA binding fox-1 homolog 2 362950 IBA,ISO
rno Eif3d eukaryotic translation initiation factor 3, subunit D 362952
rno Pcbp2 poly(rC) binding protein 2 363005 IBA
rno Syncrip synaptotagmin binding, cytoplasmic RNA interacting protein 363113 IBA
rno Nudt16 nudix hydrolase 16 363129 ISO
rno Pcbp4 poly(rC) binding protein 4 363133 IBA
rno Xpo5 exportin 5 363194 ISO
rno Elavl1 ELAV like RNA binding protein 1 363854 ISO
rno Piwil1 piwi-like RNA-mediated gene silencing 1 363912 ISO
rno Lsm1 LSM1 homolog, mRNA degradation associated 364624 IDA
rno Nanos2 nanos C2HC-type zinc finger 2 365213 IBA,ISO
rno Nanos1 nanos C2HC-type zinc finger 1 365494 IBA
rno Aqr aquarius intron-binding spliceosomal factor 366163 IBA
rno Rbm38 RNA binding motif protein 38 366262 ISO
rno Rbm25 RNA binding motif protein 25 366693 ISO
rno Cpsf1 cleavage and polyadenylation specific factor 1 366952
rno RGD1560821 similar to small nuclear ribonucleoparticle-associated protein 367865 IBA
rno Elavl4 ELAV like RNA binding protein 4 432358 IDA,ISO
rno Rbm4b RNA binding motif protein 4B 474154 IBA
rno Rbm25l1 RNA binding motif protein 25-like 1 497865 IBA
rno Srrm4 serine/arginine repetitive matrix 4 498189 ISO
rno Purb purine rich element binding protein B 498407 IEA,ISO,ISS
rno Khnyn KH and NYN domain containing 498517 IBA
rno Rbpms RNA binding protein, mRNA processing factor 498642 IBA
rno Hnrnpa0 heterogeneous nuclear ribonucleoprotein A0 498696
rno Qk quaking 499022 IBA,ISO
rno Mrps11 mitochondrial ribosomal protein S11 499185
rno Tut1 terminal uridylyl transferase 1, U6 snRNA-specific 499314
rno Pum3 pumilio RNA-binding family member 3 499339 IBA
rno Celf3 CUGBP, Elav-like family member 3 499669 IBA
rno Pcbp1 poly(rC) binding protein 1 500242 ISO
rno Eefsec eukaryotic elongation factor, selenocysteine-tRNA-specific 500255
rno Dcp1b decapping mRNA 1B 500305 IBA
rno Chtopl1 chromatin target of PRMT1-like 1 500378 IBA
rno Esrp1 epithelial splicing regulatory protein 1 500409 IBA,IEA,ISO,ISS
rno Ybx1 Y box binding protein 1 500538 IEA,IPI
rno Lin28a lin-28 homolog A 500562 ISO
rno LOC500827 similar to hypothetical protein FLJ35821 500827 IBA
rno Shfl shiftless antiviral inhibitor of ribosomal frameshifting 500956
rno Ddx6 DEAD-box helicase 6 500988 IBA
rno Boll boule homolog, RNA binding protein 501143
rno Nxf7 nuclear RNA export factor 7 501621 ISO
rno Eif2a eukaryotic translation initiation factor 2A 502531 IBA
rno Rbpms2 RNA binding protein, mRNA processing factor 2 503214 IBA,ISO
rno Fubp1 far upstream element binding protein 1 654496 IBA
rno Myef2 myelin expression factor 2 679712 IBA
rno Dnd1 DND microRNA-mediated repression inhibitor 1 679841 IBA,ISO
rno LOC679894 similar to THO complex subunit 2 (Tho2) 679894 IBA
rno Mbd2 methyl-CpG binding domain protein 2 680172 ISO
rno Dazl deleted in azoospermia-like 680486
rno Rc3h1 ring finger and CCCH-type domains 1 680586 ISO
rno Rbms3 RNA binding motif, single stranded interacting protein 3 680726
rno Slbp stem-loop binding protein 681062 IBA,ISO
rno LOC681410 hypothetical protein LOC681410 681410 IBA
rno Cstf2 cleavage stimulation factor subunit 2 683927 IBA
rno Rbm15 RNA binding motif protein 15 684233 IBA,ISO
rno Zfp385a zinc finger protein 385A 685474
rno Srrm3 serine/arginine repetitive matrix 3 685890 IBA
rno Eif4a3 eukaryotic translation initiation factor 4A3 688288 IBA,ISO
rno Pabpc5 poly A binding protein, cytoplasmic 5 688518
rno Ncbp2 nuclear cap binding protein subunit 2 689116 ISO,ISS
rno Srsf1 serine and arginine rich splicing factor 1 689890 ISO
rno Rbm24 RNA binding motif protein 24 690139
rno Alyref Aly/REF export factor 690585 IBA
rno Spen spen family transcriptional repressor 690911 IBA
rno Gemin5 gem (nuclear organelle) associated protein 5 691231
rno Mir21 microRNA 21 100314000
rno Mir124-2 microRNA 124-2 100314024 ISO
rno Mir186 microRNA 186 100314043
rno Mir874 microRNA 874 100314096
rno Mir124-3 microRNA 124-3 100314155 ISO
rno Mir23a microRNA 23a 100314228 ISO
rno Mir24-2 microRNA 24-2 100314278
rno Mir124-1 microRNA 124-1 100314291 ISO
rno LOC100361854 ribosomal protein S26-like 100361854 IBA,ISO
rno LOC100363294 stem-loop binding protein-like 100363294 IBA
rno Sf3b6 splicing factor 3B, subunit 6 100365504 ISO
rno Larp4 La ribonucleoprotein 4 100910299
rno LOC100911847 40S ribosomal protein S14-like 100911847
rno LOC100912427 nuclease-sensitive element-binding protein 1-like 100912427 ISO
rno Mirlet7g microRNA let-7g 104796557


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