KEGG 03410 Base excision repair
[list]

Species hsa(Human) mmu(Mouse) rno(Rat) gga(Chicken) dre(Zebrafish) dme(Fly) cel(Nematoda) mcc(Monkey) cfa(Dog) sce(Budding yeast) fca(Domestic cat)
UMAP
Representative coexpressed gene network LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hsa03410 Base excision repair 16
hsa03030 DNA replication 11
hsa03420 Nucleotide excision repair 7
hsa03430 Mismatch repair 5
hsa04110 Cell cycle 4
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mmu03030 DNA replication 13
mmu03410 Base excision repair 13
mmu03420 Nucleotide excision repair 8
mmu03430 Mismatch repair 6
mmu04110 Cell cycle 4
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
rno03410 Base excision repair 10
rno03030 DNA replication 6
rno03420 Nucleotide excision repair 4
rno03430 Mismatch repair 4
rno03440 Homologous recombination 3
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gga03030 DNA replication 8
gga03410 Base excision repair 8
gga03420 Nucleotide excision repair 4
gga04110 Cell cycle 3
gga03430 Mismatch repair 2
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
dre03410 Base excision repair 22
dre03030 DNA replication 14
dre03420 Nucleotide excision repair 12
dre03430 Mismatch repair 10
dre03440 Homologous recombination 7
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
dme03410 Base excision repair 12
dme03030 DNA replication 11
dme03420 Nucleotide excision repair 10
dme03430 Mismatch repair 6
dme03440 Homologous recombination 3
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cel03410 Base excision repair 9
cel03030 DNA replication 6
cel03420 Nucleotide excision repair 5
cel03430 Mismatch repair 3
cel03440 Homologous recombination 2
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mcc03030 DNA replication 10
mcc03410 Base excision repair 10
mcc03420 Nucleotide excision repair 6
mcc03430 Mismatch repair 4
mcc04110 Cell cycle 4
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cfa03410 Base excision repair 12
cfa03030 DNA replication 5
cfa03420 Nucleotide excision repair 5
cfa03430 Mismatch repair 5
cfa03440 Homologous recombination 3
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sce03030 DNA replication 10
sce03410 Base excision repair 9
sce03420 Nucleotide excision repair 7
sce03430 Mismatch repair 7
sce03440 Homologous recombination 3
LCNkegg
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
fca03410 Base excision repair 8
fca03030 DNA replication 5
fca03420 Nucleotide excision repair 4
fca03430 Mismatch repair 3
fca04217 Necroptosis 2
Gene list in the network
Symbol Function*
PARP1 poly(ADP-ribose) polymerase 1
APEX1 apurinic/apyrimidinic endodeoxyribonuclease 1
CDK4 cyclin dependent kinase 4
FEN1 flap structure-specific endonuclease 1
LIG1 DNA ligase 1
MCM2 minichromosome maintenance complex component 2
MCM3 minichromosome maintenance complex component 3
MPG N-methylpurine DNA glycosylase
MUTYH mutY DNA glycosylase
PCNA proliferating cell nuclear antigen
POLD1 DNA polymerase delta 1, catalytic subunit
POLE DNA polymerase epsilon, catalytic subunit
POLE2 DNA polymerase epsilon 2, accessory subunit
UNG uracil DNA glycosylase
XRCC1 X-ray repair cross complementing 1
TIMELESS timeless circadian regulator
MBD4 methyl-CpG binding domain 4, DNA glycosylase
PARP2 poly(ADP-ribose) polymerase 2
POLD3 DNA polymerase delta 3, accessory subunit
TOPBP1 DNA topoisomerase II binding protein 1
WDHD1 WD repeat and HMG-box DNA binding protein 1
PASK PAS domain containing serine/threonine kinase
HAUS5 HAUS augmin like complex subunit 5
POLA2 DNA polymerase alpha 2, accessory subunit
NCAPH2 non-SMC condensin II complex subunit H2
GMNN geminin DNA replication inhibitor
CEP72 centrosomal protein 72
POLD4 DNA polymerase delta 4, accessory subunit
NUDT22 nudix hydrolase 22
Symbol Function*
Fen1 flap structure specific endonuclease 1
Lig1 ligase I, DNA, ATP-dependent
Mbd4 methyl-CpG binding domain protein 4
Mcm3 minichromosome maintenance complex component 3
Mcm2 minichromosome maintenance complex component 2
Mcm5 minichromosome maintenance complex component 5
Nthl1 nth (endonuclease III)-like 1 (E.coli)
Pcna proliferating cell nuclear antigen
Pold1 polymerase (DNA directed), delta 1, catalytic subunit
Pold2 polymerase (DNA directed), delta 2, regulatory subunit
Pole polymerase (DNA directed), epsilon
Pole2 polymerase (DNA directed), epsilon 2 (p59 subunit)
Rpa2 replication protein A2
Ung uracil DNA glycosylase
Poll polymerase (DNA directed), lambda
Rnaseh2b ribonuclease H2, subunit B
Pold3 polymerase (DNA-directed), delta 3, accessory subunit
Mutyh mutY DNA glycosylase
Haus5 HAUS augmin-like complex, subunit 5
Tonsl tonsoku-like, DNA repair protein
Mms22l MMS22-like, DNA repair protein
Chtf18 CTF18, chromosome transmission fidelity factor 18
Nemp2 nuclear envelope integral membrane protein 2
Trim45 tripartite motif-containing 45
Alkbh2 alkB homolog 2, alpha-ketoglutarate-dependent dioxygenase
Symbol Function*
Nthl1 nth-like DNA glycosylase 1
Pold1 DNA polymerase delta 1, catalytic subunit
Apex1 apurinic/apyrimidinic endodeoxyribonuclease 1
Lig1 DNA ligase 1
Fen1 flap structure-specific endonuclease 1
Cdc25a cell division cycle 25A
Shmt1 serine hydroxymethyltransferase 1
Pold2 DNA polymerase delta 2, accessory subunit
Parp2 poly (ADP-ribose) polymerase 2
Pold3 DNA polymerase delta 3, accessory subunit
Ung uracil-DNA glycosylase
Mcm2 minichromosome maintenance complex component 2
Nudt5 nudix hydrolase 5
Mbd4 methyl-CpG binding domain 4 DNA glycosylase
Xndc1 Xrcc1 N-terminal domain containing 1
Symbol Function*
PCNA proliferating cell nuclear antigen
UNG uracil DNA glycosylase
HMGB1 high mobility group box 1
HMGB3 high mobility group box 3
POLE DNA polymerase epsilon, catalytic subunit
LIG3 DNA ligase 3
MCM5 minichromosome maintenance complex component 5
NUP85 nucleoporin 85
POLE2 DNA polymerase epsilon 2, accessory subunit
CDCA7 cell division cycle associated 7
MCM4 minichromosome maintenance complex component 4
ELP4 elongator acetyltransferase complex subunit 4
LIG1 DNA ligase 1
FEN1 flap structure-specific endonuclease 1
POLA2 DNA polymerase alpha 2, accessory subunit
Symbol Function*
pcna proliferating cell nuclear antigen
rrm1 ribonucleotide reductase M1 polypeptide
rpa2 replication protein A2
pole2 polymerase (DNA directed), epsilon 2
msh6 mutS homolog 6 (E. coli)
hmgb1a high mobility group box 1a
rbbp4 retinoblastoma binding protein 4
pola2 polymerase (DNA directed), alpha 2
rpa1 replication protein A1
fen1 flap structure-specific endonuclease 1
rpa3 replication protein A3
pole3 polymerase (DNA directed), epsilon 3 (p17 subunit)
unga uracil DNA glycosylase a
rfc4 replication factor C (activator 1) 4
hnrnpul1 heterogeneous nuclear ribonucleoprotein U-like 1
poll polymerase (DNA directed), lambda
apex1 APEX nuclease (multifunctional DNA repair enzyme) 1
msh2 mutS homolog 2 (E. coli)
slbp stem-loop binding protein
xrcc1 X-ray repair complementing defective repair in Chinese hamster cells 1
neil3 nei-like DNA glycosylase 3
zgc:110224 zgc:110224
rad50 RAD50 homolog, double strand break repair protein
pole polymerase (DNA directed), epsilon
pole4 polymerase (DNA-directed), epsilon 4, accessory subunit
gins2 GINS complex subunit 2
pold1 polymerase (DNA directed), delta 1, catalytic subunit
lig1 ligase I, DNA, ATP-dependent
parp1 poly (ADP-ribose) polymerase 1
hmgb3a high mobility group box 3a
si:ch211-156b7.4 si:ch211-156b7.4
lig3 ligase III, DNA, ATP-dependent
mms22l MMS22-like, DNA repair protein
blm BLM RecQ like helicase
hmgb1b high mobility group box 1b
pold2 polymerase (DNA directed), delta 2, regulatory subunit
nasp nuclear autoantigenic sperm protein (histone-binding)
parp2 poly (ADP-ribose) polymerase 2
pclaf PCNA clamp associated factor
mbd4 methyl-CpG binding domain protein 4
LOC110438871 high mobility group protein B1-like
Symbol Function*
XRCC1 XRCC1
CG8142 uncharacterized protein
Ts Thymidylate synthase
CG3430 uncharacterized protein
Pol32 Pol32 polymerase delta subunit
Orc6 Origin recognition complex subunit 6
Fen1 Flap endonuclease 1
PCNA Proliferating cell nuclear antigen
CG11788 uncharacterized protein
Mes4 Mesoderm-expressed 4
DNAlig1 DNA ligase 1
Pol31 Pol31 polymerase delta subunit
DNApol-epsilon58 DNA polymerase epsilon 58kD subunit
CG3448 uncharacterized protein
DNApol-delta DNA polymerase delta
DNAlig3 DNA ligase 3
timeout timeout
DNApol-epsilon255 DNA polymerase epsilon 255kD subunit
Chrac-14 Chromatin accessibility complex 14kD protein
Symbol Function*
crn-1 Flap endonuclease 1
exo-3 DNA-(apurinic or apyrimidinic site) endonuclease
apn-1 Apurinic-apyrimidinic endonuclease
R05H5.3 Thioredoxin domain-containing protein
ccdc-55 Nuclear speckle splicing regulatory protein 1 homolog
T26A5.8 CBFD_NFYB_HMF domain-containing protein
ung-1 Uracil-DNA glycosylase
pcn-1 Proliferating cell nuclear antigen
pole-2 putative DNA polymerase epsilon subunit 2
F12F6.7 putative DNA polymerase delta small subunit
R04F11.3 DNA polymerase delta subunit 3
T07F10.3 Uncharacterized protein
Symbol Function*
RFC5 replication factor C subunit 5
POLE DNA polymerase epsilon, catalytic subunit
POLE3 DNA polymerase epsilon 3, accessory subunit
MUTYH mutY DNA glycosylase
UNG uracil DNA glycosylase
MCM6 minichromosome maintenance complex component 6
MCM3 minichromosome maintenance complex component 3
MCM2 minichromosome maintenance complex component 2
XRCC1 X-ray repair cross complementing 1
POLD4 DNA polymerase delta 4, accessory subunit
RRM1 ribonucleotide reductase catalytic subunit M1
PCNA proliferating cell nuclear antigen
LIG1 DNA ligase 1
MPG N-methylpurine DNA glycosylase
FEN1 flap structure-specific endonuclease 1
ZNF76 zinc finger protein 76
Symbol Function*
HMGB1 high mobility group box 1
EBNA1BP2 EBNA1 binding protein 2
PARP2 poly(ADP-ribose) polymerase 2
POLD3 DNA polymerase delta 3, accessory subunit
PCNA proliferating cell nuclear antigen
PARP4 poly(ADP-ribose) polymerase family member 4
APEX1 apurinic/apyrimidinic endodeoxyribonuclease 1
POLD2 DNA polymerase delta 2, accessory subunit
CENPJ centromere protein J
HMGB2 high mobility group box 2
LIG3 DNA ligase 3
POLD1 DNA polymerase delta 1, catalytic subunit
NEIL1 nei like DNA glycosylase 1
RCCD1 RCC1 domain containing 1
LIG1 DNA ligase 1
APEX2 apurinic/apyrimidinic endodeoxyribonuclease 2
ARF1 ADP ribosylation factor 1
Symbol Function*
CDC45 DNA replication initiation factor CDC45
CDC9 DNA ligase (ATP) CDC9
POL3 DNA-directed DNA polymerase delta POL3
MSH6 mismatch repair ATPase MSH6
POL30 proliferating cell nuclear antigen
POL31 DNA-directed DNA polymerase delta subunit POL31
POL32 DNA polymerase delta subunit POL32
RAD27 multifunctional nuclease RAD27
PRI2 DNA primase subunit PRI2
MSH2 mismatch repair ATPase MSH2
OGG1 8-oxoguanine glycosylase OGG1
POL2 DNA polymerase epsilon catalytic subunit
POL1 DNA-directed DNA polymerase alpha catalytic subunit POL1
DPB2 DNA polymerase epsilon noncatalytic subunit
YHR127W uncharacterized protein
Symbol Function*
ZNF428 zinc finger protein 428
PCNA proliferating cell nuclear antigen
TONSL tonsoku like, DNA repair protein
PARP1 poly(ADP-ribose) polymerase 1
FEN1 flap structure-specific endonuclease 1
POLD1 DNA polymerase delta 1, catalytic subunit
HMGB1 high mobility group box 1
GINS1 GINS complex subunit 1
VRK1 VRK serine/threonine kinase 1
POLE2 DNA polymerase epsilon 2, accessory subunit
LIG1 DNA ligase 1
DTYMK deoxythymidylate kinase
APEX1 apurinic/apyrimidinic endodeoxyribonuclease 1


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