KEGG 03008 Ribosome biogenesis in eukaryotes

109  hsa genes in this database.
121  mmu genes in this database.
87  rno genes in this database.
72  gga genes in this database.
77  dre genes in this database.
194  dme genes in this database.
83  cel genes in this database.
91  mcc genes in this database.
81  cfa genes in this database.
90  sce genes in this database.
117  spo genes in this database.
81  fca genes in this database.

List of genes in hsa


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
1457 , N CSNK2A1 casein kinase 2 alpha 1
1459 , N CSNK2A2 casein kinase 2 alpha 2
1460 , S CSNK2B casein kinase 2 beta
1736 , Y DKC1 dyskerin pseudouridine synthase 1
2091 , N FBL fibrillarin
3692 , Y_N EIF6 eukaryotic translation initiation factor 6
4549 , RNR1
4550 , RNR2
4809 , Y SNU13 small nuclear ribonucleoprotein 13
4931 , Y_N NVL nuclear VCP like
5822 , M PWP2 PWP2 small subunit processome component
5901 , M RAN RAN, member RAS oncogene family
6023 , RMRP RNA component of mitochondrial RNA processing endoribonuclease
6949 , N TCOF1 treacle ribosome biogenesis factor 1
7514 , Y XPO1 exportin 1
9724 , N UTP14C UTP14C small subunit processome component
9790 , Y_N BMS1 BMS1 ribosome biogenesis factor
10171 , Y RCL1 RNA terminal phosphate cyclase like 1
10199 , N MPHOSPH10 M-phase phosphoprotein 10
10248 , N POP7 POP7 homolog, ribonuclease P/MRP subunit
10436 , N EMG1 EMG1 N1-specific pseudouridine methyltransferase
10482 , N NXF1 nuclear RNA export factor 1
10528 , N NOP56 NOP56 ribonucleoprotein
10556 , Y RPP30 ribonuclease P/MRP subunit p30
10557 , M RPP38 ribonuclease P/MRP subunit p38
10607 , Y TBL3 transducin beta like 3
10775 , Y POP4 POP4 homolog, ribonuclease P/MRP subunit
10799 , N RPP40 ribonuclease P/MRP subunit p40
10813 , N UTP14A UTP14A small subunit processome component
10885 , Y WDR3 WD repeat domain 3
10940 , N POP1 POP1 homolog, ribonuclease P/MRP subunit
22803 , N XRN2 5'-3' exoribonuclease 2
23160 , Y WDR43 WD repeat domain 43
23195 , P MDN1 midasin AAA ATPase 1
23560 , Y GTPBP4 GTP binding protein 4
25996 , Y REXO2 RNA exonuclease 2
26354 , N GNL3 G protein nucleolar 3
26851 , SNORD3B-1 small nucleolar RNA, C/D box 3B-1
27341 , M RRP7A ribosomal RNA processing 7 homolog A
28987 , Y NOB1 NIN1 (RPN12) binding protein 1 homolog
29102 , N DROSHA drosha ribonuclease III
29107 , N NXT1 nuclear transport factor 2 like export factor 1
29889 , N GNL2 G protein nucleolar 2
51068 , Y NMD3 NMD3 ribosome export adaptor
51077 , S FCF1 FCF1 rRNA-processing protein
51096 , N UTP18 UTP18 small subunit processome component
51119 , M SBDS SBDS ribosome maturation factor
51367 , S POP5 POP5 homolog, ribonuclease P/MRP subunit
51602 , Y NOP58 NOP58 ribonucleoprotein
54433 , Y GAR1 GAR1 ribonucleoprotein
54464 , N XRN1 5'-3' exoribonuclease 1
54552 , N GNL3L G protein nucleolar 3 like
54913 , Y_N RPP25 ribonuclease P and MRP subunit p25
55127 , P HEATR1 HEAT repeat containing 1
55131 , N RBM28 RNA binding motif protein 28
55226 , M NAT10 N-acetyltransferase 10
55272 , Y_N IMP3 IMP U3 small nucleolar ribonucleoprotein 3
55341 , M LSG1 large 60S subunit nuclear export GTPase 1
55505 , Y NOP10 NOP10 ribonucleoprotein
55651 , Y NHP2 NHP2 ribonucleoprotein
55781 , Y RIOK2 RIO kinase 2
55813 , Y UTP6 UTP6 small subunit processome component
55916 , N NXT2 nuclear transport factor 2 like export factor 2
56000 , N NXF3 nuclear RNA export factor 3
56001 , Y_N NXF2 nuclear RNA export factor 2
57455 , N REXO1 RNA exonuclease 1 homolog
65083 , Y NOL6 nucleolar protein 6
79631 , Y EFL1 elongation factor like GTPase 1
81691 , Y REXO5 RNA exonuclease 5
83732 , N RIOK1 RIO kinase 1
84128 , N WDR75 WD repeat domain 75
84135 , Y UTP15 UTP15 small subunit processome component
84916 , N UTP4 UTP4 small subunit processome component
92856 , N IMP4 IMP U3 small nucleolar ribonucleoprotein 4
134430 , S WDR36 WD repeat domain 36
138716 , N RPP25L ribonuclease P/MRP subunit p25 like
166378 , M SPATA5 spermatogenesis associated 5
283106 , N CSNK2A3 casein kinase 2 alpha 3
345630 , N FBLL1 fibrillarin like 1
728343 , Y_N NXF2B nuclear RNA export factor 2B
780851 , SNORD3A small nucleolar RNA, C/D box 3A
780852 , SNORD3B-2 small nucleolar RNA, C/D box 3B-2
780853 , SNORD3C small nucleolar RNA, C/D box 3C
100008587 , RNA5-8SN5 RNA, 5.8S ribosomal N5
100169751 , RNA5S1 RNA, 5S ribosomal 1
100169753 , RNA5S2 RNA, 5S ribosomal 2
100169754 , RNA5S3 RNA, 5S ribosomal 3
100169755 , RNA5S4 RNA, 5S ribosomal 4
100169756 , RNA5S5 RNA, 5S ribosomal 5
100169757 , RNA5S6 RNA, 5S ribosomal 6
100169758 , RNA5S7 RNA, 5S ribosomal 7
100169759 , RNA5S8 RNA, 5S ribosomal 8
100169760 , RNA5S9 RNA, 5S ribosomal 9
100169761 , RNA5S10 RNA, 5S ribosomal 10
100169762 , RNA5S11 RNA, 5S ribosomal 11
100169763 , RNA5S12 RNA, 5S ribosomal 12
100169764 , RNA5S13 RNA, 5S ribosomal 13
100169765 , RNA5S14 RNA, 5S ribosomal 14
100169766 , RNA5S15 RNA, 5S ribosomal 15
100169767 , RNA5S16 RNA, 5S ribosomal 16
100169768 , RNA5S17 RNA, 5S ribosomal 17
101929601 , N LOC101929601 putative exonuclease GOR
101929627 , N LOC101929627 putative exonuclease GOR
102157402 , Y AK6 adenylate kinase 6
106632260 , RNA5-8SN1 RNA, 5.8S ribosomal N1
109617015 , SNORD3E small nucleolar RNA, C/D box 3E
109864274 , RNA5-8SN4 RNA, 5.8S ribosomal N4
109864281 , RNA5-8SN2 RNA, 5.8S ribosomal N2
109910381 , RNA5-8SN3 RNA, 5.8S ribosomal N3


List of genes in mmu


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
12995 , N Csnk2a1 casein kinase 2, alpha 1 polypeptide
13000 , N Csnk2a2 casein kinase 2, alpha prime polypeptide
13001 , S Csnk2b casein kinase 2, beta polypeptide
14000 , N Drosha drosha, ribonuclease type III
14113 , N Fbl fibrillarin
14791 , N Emg1 EMG1 N1-specific pseudouridine methyltransferase
16418 , S Eif6 eukaryotic translation initiation factor 6
17724 , mt-Rnr1
17725 , mt-Rnr2
19384 , Y Ran RAN, member RAS oncogene family
19428 , Y Rasl2-9 RAS-like, family 2, locus 9
19782 , Rmrp RNA component of mitochondrial RNAase P
19804 , Rn5s 5S RNA
19850 , Snord3a small nucleolar RNA, C/D box 3A
19858 , Snord3b1 small nucleolar RNA, C/D box 3B1
19859 , Snord3b2 small nucleolar RNA, C/D box 3B2
19860 , Snord3b3 small nucleolar RNA, C/D box 3B3
19861 , Snord3b4 small nucleolar RNA, C/D box 3B4
20826 , Y Snu13 SNU13 homolog, small nuclear ribonucleoprotein (U4/U6.U5)
21453 , N Tcof1 treacle ribosome biogenesis factor 1
21771 , N Utp4 UTP4 small subunit processome component
24127 , N Xrn1 5'-3' exoribonuclease 1
24128 , Y Xrn2 5'-3' exoribonuclease 2
27993 , N Imp4 IMP4, U3 small nucleolar ribonucleoprotein
30877 , N Gnl3 guanine nucleotide binding protein-like 3 (nucleolar)
52530 , Y Nhp2 NHP2 ribonucleoprotein
53319 , P Nxf1 nuclear RNA export factor 1
54364 , Y Rpp30 ribonuclease P/MRP 30 subunit
55989 , Y Nop58 NOP58 ribonucleoprotein
56488 , N Nxt1 NTF2-related export protein 1
57815 , Y Spata5 spermatogenesis associated 5
59028 , M Rcl1 RNA terminal phosphate cyclase-like 1
66161 , Y Pop4 processing of precursor 4, ribonuclease P/MRP family, (S. cerevisiae)
66181 , Y Nop10 NOP10 ribonucleoprotein
66711 , M Sbds SBDS ribosome maturation factor
66932 , N Rexo1 REX1, RNA exonuclease 1
67045 , N Riok2 RIO kinase 2
67134 , N Nop56 NOP56 ribonucleoprotein
67459 , N Nvl nuclear VCP-like
67619 , Y Nob1 NIN1/RPN12 binding protein 1 homolog
67724 , N Pop1 processing of precursor 1, ribonuclease P/MRP family, (S. cerevisiae)
67973 , N Mphosph10 M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)
68147 , Y Gar1 GAR1 ribonucleoprotein
68272 , N Rbm28 RNA binding motif protein 28
69237 , Y Gtpbp4 GTP binding protein 4
69961 , N Rpp25l ribonuclease P/MRP 25 subunit-like
71340 , N Riok1 RIO kinase 1
72515 , Y Wdr43 WD repeat domain 43
72554 , N Utp14a UTP14A small subunit processome component
73674 , Y_N Wdr75 WD repeat domain 75
73736 , Y Fcf1 FCF1 rRNA processing protein
74097 , Y Pop7 processing of precursor 7, ribonuclease P family, (S. cerevisiae)
74778 , N Rrp7a ribosomal RNA processing 7 homolog A
75471 , Y 1700009N14Rik RIKEN cDNA 1700009N14 gene
83454 , N Nxf2 nuclear RNA export factor 2
97112 , Y Nmd3 NMD3 ribosome export adaptor
98956 , Y Nat10 N-acetyltransferase 10
100019 , P Mdn1 midasin AAA ATPase 1
101592 , Y Efl1 elongation factor like GTPase 1
102462 , Y_N Imp3 IMP3, U3 small nucleolar ribonucleoprotein
102614 , N Rpp25 ribonuclease P/MRP 25 subunit
103573 , Y Xpo1 exportin 1
104444 , M Rexo2 RNA exonuclease 2
105372 , Y Utp15 UTP15 small subunit processome component
110816 , N Pwp2 PWP2 periodic tryptophan protein homolog (yeast)
117109 , S Pop5 processing of precursor 5, ribonuclease P/MRP family (S. cerevisiae)
170722 , N Nxf7 nuclear RNA export factor 7
195434 , N Utp14b UTP14B small subunit processome component
208366 , N Rpp40 ribonuclease P 40 subunit
213773 , Y Tbl3 transducin (beta)-like 3
213895 , N Bms1 BMS1, ribosome biogenesis factor
216987 , Y Utp6 UTP6 small subunit processome component
217109 , N Utp18 UTP18 small subunit processome component
217995 , P Heatr1 HEAT repeat containing 1
224092 , M Lsg1 large 60S subunit nuclear export GTPase 1
225348 , E Wdr36 WD repeat domain 36
227522 , M Rpp38 ribonuclease P/MRP 38 subunit
230082 , Y_N Nol6 nucleolar protein family 6 (RNA-associated)
230737 , N Gnl2 guanine nucleotide binding protein-like 2 (nucleolar)
236598 , Rn28s1 28S ribosomal RNA
237082 , S Nxt2 nuclear transport factor 2-like export factor 2
237107 , N Gnl3l guanine nucleotide binding protein-like 3 (nucleolar)-like
237730 , N Fbll1 fibrillarin-like 1
245474 , Y Dkc1 dyskeratosis congenita 1, dyskerin
245610 , N Nxf3 nuclear RNA export factor 3
269470 , N Wdr3 WD repeat domain 3
434234 , Y Rexo5 RNA exonuclease 5
790956 , Rs5-8s1 5.8S ribosomal RNA
100861471 , n-R5s100 nuclear encoded rRNA 5S 100
100861472 , n-R5s103 nuclear encoded rRNA 5S 103
100861473 , n-R5s104 nuclear encoded rRNA 5S 104
100861474 , n-R5s105 nuclear encoded rRNA 5S 105
100861475 , n-R5s108 nuclear encoded rRNA 5S 108
100861477 , n-R5s110 nuclear encoded rRNA 5S 110
100861478 , n-R5s111 nuclear encoded rRNA 5S 111
100861479 , n-R5s113 nuclear encoded rRNA 5S 113
100861480 , Gm25018 predicted gene, 25018
100861481 , n-R5s117 nuclear encoded rRNA 5S 117
100861482 , n-R5s121 nuclear encoded rRNA 5S 121
100861483 , n-R5s122 nuclear encoded rRNA 5S 122
100861484 , n-R5s123 nuclear encoded rRNA 5S 123
100861486 , n-R5s124 nuclear encoded rRNA 5S 124
100861487 , n-R5s128 nuclear encoded rRNA 5S 128
100861488 , Gm26391 predicted gene, 26391
100861489 , n-R5s133 nuclear encoded rRNA 5S 133
100861490 , n-R5s134 nuclear encoded rRNA 5S 134
100861491 , n-R5s136 nuclear encoded rRNA 5S 136
100861492 , n-R5s138 nuclear encoded rRNA 5S 138
100861493 , n-R5s139 nuclear encoded rRNA 5S 139
100861494 , Gm22109 predicted gene, 22109
100861495 , n-R5s141 nuclear encoded rRNA 5S 141
100861496 , n-R5s142 nuclear encoded rRNA 5S 142
100861497 , n-R5s143 nuclear encoded rRNA 5S 143
100861498 , n-R5s144 nuclear encoded rRNA 5S 144
100861499 , Gm25212 predicted gene, 25212
100861500 , n-R5s146 nuclear encoded rRNA 5S 146
100861501 , Gm22291 predicted gene, 22291
100861502 , Gm23284 predicted gene, 23284
100861503 , n-R5s149 nuclear encoded rRNA 5S 149
100861531 , Rn45s 45S pre-ribosomal RNA
102216272 , Y Ak6 adenylate kinase 6


List of genes in rno


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
24720 , Rn5s 5S RNA
59087 , Y_N Nxf1 nuclear RNA export factor 1
60373 , Y Nop58 NOP58 ribonucleoprotein
81650 , S Csnk2b casein kinase 2 beta
84509 , Y Ran RAN, member RAS oncogene family
85252 , Y Xpo1 exportin 1
114300 , Y Gtpbp4 GTP binding protein 4
116549 , N Csnk2a1 casein kinase 2 alpha 1
117241 , S Pop5 POP5 homolog, ribonuclease P/MRP subunit
170602 , mt-Rnr1
170603 , mt-Rnr2
170944 , Y Dkc1 dyskerin pseudouridine synthase 1
287120 , Y Tbl3 transducin (beta)-like 3
287273 , S Nhp2 NHP2 ribonucleoprotein
288029 , M Lsg1 large 60S subunit nuclear export GTPase 1
288564 , S Pop7 POP7 homolog, ribonuclease P/MRP subunit
288615 , M Sbds SBDS, ribosome maturation factor
289323 , N Nvl nuclear VCP-like
290556 , N Gnl3 G protein nucleolar 3
291061 , Y Riok1 RIO kinase 1
291071 , Y Rpp40 ribonuclease P/MRP subunit p40
291317 , M Rpp38 ribonuclease P/MRP subunit p38
291571 , N Tcof1 treacle ribosome biogenesis factor 1
291987 , M_N Utp4 UTP4 small subunit processome component
291996 , Y Nob1 NIN1 (RPN12) binding protein 1 homolog
292747 , N Fbl fibrillarin
292831 , Y Pop4 POP4 homolog, ribonuclease P/MRP subunit
293828 , N Mphosph10 M-phase phosphoprotein 10
295047 , N Rexo1l1-ps1 REX1, RNA exonuclease 1 homolog-like 1, pseudogene 1
296219 , Y_N Nxt1 nuclear transport factor 2-like export factor 1
298002 , N Rpp25l ribonuclease P/MRP subunit p25 like
299198 , Y Fcf1 FCF1 rRNA-processing protein
300092 , Y Snu13 small nuclear ribonucleoprotein 13
300689 , Y Rexo2 RNA exonuclease 2
300944 , N Xrn1 5'-3' exoribonuclease 1
302591 , N Nxf3 nuclear RNA export factor 3
303456 , N Utp18 UTP18 small subunit processome component
305506 , Y_N Eif6 eukaryotic translation initiation factor 6
307641 , N Csnk2a2 casein kinase 2 alpha 2
308201 , N Riok2 RIO kinase 2
308653 , Y Nxf2 nuclear RNA export factor 2
308789 , Y Efl1 elongation factor like GTPase 1
309036 , N Rexo5 RNA exonuclease 5
309301 , Y_N Rcl1 RNA terminal phosphate cyclase-like 1
310019 , Y Utp15 UTP15, small subunit processome component
310159 , N Drosha drosha ribonuclease III
310512 , Y Nmd3 NMD3 ribosome export adaptor
310720 , Y Wdr3 WD repeat domain 3
311257 , N Nat10 N-acetyltransferase 10
312182 , N Rbm28 RNA binding motif protein 28
312706 , N Emg1 EMG1 N1-specific pseudouridine methyltransferase
313163 , Y RGD1306195 similar to RAN protein
313167 , Y Nol6 nucleolar protein 6
314545 , Y Wdr75 WD repeat domain 75
314630 , N Rexo1 RNA exonuclease 1 homolog
315045 , N Pop1 POP1 homolog, ribonuclease P/MRP subunit
315352 , Y Nxt2 nuclear transport factor 2-like export factor 2
315697 , Y Imp3 IMP U3 small nucleolar ribonucleoprotein 3
315705 , N Rpp25 ribonuclease P and MRP subunit p25
316317 , N Imp4 IMP U3 small nucleolar ribonucleoprotein 4
317579 , N Utp14a UTP14A small subunit processome component
360574 , Y_N Utp6 UTP6 small subunit processome component
361262 , P Heatr1 HEAT repeat containing 1
361935 , Y Spata5 spermatogenesis associated 5
362214 , N Nop56 NOP56 ribonucleoprotein
362229 , N Xrn2 5'-3' exoribonuclease 2
362426 , N Bms1 BMS1 ribosome biogenesis factor
362498 , P Mdn1 midasin AAA ATPase 1
362593 , N Gnl2 G protein nucleolar 2
362703 , Y Wdr43 WD repeat domain 43
362967 , N Rrp7a ribosomal RNA processing 7 homolog A
363563 , N Fbll1 fibrillarin-like 1
499709 , Y Gar1 GAR1 ribonucleoprotein
501621 , N Nxf7 nuclear RNA export factor 7
680025 , N Nxf5 nuclear RNA export factor 5
685332 , Y Rpp30 ribonuclease P/MRP subunit p30
688637 , Y Wdr36 WD repeat domain 36
690297 , M Pwp2 PWP2, small subunit processome component
691534 , Y Nop10 NOP10 ribonucleoprotein
751812 , Y Rasl2-9 RAS-like, family 2, locus 9
100034253 , N Gnl3l G protein nucleolar 3 like
100359574 , Y LOC100359574 NHP2 non-histone chromosome protein 2-like 1-like
100861533 , Rn18s 18S ribosomal RNA
100861534 , Rn5-8s 5.8S ribosomal RNA
100861535 , Rn28s 28S ribosomal RNA
102238592 , Y Ak6 adenylate kinase 6
102551819 , N LOC102551819 U3 small nucleolar RNA-associated protein 14 homolog B-like


List of genes in gga


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
396193 , Y RAN RAN, member RAS oncogene family
415384 , Y MPHOSPH10 M-phase phosphoprotein 10
415467 , Y EFL1 elongation factor like GTPase 1
415609 , M WDR36 WD repeat domain 36
415626 , N CSNK2A2 casein kinase 2 alpha 2
415867 , Y_X NOB1 NIN1/PSMD8 binding protein 1 homolog
415897 , N GNL3 G protein nucleolar 3
416218 , Y NHP2 NHP2 ribonucleoprotein
416276 , N TCOF1 treacle ribosome biogenesis factor 1
416545 , M TBL3 transducin beta like 3
416973 , S POP5 POP5 homolog, ribonuclease P/MRP subunit
417388 , N UTP18 UTP18, small subunit processome component
417405 , Y UTP6 UTP6, small subunit processome component
417477 , M SBDS SBDS ribosome maturation factor
417975 , N RRP7A ribosomal RNA processing 7 homolog A
417986 , Y SNU13 SNU13 homolog, small nuclear ribonucleoprotein (U4/U6.U5)
418292 , Y EMG1 EMG1, N1-specific pseudouridine methyltransferase
419140 , S EIF6 eukaryotic translation initiation factor 6
419614 , N GNL2 G protein nucleolar 2
419761 , M REXO2 RNA exonuclease 2
420458 , Y GTPBP4 GTP binding protein 4
420530 , Y_N RPP38 ribonuclease P/MRP subunit p38
420870 , N RIOK1 RIO kinase 1
420876 , M RPP40 ribonuclease P/MRP subunit p40
420911 , N DROSHA drosha ribonuclease III
421192 , Y XPO1 exportin 1
421236 , N XRN2 5'-3' exoribonuclease 2
421295 , P WDR43 WD repeat domain 43
421326 , N NVL nuclear VCP-like
421811 , N MDN1 midasin AAA ATPase 1
422140 , N UTP14A UTP14A small subunit processome component
422196 , Y DKC1 dyskerin pseudouridine synthase 1
422346 , S NXT2 nuclear transport factor 2 like export factor 2
422665 , Y SPATA5 spermatogenesis associated 5
422697 , Y GAR1 GAR1 ribonucleoprotein
423355 , Y FCF1 FCF1 rRNA-processing protein
423633 , N BMS1 BMS1, ribosome biogenesis factor
423795 , Y RPP30 ribonuclease P/MRP subunit p30
423985 , M WDR75 WD repeat domain 75
424087 , Y NOP58 NOP58 ribonucleoprotein
424778 , N XRN1 5'-3' exoribonuclease 1
424897 , N LSG1 large 60S subunit nuclear export GTPase 1
425009 , Y NMD3 NMD3 ribosome export adaptor
425215 , M AK6 adenylate kinase 6
425567 , N POP1 POP1 homolog, ribonuclease P/MRP subunit
425734 , P HEATR1 HEAT repeat containing 1
426152 , N UTP15 UTP15, small subunit processome component
426574 , Y NOP56 NOP56 ribonucleoprotein
426609 , M NAT10 N-acetyltransferase 10
427001 , Y REXO5 RNA exonuclease 5
427222 , M RCL1 RNA terminal phosphate cyclase like 1
427278 , N RIOK2 RIO kinase 2
427403 , Y RPP25L ribonuclease P/MRP 25kDa subunit-like
427952 , M WDR3 WD repeat domain 3
428327 , N REXO1 RNA exonuclease 1 homolog
430848 , Y RPP25 ribonuclease P/MRP subunit p25
432370 , N CSNK2A1 casein kinase 2 alpha 1
768362 , M POP4 POP4 homolog, ribonuclease P/MRP subunit
769632 , N UTP4 UTP4, small subunit processome component
100857200 , N IMP4 IMP4 homolog, U3 small nucleolar ribonucleoprotein
100858366 , Y NOL6 nucleolar protein 6
100861562 , RN5S 5S ribosomal RNA
101748079 , N NXF1 nuclear RNA export factor 1
107049485 , N LOC107049485 guanine nucleotide-binding protein-like 3-like protein
107053172 , S IMP3 IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)
107055627 , M PWP2 PWP2 small subunit processome component
112530089 , LOC112530089 small nucleolar RNA U3
112530097 , LOC112530097 small nucleolar RNA U3
112530098 , LOC112530098 small nucleolar RNA U3
112530988 , S CSNK2B Casein kinase II subunit beta
112533598 , LOC112533598 5.8S ribosomal RNA
112533600 , LOC112533600 5.8S ribosomal RNA


List of genes in dre


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
30428 , S csnk2b casein kinase 2, beta polypeptide
30488 , N csnk2a2a casein kinase 2, alpha prime polypeptide a
30502 , N csnk2a1 casein kinase 2, alpha 1 polypeptide
30572 , Y ran RAN, member RAS oncogene family
140505 , mt-rnr1
140506 , mt-rnr2
266990 , N pwp2h PWP2 small subunit processome component
317637 , N wdr43 WD repeat domain 43
321058 , Y wdr3 WD repeat domain 3
321114 , Y snu13b SNU13 homolog, small nuclear ribonucleoprotein b (U4/U6.U5)
321745 , M wdr36 WD repeat domain 36
321897 , N gnl3 guanine nucleotide binding protein-like 3 (nucleolar)
321940 , N xrn2 5'-3' exoribonuclease 2
323426 , N mphosph10 M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)
323464 , N lsg1 large 60S subunit nuclear export GTPase 1
323865 , N nxf1b nuclear RNA export factor 1b
325106 , N utp15 UTP15 small subunit processome component
334050 , Y gtpbp4 GTP binding protein 4
334362 , N nol6 nucleolar protein 6 (RNA-associated)
334446 , N heatr1 HEAT repeat containing 1
368478 , Y_N wdr75 WD repeat domain 75
386850 , Y_N eif6 eukaryotic translation initiation factor 6
393107 , Y utp6 UTP6 small subunit processome component
393237 , Y imp3 IMP U3 small nucleolar ribonucleoprotein 3
393282 , Y snu13a SNU13 homolog, small nuclear ribonucleoprotein a (U4/U6.U5)
393291 , N rbm28 RNA binding motif protein 28
393617 , N nat10 N-acetyltransferase 10
393717 , M smfn small fragment nuclease
393950 , Y gar1 GAR1 homolog, ribonucleoprotein
394008 , N xrn1 5'-3' exoribonuclease 1
394096 , Y_M sbds SBDS ribosome maturation factor
394196 , M nop56 NOP56 ribonucleoprotein homolog
406268 , N riok1 RIO kinase 1 (yeast)
406275 , N fbl fibrillarin
406571 , Y utp4 UTP4 small subunit processome component
406805 , N nvl nuclear VCP like
407084 , N riok2 RIO kinase 2 (yeast)
415208 , Y zgc:86811 zgc:86811
415238 , Y rpp40 ribonuclease P/MRP 40 subunit
415254 , N zgc:86598 zgc:86598
436798 , N rpp38 ribonuclease P/MRP 38 subunit
436813 , Y rpp25l ribonuclease P/MRP 25 subunit-like
436992 , N imp4 IMP U3 small nucleolar ribonucleoprotein 4
442932 , N gnl3l guanine nucleotide binding protein-like 3 (nucleolar)-like
445388 , Y rcl1 RNA terminal phosphate cyclase-like 1
445391 , Y nop10 NOP10 ribonucleoprotein homolog (yeast)
492761 , M tbl3 transducin beta like 3
494152 , Y nop58 NOP58 ribonucleoprotein homolog (yeast)
541352 , Y rpp30 ribonuclease P/MRP 30 subunit
541421 , Y pop5 POP5 homolog, ribonuclease P/MRP subunit
541444 , Y nmd3 NMD3 ribosome export adaptor
550241 , S rrp7a ribosomal RNA processing 7 homolog A
550264 , S fcf1 FCF1 rRNA-processing protein
553241 , N bms1 BMS1 ribosome biogenesis factor
553498 , N si:dkey-251i10.3 si:dkey-251i10.3
553787 , N pop4 POP4 homolog, ribonuclease P/MRP subunit
555704 , E mdn1 midasin AAA ATPase 1
556379 , N csnk2a2b casein kinase 2, alpha prime polypeptide b
557254 , P nob1 NIN1 (RPN12) binding protein 1 homolog
558395 , Y xpo1a exportin 1 (CRM1 homolog, yeast) a
561138 , Y xpo1b exportin 1 (CRM1 homolog, yeast) b
564551 , N rexo1 REX1, RNA exonuclease 1 homolog
567505 , N drosha drosha ribonuclease III
568741 , M efl1 elongation factor like GTPase 1
613144 , Y dkc1 dyskeratosis congenita 1, dyskerin
678588 , Y emg1 EMG1 N1-specific pseudouridine methyltransferase
751719 , M nxf1a nuclear RNA export factor 1a
751738 , S nxt2 nuclear transport factor 2-like export factor 2
767797 , N utp18 UTP18 small subunit processome component
793727 , N gnl2 guanine nucleotide binding protein-like 2 (nucleolar)
799016 , P pop1 POP1 homolog, ribonuclease P/MRP subunit
100000532 , Y rpp25a ribonuclease P and MRP subunit p25, a
100003787 , Y nhp2 NHP2 ribonucleoprotein homolog (yeast)
100004610 , Y pop7 POP7 homolog, ribonuclease P/MRP subunit
100332622 , Y_N spata5 spermatogenesis associated 5
100535532 , Y csnk2a4 casein kinase 2, alpha 4 polypeptide
101885168 , Y rpp25b ribonuclease P and MRP subunit p25, b


List of genes in dme


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
31097 , N Ns3 Nucleostemin 3
31136 , N prage prage
31195 , Y Nmd3 Nonsense-mediated mRNA 3
31213 , N CG3071 uncharacterized protein
31387 , Y_N CG3527 uncharacterized protein
31475 , N Pop1 POP1 ribonuclease P/MRP subunit
31811 , Y l(1)G0020 lethal (1) G0020
31833 , Y CG7246 uncharacterized protein
31943 , Y CG2972 uncharacterized protein
32132 , S CkIIbeta Casein kinase II beta subunit
32338 , Y Rtc1 Rtc1
32935 , N pcm pacman
33843 , Y CG9107 uncharacterized protein
33960 , P l(2)k09022 lethal (2) k09022
33964 , Y Rat1 Rat1 5'-3' exoribonuclease
33966 , N nop5 nop5
34167 , Y emb embargoed
34184 , N CG13097 uncharacterized protein
34680 , Y CG5776 uncharacterized protein
35374 , Y l(2)05287 lethal (2) 05287
35574 , Y Rpp25 Ribonuclease P/MRP subunit p25
35747 , N drosha drosha
35885 , N CG30349 uncharacterized protein
35963 , Y Non1 Novel nucleolar protein 1
36019 , Y CG1671 uncharacterized protein
36135 , Y CG7637 uncharacterized protein
36144 , N CG12325 uncharacterized protein
36268 , Y CG13185 uncharacterized protein
36379 , S Ak6 Adenylate kinase 6
36831 , N wcd wicked
36976 , Y CG4866 uncharacterized protein
36989 , N Ns2 Nucleostemin 2
37300 , Y CkIIbeta2 Casein kinase II beta2 subunit
37397 , Y CG4038 uncharacterized protein
37662 , N Fib Fibrillarin
37769 , S Nxt1 NTF2-related export protein 1
37776 , Y_N eIF6 eukaryotic translation initiation factor 6
37873 , P Nop60B Nucleolar protein at 60B
37909 , Y_N Ssl Suppressor of Stellate-like
37948 , N CG4806 uncharacterized protein
38740 , N Rexo5 RNA exonuclease 5
38749 , M CG8549 uncharacterized protein
38824 , N smid smallminded
38889 , Y Pop4 POP4 ribonuclease P/MRP subunit
39309 , N RIOK1 RIO kinase 1
39666 , Y Ran-like Ran-like
39689 , N CG12301 uncharacterized protein
39774 , N l(3)72Dn lethal (3) 72Dn
39834 , N CG33158 uncharacterized protein
39904 , N CG7728 uncharacterized protein
39915 , S Pop5 POP5 ribonuclease P/MRP subunit
40884 , Y nxf4 nuclear export factor 4
41581 , Y_N CG10909 uncharacterized protein
41647 , N CG9799 uncharacterized protein
41973 , Y Mat89Ba Maternal transcript 89Ba
42060 , N Ns1 Nucleostemin 1
42196 , Y_N CG8064 uncharacterized protein
42633 , Y Nop56 Nop56
42811 , M CG10214 uncharacterized protein
43009 , N CG11920 uncharacterized protein
43046 , N RIOK2 RIO kinase 2
43333 , N CG12877 uncharacterized protein
43944 , Y sbr small bristles
44005 , Y NHP2 NHP2
44072 , Y Ran Ran
44173 , Y hoip hoi-polloi
44392 , Y Rpp30 RNaseP protein p30
46032 , Y Bka Bekka
48448 , Y CkIIalpha casein kinase IIalpha
117463 , N Ste12DOR Stellate 12D orphon
317878 , Y Nxf3 Nuclear export factor 3
2768872 , N Ste:CG33237 Ste:CG33237
2768873 , N Ste:CG33236 Ste:CG33236
2768896 , N Ste:CG33244 Ste:CG33244
2768897 , N Ste:CG33243 Ste:CG33243
2768898 , Y_N Ste:CG33242 Ste:CG33242
2768899 , N Ste:CG33241 Ste:CG33241
2768900 , N Ste:CG33240 Ste:CG33240
2768901 , N Ste:CG33239 Ste:CG33239
2768902 , Y Ste:CG33238 Ste:CG33238
2768904 , N Ste:CG33247 Ste:CG33247
2768905 , N Ste:CG33246 Ste:CG33246
2768906 , N Ste:CG33245 Ste:CG33245
3771737 , 5SrRNA:CR33375
3771742 , 5SrRNA:CR33390
3771748 , 5SrRNA:CR33420
3771787 , 5SrRNA:CR33437
3771810 , 5SrRNA:CR33361
3771820 , 5SrRNA:CR33398
3771827 , 5SrRNA:CR33418
3771831 , 5SrRNA:CR33369
3771833 , 5SrRNA:CR33442
3771834 , 5SrRNA:CR33434
3771839 , 5SrRNA:CR33410
3771862 , 5SrRNA:CR33370
3771878 , 5SrRNA:CR33411
3771889 , 5SrRNA:CR33425
3771896 , 5SrRNA:CR33449
3771903 , 5SrRNA:CR33353
3771929 , 5SrRNA:CR33357
3771930 , 5SrRNA:CR33406
3771944 , 5SrRNA:CR33383
3771950 , 5SrRNA:CR33365
3771953 , 5SrRNA:CR33438
3771961 , 5SrRNA:CR33414
3771963 , 5SrRNA:CR33430
3771978 , 5SrRNA:CR33417
3771979 , 5SrRNA:CR33397
3771980 , 5SrRNA:CR33355
3771982 , 5SrRNA:CR33433
3772001 , 5SrRNA:CR33436
3772007 , Y Rpp20 Rpp20
3772009 , 5SrRNA:CR33374
3772010 , 5SrRNA:CR33389
3772017 , 5SrRNA:CR33452
3772038 , 5SrRNA:CR33386
3772040 , 5SrRNA:CR33441
3772044 , 5SrRNA:CR33368
3772059 , 5SrRNA:CR33409
3772078 , 5SrRNA:CR33447
3772092 , 5SrRNA:CR33423
3772098 , 5SrRNA:CR33424
3772103 , 5SrRNA:CR33448
3772107 , 5SrRNA:CR33413
3772115 , 5SrRNA:CR33394
3772116 , 5SrRNA:CR33429
3772130 , snoRNA:U3:54Aa
3772131 , 5SrRNA:CR33405
3772136 , 5SrRNA:CR33360
3772142 , 5SrRNA:CR33382
3772170 , 5SrRNA:CR33364
3772184 , 5SrRNA:CR33402
3772240 , 5SrRNA:CR33367
3772241 , 5SrRNA:CR33385
3772243 , 5SrRNA:CR33396
3772252 , 5SrRNA:CR33444
3772255 , 5SrRNA:CR33408
3772260 , 5SrRNA:CR33432
3772272 , 5SrRNA:CR33446
3772284 , 5SrRNA:CR33392
3772287 , 5SrRNA:CR33377
3772295 , 5SrRNA:CR33422
3772306 , 5SrRNA:CR33354
3772307 , 5SrRNA:CR33403
3772328 , 5SrRNA:CR33380
3772343 , 5SrRNA:CR33404
3772348 , 5SrRNA:CR33401
3772352 , 5SrRNA:CR33359
3772363 , 5SrRNA:CR33381
3772377 , 5SrRNA:CR33440
3772386 , 5SrRNA:CR33378
3772388 , 5SrRNA:CR33393
3772389 , 5SrRNA:CR33412
3772398 , 5SrRNA:CR33428
3772414 , 5SrRNA:CR33388
3772417 , 5SrRNA:CR33373
3772445 , 5SrRNA:CR33427
3772455 , 5SrRNA:CR33451
3772469 , 5SrRNA:CR33366
3772478 , 5SrRNA:CR33384
3772481 , 5SrRNA:CR33443
3772510 , 5SrRNA:CR33445
3772522 , 5SrRNA:CR33421
3772528 , 5SrRNA:CR33419
3772534 , 5SrRNA:CR33399
3772543 , 5SrRNA:CR33435
3772545 , 5SrRNA:CR33379
3772551 , snoRNA:U3:54Ab
3772572 , 5SrRNA:CR33376
3772578 , 5SrRNA:CR33391
3772593 , 5SrRNA:CR33439
3772620 , 5SrRNA:CR33362
3772642 , 5SrRNA:CR33400
3772667 , 5SrRNA:CR33426
3772668 , 5SrRNA:CR33415
3772673 , 5SrRNA:CR33450
3772681 , 5SrRNA:CR33431
3772685 , 5SrRNA:CR33395
3772695 , 5SrRNA:CR33372
3772703 , 5SrRNA:CR33387
3772704 , 5SrRNA:CR33358
3772705 , 5SrRNA:CR33407
5740577 , 5.8SrRNA:CR40454
5740812 , 18SrRNA:CR41548 18S ribosomal RNA:CR41548
5740827 , Y CG40635 uncharacterized protein
7354447 , Y SteXh:CG42398 SteXh:CG42398
19893560 , lrRNA mitochondrial large ribosomal RNA
19893562 , srRNA mitochondrial small ribosomal RNA
26067166 , 18SrRNA:CR45838 18S ribosomal RNA:CR45838
26067167 , 5.8SrRNA:CR45839 5.8S ribosomal RNA:CR45839
26067169 , 18SrRNA:CR45841 18S ribosomal RNA:CR45841
26067170 , 5.8SrRNA:CR45842 5.8S ribosomal RNA:CR45842
26067172 , 28SrRNA:CR45844 28S ribosomal RNA:CR45844
26067180 , 5.8SrRNA:CR45852 5.8S ribosomal RNA:CR45852


List of genes in cel


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
171749 , N C53H9.2 CP-type G domain-containing protein
171811 , Y Y23H5B.5 U3 small nucleolar RNA-associated protein 15 homolog
171866 , N nxt-1 NTF2 domain-containing protein;NTF2-related export protein
171874 , M Y54E10BR.4 RNA-binding protein NOB1
171883 , N riok-1 Serine/threonine-protein kinase RIO1
171901 , Y nol-58 Nop domain-containing protein
172182 , Y nath-10 RNA cytidine acetyltransferase
172192 , N F27C1.6 Uncharacterized protein
172224 , Y F55F8.3 Periodic tryptophan protein 2 homolog
172420 , Y C48B6.2 Putative 40S ribosomal protein S4-like
172610 , S kin-10 Casein kinase II subunit beta
172624 , Y ngp-1 Nucleolar GTP-binding protein 2
172780 , Y F30A10.9 PINc domain-containing protein
172830 , N drsh-1 Ribonuclease 3
172838 , Y K10C3.5 Tr-type G domain-containing protein
172883 , N nola-3 Putative H/ACA ribonucleoprotein complex subunit 3
172902 , N ZC434.4 Ribosomal RNA-processing protein 7 homolog
172978 , N kin-3 Casein kinase II subunit alpha
173100 , N popl-4 POP4 domain-containing protein
173169 , N eif-6 Eukaryotic translation initiation factor 6
173322 , Y riok-2 Serine/threonine-protein kinase RIO2
173520 , Y nol-6 Nucleolar protein 6
173779 , N toe-1 HEAT repeat-containing protein 1 homolog
174038 , Y F13H8.2 WD_REPEATS_REGION domain-containing protein
174151 , Y ZK1127.5 putative RNA 3'-terminal phosphate cyclase-like protein
174329 , N nst-1 Guanine nucleotide-binding protein-like 3 homolog
174511 , S E02H1.6 Adenylate kinase isoenzyme 6 homolog
174645 , Y M28.5 NHP2-like protein 1 homolog
174974 , Y_N mac-1 Protein mac-1
175059 , N xrn-1 5'-3' exoribonuclease 1
175071 , N xrn-2 5'-3' exoribonuclease 2 homolog
175145 , N rbm-28 RNA Binding Motif protein homolog
175218 , M sbds-1 Ribosome maturation protein SBDS
175731 , N pqe-1 Putative RNA exonuclease pqe-1
175911 , N popl-1 POP ribonuclease P/MRP subunit Like
175994 , Y B0280.9 U3 small nucleolar RNA-associated protein 18 homolog
176488 , Y Y39A1A.14 Ribosomal RNA small subunit methyltransferase nep-1
176503 , Y ran-1 GTP-binding nuclear protein ran-1
176504 , Y_N K01G5.5 Putative H/ACA ribonucleoprotein complex subunit 4
176531 , Y Y48A6B.3 Putative H/ACA ribonucleoprotein complex subunit 2-like protein
176577 , M popl-5 Ribonuclease P/MRP protein subunit POP5
176636 , N Y56A3A.33 Exonuclease domain-containing protein
176646 , N Y75B8A.7 U3 small nucleolar ribonucleoprotein MPP10
176863 , Y nog-1 Nucleolar GTP-binding protein 1
176870 , Y Y66H1A.4 putative H/ACA ribonucleoprotein complex subunit 1-like protein
177349 , N H35B03.2 Uncharacterized protein
178207 , N ZK795.3 Brix domain-containing protein ZK795.3
178346 , M Y45F10D.7 Uncharacterized protein
178851 , Y_N Y61A9LA.10 Bms1-type G domain-containing protein
179116 , N C05C8.5 Exonuclease domain-containing protein
179160 , Y xpo-1 CRM1_C domain-containing protein;Importin N-terminal domain-containing protein
179411 , Y C08B6.8 Exonuclease domain-containing protein;putative oligoribonuclease
179442 , N nol-56 Nucleolar protein 56
179938 , M nxf-2 Nuclear RNA export factor 2
179999 , N fib-1 rRNA 2'-O-methyltransferase fibrillarin
186322 , Y F55F10.1 Midasin;VWFA domain-containing protein
190203 , Y Y53C12B.1 WD_REPEATS_REGION domain-containing protein
191736 , N nxf-1 Nuclear RNA export factor 1
259525 , Y ZK632.14 Alba domain-containing protein
3565801 , Y T25G3.3 60S ribosomal export protein NMD3
13183153 , rrn-1.1
13183155 , rrn-2.1
13183156 , rrn-3.1
13183158 , rrn-1.2
13215139 , T19C4.17
13217719 , rrn-4.2
13217721 , rrn-4.3
13217723 , rrn-4.4
13217724 , rrn-4.5
13217726 , rrn-4.1
13217728 , rrn-4.6
13217730 , rrn-4.7
13217732 , rrn-4.8
13217734 , rrn-4.9
13217736 , rrn-4.10
13217738 , rrn-4.11
13217740 , rrn-4.12
13217742 , rrn-4.13
13217744 , rrn-4.14
13217852 , rrn-4.15
24104875 , rrn-4.16
36805064 , N Y62E10A.24 Ribonuclease P protein subunit p20
41657018 , T19C4.11


List of genes in mcc


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
664735 , N TCOF1 treacle ribosome biogenesis factor 1
692081 , N DROSHA drosha ribonuclease III
693864 , Y_N TBL3 transducin beta like 3
693880 , Y LOC693880 nuclear RNA export factor 2-like
694461 , Y RIOK1 RIO kinase 1
694568 , M RCL1 RNA terminal phosphate cyclase like 1
695292 , M REXO2 RNA exonuclease 2
695351 , Y NXF3 nuclear RNA export factor 3
695545 , M SBDS SBDS ribosome maturation factor
695877 , N GNL3 G protein nucleolar 3
696366 , Y REXO5 RNA exonuclease 5
696537 , Y RPP30 ribonuclease P/MRP subunit p30
697559 , S POP5 POP5 homolog, ribonuclease P/MRP subunit
697982 , Y GAR1 GAR1 ribonucleoprotein
698858 , N RBM28 RNA binding motif protein 28
700044 , Y FCF1 FCF1 rRNA-processing protein
700209 , Y POP4 POP4 homolog, ribonuclease P/MRP subunit
700286 , N FBL fibrillarin
700738 , N RIOK2 RIO kinase 2
700829 , N RPP25L ribonuclease P/MRP subunit p25 like
700934 , N XRN2 5'-3' exoribonuclease 2
701373 , N GNL3L G protein nucleolar 3 like
701677 , Y NMD3 NMD3 ribosome export adaptor
701950 , Y NHP2 NHP2 ribonucleoprotein
702010 , N NVL nuclear VCP like
702144 , N IMP4 IMP U3 small nucleolar ribonucleoprotein 4
702563 , Y DKC1 dyskerin pseudouridine synthase 1
702596 , Y NOL6 nucleolar protein 6
703355 , Y BMS1 BMS1 ribosome biogenesis factor
703389 , Y_P MDN1 midasin AAA ATPase 1
703510 , N UTP14A UTP14A small subunit processome component
703573 , Y UTP15 UTP15 small subunit processome component
703625 , N FBLL1 fibrillarin like 1
703796 , Y_N RPP25 ribonuclease P and MRP subunit p25
703859 , Y NOP58 NOP58 ribonucleoprotein
704047 , Y WDR43 WD repeat domain 43
704207 , N MPHOSPH10 M-phase phosphoprotein 10
704593 , N NXT2 nuclear transport factor 2 like export factor 2
705036 , M UTP4 UTP4 small subunit processome component
705344 , Y NOB1 NIN1 (RPN12) binding protein 1 homolog
705643 , N POP1 POP1 homolog, ribonuclease P/MRP subunit
706140 , N LOC706140 nuclear RNA export factor 2
706202 , Y_N IMP3 IMP U3 small nucleolar ribonucleoprotein 3
706420 , Y WDR36 WD repeat domain 36
708052 , N UTP18 UTP18 small subunit processome component
708114 , M LSG1 large 60S subunit nuclear export GTPase 1
708283 , Y SNU13 small nuclear ribonucleoprotein 13
708640 , M SPATA5 spermatogenesis associated 5
708931 , N REXO1 RNA exonuclease 1 homolog
709104 , Y WDR75 WD repeat domain 75
709200 , Y RAN RAN, member RAS oncogene family
709602 , Y_N EIF6 eukaryotic translation initiation factor 6
709657 , N UTP14C UTP14C small subunit processome component
709873 , Y GTPBP4 GTP binding protein 4
710471 , M RRP7A ribosomal RNA processing 7 homolog A
710505 , N RPP40 ribonuclease P/MRP subunit p40
710642 , N LOC710642 ribosomal RNA-processing protein 7 homolog A-like
711846 , N NXT1 nuclear transport factor 2 like export factor 1
711960 , Y WDR3 WD repeat domain 3
712455 , N CSNK2A2 casein kinase 2 alpha 2
712859 , N POP7 POP7 homolog, ribonuclease P/MRP subunit
713361 , Y UTP6 UTP6 small subunit processome component
713570 , Y EFL1 elongation factor like GTPase 1
713791 , N LOC713791 U3 small nucleolar ribonucleoprotein protein MPP10
713862 , N GNL2 G protein nucleolar 2
714421 , N LOC714421 ribonuclease P protein subunit p25-like protein
714497 , N XRN1 5'-3' exoribonuclease 1
714841 , N CSNK2A1 casein kinase 2 alpha 1
715807 , S CSNK2B casein kinase 2 beta
717452 , M NAT10 N-acetyltransferase 10
717649 , P HEATR1 HEAT repeat containing 1
718063 , Y XPO1 exportin 1
718202 , N NOP56 NOP56 ribonucleoprotein
718420 , N NXF1 nuclear RNA export factor 1
720371 , Y LOC720371 exonuclease GOR-like
722122 , Y EMG1 EMG1 N1-specific pseudouridine methyltransferase
722216 , M PWP2 PWP2 small subunit processome component
100423692 , Y AK6 adenylate kinase 6
100429345 , N RPP38 ribonuclease P/MRP subunit p38
106992388 , Y LOC106992388 U3 small nucleolar ribonucleoprotein protein MPP10
106995551 , Y_N LOC106995551 ribosome biogenesis protein BMS1 homolog
106995720 , Y_N LOC106995720 ribosome biogenesis protein BMS1 homolog
106996413 , Y LOC106996413 ribosome biogenesis protein BMS1 homolog
109910386 , LOC109910386 RNA, 5.8S ribosomal
114673268 , LOC114673268 5.8S ribosomal RNA
114673351 , LOC114673351 small nucleolar RNA U3
114673352 , LOC114673352 small nucleolar RNA U3
114675698 , LOC114675698 small nucleolar RNA U3
114675699 , LOC114675699 small nucleolar RNA U3
114676082 , N LOC114676082 ribosome biogenesis protein BMS1 homolog
114680422 , M LOC114680422 exonuclease GOR


List of genes in cfa


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
403592 , N TCOF1 treacle ribosome biogenesis factor 1
474484 , Y SNU13 small nuclear ribonucleoprotein 13
474609 , Y XPO1 exportin 1
474644 , Y NHP2 NHP2 ribonucleoprotein
474844 , S CSNK2B casein kinase 2 beta
474995 , Y_P MDN1 midasin AAA ATPase 1
475203 , N RBM28 RNA binding motif protein 28
475329 , N GNL2 G protein nucleolar 2
475713 , N WDR43 WD repeat domain 43
476460 , N FBL fibrillarin
476752 , N REXO1 RNA exonuclease 1 homolog
477100 , N XRN1 5'-3' exoribonuclease 1
477132 , N NXT1 nuclear transport factor 2 like export factor 1
477133 , N XRN2 5'-3' exoribonuclease 2
477185 , N CSNK2A1 casein kinase 2 alpha 1
477210 , Y_N EIF6 eukaryotic translation initiation factor 6
477515 , S POP5 POP5 homolog, ribonuclease P/MRP subunit
477708 , Y EMG1 EMG1 N1-specific pseudouridine methyltransferase
477760 , Y_N BMS1 BMS1 ribosome biogenesis factor
477763 , Y RPP30 ribonuclease P/MRP subunit p30
478021 , Y GTPBP4 GTP binding protein 4
478098 , Y UTP15 UTP15 small subunit processome component
478108 , S CSNK2A2 casein kinase 2 alpha 2
478606 , M LSG1 large 60S subunit nuclear export GTPase 1
478709 , Y RPP40 ribonuclease P/MRP subunit p40
478713 , N RIOK1 RIO kinase 1
479061 , Y EFL1 elongation factor like GTPase 1
479147 , N RIOK2 RIO kinase 2
479192 , P HEATR1 HEAT repeat containing 1
479820 , Y REXO5 RNA exonuclease 5
480117 , N NVL nuclear VCP like
480386 , Y FCF1 FCF1 rRNA-processing protein
480616 , Y UTP6 UTP6 small subunit processome component
480933 , N GNL3L G protein nucleolar 3 like
481582 , Y NOL6 nucleolar protein 6
481586 , N RPP25L ribonuclease P/MRP subunit p25 like
481978 , N POP1 POP1 homolog, ribonuclease P/MRP subunit
483143 , Y WDR3 WD repeat domain 3
483431 , N NAT10 N-acetyltransferase 10
483780 , Y_N NXF1 nuclear RNA export factor 1
483840 , M SPATA5 spermatogenesis associated 5
486757 , N LOC486757 ribonuclease P protein subunit p25-like protein
487656 , Y_N IMP3 IMP U3 small nucleolar ribonucleoprotein 3
487790 , N PWP2 PWP2 small subunit processome component
488137 , Y NMD3 NMD3 ribosome export adaptor
488443 , N WDR75 WD repeat domain 75
488875 , M WDR36 WD repeat domain 36
489134 , N FBLL1 fibrillarin like 1
489395 , M REXO2 RNA exonuclease 2
489733 , Y NOB1 NIN1 (RPN12) binding protein 1 homolog
489738 , N UTP4 UTP4 small subunit processome component
489832 , N POP7 POP7 homolog, ribonuclease P/MRP subunit
490064 , Y TBL3 transducin beta like 3
491088 , N UTP18 UTP18 small subunit processome component
491441 , N NXF3 nuclear RNA export factor 3
492024 , N LOC492024 nuclear RNA export factor 2-like
492128 , N UTP14A UTP14A small subunit processome component
492263 , Y DKC1 dyskerin pseudouridine synthase 1
607017 , M SBDS SBDS ribosome maturation factor
607299 , Y NOP10 NOP10 ribonucleoprotein
609569 , M RRP7 ribosomal RNA processing 7 homolog
609886 , Y LOC609886 NHP2-like protein 1
610515 , S GAR1 GAR1 ribonucleoprotein
611587 , N RPP25 ribonuclease P and MRP subunit p25
612775 , N MPHOSPH10 M-phase phosphoprotein 10
612871 , N NOP56 NOP56 ribonucleoprotein
612945 , N NXT2 nuclear transport factor 2 like export factor 2
100499482 , Y RAN RAN, member RAS oncogene family
100683678 , N RPP38 ribonuclease P/MRP subunit p38
100684788 , N LOC100684788 ribonuclease P protein subunit p38-like
100685258 , N GNL3 G protein nucleolar 3
100686262 , N LOC100686262 serine/threonine-protein kinase RIO2-like
100687327 , Y_N LOC100687327 nuclear RNA export factor 2-like
100856234 , Y NOP58 NOP58 ribonucleoprotein
102152733 , N LOC102152733 RNA exonuclease 1 homolog
102152908 , Y LOC102152908 H/ACA ribonucleoprotein complex subunit DKC1-like
102314701 , Y AK6 adenylate kinase 6
111096540 , Y LOC111096540 IMP U3 small nucleolar ribonucleoprotein 4
119867648 , S LOC119867648 rRNA-processing protein FCF1 homolog
119870192 , S LOC119870192 NHP2-like protein 1
119871576 , N DROSHA drosha ribonuclease III


List of genes in sce


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
850326 , N RRP7 Rrp7p
850422 , N PWP2 snoRNA-binding rRNA-processing protein PWP2
850625 , N RIX7 putative AAA family ATPase RIX7
850709 , M SDO1 guanine nucleotide exchange factor SDO1
850748 , M REX2 Rex2p
850796 , N REA1 AAA family ATPase midasin
850797 , N REX3 RNA exonuclease
850820 , N DIP2 snoRNA-binding rRNA-processing protein DIP2
850837 , N RMP1 Rmp1p
850872 , N CBF5 pseudouridine synthase CBF5
850883 , Y_N EMG1 18S rRNA pseudouridine methyltransferase
850894 , Y_N NOP56 snoRNP complex protein NOP56
850919 , Y UTP13 Utp13p
851000 , Y GSP1 Ran GTPase GSP1
851113 , M AFG2 AAA family ATPase AFG2
851125 , P UTP21 rRNA-processing protein UTP21
851200 , N POP5 RNA-binding protein POP5
851319 , Y NHP2 snoRNA-binding protein NHP2
851388 , Y_N FAP7 nucleoside-triphosphatase
851548 , N NOP1 rRNA methyltransferase NOP1
851924 , N UTP4 Utp4p
851939 , N FCF1 rRNA-processing protein FCF1
852007 , N UTP5 Utp5p
852060 , N UTP6 snoRNA-binding rRNA-processing protein UTP6
852089 , N SNM1 Snm1p
852263 , N POP8 ribonuclease P
852465 , M POP7 ribonuclease P/MRP protein subunit POP7
852560 , N POP4 RNase P/RNase MRP complex subunit
852702 , N XRN1 chromatin-binding exonuclease XRN1
852779 , N LSG1 putative GTPase LSG1
852865 , N CKB1 casein kinase 2 regulatory subunit CKB1
852918 , N POP6 ribonuclease P/MRP protein subunit POP6
852982 , N UTP22 rRNA-processing protein UTP22
853029 , N UTP8 Utp8p
853133 , N CRM1 exportin CRM1
853193 , N RNH70 Rnh70p
853335 , N UTP10 snoRNA-binding rRNA-processing protein UTP10
853376 , N UTP18 Utp18p
853458 , N MPP10 rRNA-processing protein MPP10
853649 , Y_N MTR2 Mtr2p
854152 , M RCL1 rRNA-processing endoribonuclease
854204 , N CKB2 casein kinase 2 regulatory subunit CKB2
854213 , N RAT1 ssRNA exonuclease RAT1
854221 , N NOB1 rRNA-binding endoribonuclease
854227 , M CKA2 casein kinase 2 catalytic subunit CKA2
854286 , N RIO1 protein kinase RIO1
854357 , Y GSP2 Ran GTPase GSP2
854487 , N NOP58 RNA-processing protein NOP58
854776 , N CKA1 casein kinase 2 catalytic subunit CKA1
854881 , N UTP14 Utp14p
855118 , M UTP15 snoRNA-binding rRNA-processing protein UTP15
855280 , N RNT1 ribonuclease III
855439 , N POP3 Pop3p
855500 , N POP1 ribonuclease P/MRP protein subunit POP1
855514 , N RIO2 protein kinase RIO2
855558 , N RIA1 GTPase RIA1
855591 , N KRE33 ribosome biosynthesis protein KRE33
855649 , N IMP4 snoRNA-binding rRNA-processing protein IMP4
855789 , N NOG2 putative GTPase NOG2
855884 , N BMS1 GTPase BMS1
855897 , N HRR25 serine/threonine protein kinase HRR25
855934 , N MEX67 Mex67p
855977 , N NAN1 Nan1p
856012 , N NOG1 putative GTPase NOG1
856063 , N NOP4 mRNA-binding ribosome biosynthesis protein NOP4
856126 , Y_N TIF6 translation initiation factor 6
856459 , N RPP1 RNA-binding RNA processing protein RPP1
856471 , N NOP10 snoRNP complex protein NOP10
856489 , M GAR1 H/ACA snoRNP pseudouridylase subunit GAR1
856553 , N IMP3 snoRNA-binding rRNA-processing protein IMP3
856575 , N NMD3 ribosome-binding protein NMD3
856603 , N UTP9 Utp9p
856687 , Y SNU13 RNA binding protein SNU13
856723 , N NUG1 RNA-binding GTPase NUG1
9164906 , ICR1
9164918 , RDN5-6
9164921 , RDN25-2
9164923 , RDN18-1
9164924 , RDN5-3
9164928 , RDN5-2
9164929 , RDN5-4
9164932 , RDN18-2
9164935 , RDN25-1
9164945 , RDN5-1
9164946 , RDN5-5
9164967 , NME1
9164981 , SNR17A
9164985 , SNR17B
9164988 , 21S_RRNA
9164990 , 15S_RRNA


List of genes in spo


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
1669496 , ScpofMr11
1669500 , ScpofMr12
2538752 , Y SPCC830.11c putative nucleoside-triphosphatase
2538895 , N SPCC830.09c putative Rnase P/MRP subunit
2538975 , M SPCC16C4.05 putative Rnase P/MRP subunit
2539126 , Y tif6 translation initiation factor eIF6
2539293 , Y SPCC553.08c putative GTPase Ria1
2539299 , N SPCC1672.07 putative U3 snoRNP-associated protein Utp21
2539316 , N SPCC1450.03 putative ribonucleoprotein complex protein
2539337 , N utp13 putative U3 snoRNP-associated protein Utp13
2539491 , N SPCC737.08 putative midasin
2539536 , N SPCC16C4.19 putative RNase MRP subunit
2539853 , M rex2 putative RNA exonuclease
2539947 , N SPBC1703.01c putative Rnase P/MRP subunit
2539957 , N SPBC1703.05 putative RIO family protein kinase
2539968 , N SPBC16E9.10c putative AAA family ATPase Rix7
2540084 , N pac1 double-strand-specific ribonuclease Pac1
2540149 , Y spi1 Ran GTPase Spi1
2540218 , N SPBC32H8.04c putative rRNA processing protein Fcf1
2540284 , N utp10 putative U3 snoRNP-associated protein Utp10
2540306 , N SPBC2G5.02c putative CK2 family regulatory subunit protein
2540390 , N bms1 putative GTP-binding protein Bms1
2540469 , N grn1 GTPase Grn1
2540479 , Y fib1 fibrillarin
2540514 , Y_M utp4 putative U3 snoRNP protein Utp4
2540529 , Y_N SPBC29A3.06 putative CGI-48 family protein
2540537 , M SPBC56F2.07c putative ribosome biogenesis factor recycling AAA family ATPase
2540651 , N SPBC244.02c putative U3 snoRNP-associated protein Utp6
2540705 , M gar1 H/ACA snoRNP pseudouridylase subunit Gar1
2540718 , N hhp1 serine/threonine protein kinase Hhp1
2540727 , N mex67 nucleoporin Mex67
2540858 , M utp15 putative U3 snoRNP protein Utp15
2540871 , N SPBC4F6.14 putative RNA-binding protein
2540971 , N SPBC3D6.12 putative U3 snoRNA associated protein Dip2
2541087 , N SPBC646.10c putative U3 snoRNP protein Nop56
2541126 , Y nog1 putative GTP-binding protein Nog1
2541174 , N SPBC776.17 putative rRNA processing protein Rrp7
2541176 , N SPBC776.08c putative Nrap domain-containing protein
2541182 , N SPBC713.04c putative U3 snoRNP-associated protein Utp1
2541332 , M pop7 putative Rnase P/MRP subunit Pop7
2541448 , N SPAC1486.09 putative ribosome biogenesis protein Nob1
2541449 , N SPAC3F10.16c putative HSR1-like GTP-binding protein
2541548 , M_N SPAC25B8.16 putative Rnase P/MRP subunit
2541814 , N SPAC23G3.06 putative U3 snoRNP protein Nop58
2541929 , N hhp2 serine/threonine protein kinase Hhp2
2541972 , N cka1 serine/threonine protein kinase Cka1
2542038 , N SPAC23C11.03 putative U3 snoRNP-associated protein Mpp1
2542139 , N mra1 ribosome biogenesis protein Mra1
2542165 , M rex3 putative exonuclease Rex3
2542204 , N exo2 exonuclease II Exo2
2542217 , N SPAC1B3.13 putative U3 snoRNP-associated protein Nan1
2542319 , N nmd3 putative export adaptor Nmd3
2542351 , N SPAC57A7.06 putative U3 snoRNP protein Utp14
2542369 , Y nhp2 box H/ACA snoRNP complex subunit Nhp2
2542446 , N SPAC19A8.07c putative U3 snoRNP-associated protein Imp4
2542481 , N cbf5 putative pseudouridylate synthase Cbf5
2542514 , N imp3 putative U3 snoRNP-associated protein Imp3
2542520 , N SPAC20G8.09c putative ribosome biogenesis ATPase
2542564 , Y ckb1 CK2 family regulatory subunit Ckb1
2542636 , N nop10 putative snoRNP complex protein
2542663 , Y snu13 U3 snoRNP-associated protein Snu13
2542674 , N dhp1 5'-3' exoribonuclease Dhp1
2542777 , N SPAC6F6.03c putative ribosome export GTPase
2542923 , N SPAC10F6.10 putative RIO family protein kinase
2542936 , M SPAC12G12.06c putative rRNA processing protein
2543013 , N SPAC6C3.09 putative Rnase P subunit
2543062 , N SPAC3A12.04c putative RNase P and RNase MRP subunit p30
2543088 , N SPAC323.08 putative ribonuclease MRP complex subunit
2543388 , N utp5 putative U3 snoRNP-associated protein Utp5
2543459 , N sdo1 putative SBDS family ribosome maturation protein Sdo1
2543505 , N SPAC637.09 putative ribonuclease H70
2543644 , N nxt1 mRNA export receptor Nxt1
3361060 , SPRRNA.26
3361103 , SPRRNA.04
3361123 , SPRRNA.05
3361125 , SPRRNA.06
3361273 , N pop8 putative RNase P and RNase MRP subunit Pop8
3361390 , SPRRNA.10
3361473 , SPRRNA.14
3361487 , N crm1 importin family nuclear export receptor Crm1
5802746 , SPRRNA.29
5802751 , SPRRNA.30
5802754 , SPRRNA.31
5802772 , SPRRNA.33
5802814 , SPRRNA.41
5802824 , SPRRNA.36
5802833 , SPRRNA.38
5802858 , SPRRNA.11
5802863 , SPRRNA.12
5802900 , SPRRNA.13
5802915 , SPRRNA.15
5802918 , SPRRNA.16
5802930 , SPRRNA.17
5802935 , SPRRNA.18
5802948 , SPRRNA.19
5802950 , SPRRNA.20
9406965 , SPRRNA.34
9407007 , SPRRNA.39
9407008 , SPRRNA.28
9407146 , SPRRNA.40
9407163 , SPRRNA.24
9407164 , SPRRNA.07
9407178 , SPRRNA.03
9407227 , SPRRNA.27
9407306 , SPRRNA.35
9407315 , SPRRNA.37
14217174 , SPRRNA.42
14217228 , SPRRNA.46
14217287 , SPRRNA.45
14217299 , SPRRNA.47
14217300 , SPRRNA.48
14217302 , SPRRNA.52
14217303 , SPRRNA.50
14217304 , SPRRNA.51
14217306 , SPRRNA.43
14217307 , SPRRNA.44
14217308 , SPRRNA.49


List of genes in fca


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
101080490 , Y_N NOL6 nucleolar protein 6
101080603 , N IMP4 IMP U3 small nucleolar ribonucleoprotein 4
101080621 , N UTP14A UTP14A small subunit processome component
101080666 , Y RAN RAN, member RAS oncogene family
101081647 , Y SNU13 small nuclear ribonucleoprotein 13
101082030 , N REXO5 RNA exonuclease 5
101082058 , N RPP40 ribonuclease P/MRP subunit p40
101082175 , Y NMD3 NMD3 ribosome export adaptor
101082644 , Y_N EIF6 eukaryotic translation initiation factor 6
101083569 , N RIOK2 RIO kinase 2
101083587 , S GAR1 GAR1 ribonucleoprotein
101083700 , Y REXO2 RNA exonuclease 2
101083713 , Y RPP30 ribonuclease P/MRP subunit p30
101083909 , N TCOF1 treacle ribosome biogenesis factor 1
101084186 , N CSNK2A1 casein kinase 2 alpha 1
101084250 , Y TBL3 transducin beta like 3
101084398 , N RPP25L ribonuclease P/MRP subunit p25 like
101084532 , Y XPO1 exportin 1
101084699 , N XRN2 5'-3' exoribonuclease 2
101084881 , N RPP25 ribonuclease P and MRP subunit p25
101085055 , N RRP7A ribosomal RNA processing 7 homolog A
101085241 , P HEATR1 HEAT repeat containing 1
101085349 , N LOC101085349 rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1
101085619 , N NXT1 nuclear transport factor 2 like export factor 1
101085722 , N MPHOSPH10 M-phase phosphoprotein 10
101086116 , M WDR36 WD repeat domain 36
101086415 , M LSG1 large 60S subunit nuclear export GTPase 1
101086718 , M SPATA5 spermatogenesis associated 5
101087664 , S CSNK2B casein kinase 2 beta
101088136 , Y NHP2 NHP2 ribonucleoprotein
101088173 , Y EMG1 EMG1 N1-specific pseudouridine methyltransferase
101088669 , Y EFL1 elongation factor like GTPase 1
101089219 , M RCL1 RNA terminal phosphate cyclase like 1
101089555 , Y UTP6 UTP6 small subunit processome component
101090282 , N WDR3 WD repeat domain 3
101090496 , N NXT2 nuclear transport factor 2 like export factor 2
101090786 , N GNL2 G protein nucleolar 2
101092042 , Y_N PWP2 PWP2 small subunit processome component
101092177 , N WDR43 WD repeat domain 43
101092292 , N NXF1 nuclear RNA export factor 1
101092919 , Y LOC101092919 nuclear RNA export factor 2-like
101092921 , N GNL3 G protein nucleolar 3
101093065 , N CSNK2A2 casein kinase 2 alpha 2
101093393 , M NAT10 N-acetyltransferase 10
101093501 , N GNL3L G protein nucleolar 3 like
101093554 , N LOC101093554 RNA exonuclease 1 homolog
101093914 , Y UTP15 UTP15 small subunit processome component
101093921 , N LOC101093921 nuclear RNA export factor 2
101093980 , N POP7 POP7 homolog, ribonuclease P/MRP subunit
101094066 , N POP4 POP4 homolog, ribonuclease P/MRP subunit
101094080 , N POP1 POP1 homolog, ribonuclease P/MRP subunit
101094164 , N LOC101094164 nuclear RNA export factor 3-like
101094514 , Y GTPBP4 GTP binding protein 4
101094807 , N FBL fibrillarin
101094944 , Y RIOK1 RIO kinase 1
101095023 , Y FCF1 FCF1 rRNA-processing protein
101095173 , P MDN1 midasin AAA ATPase 1
101096046 , Y DKC1 dyskerin pseudouridine synthase 1
101096089 , Y NOP58 NOP58 ribonucleoprotein
101096526 , N UTP4 UTP4 small subunit processome component
101097088 , N XRN1 5'-3' exoribonuclease 1
101097179 , S POP5 POP5 homolog, ribonuclease P/MRP subunit
101097730 , Y_N IMP3 IMP U3 small nucleolar ribonucleoprotein 3
101098104 , Y NOB1 NIN1 (RPN12) binding protein 1 homolog
101098467 , Y NOP10 NOP10 ribonucleoprotein
101099455 , N NOP56 NOP56 ribonucleoprotein
101099727 , N RPP38 ribonuclease P/MRP subunit p38
101100321 , Y WDR75 WD repeat domain 75
101100622 , N DROSHA drosha ribonuclease III
101100630 , N RBM28 RNA binding motif protein 28
101100775 , M SBDS SBDS ribosome maturation factor
101101341 , Y_N BMS1 BMS1 ribosome biogenesis factor
101101532 , N NVL nuclear VCP like
102901700 , N UTP18 UTP18 small subunit processome component
105259665 , N LOC105259665 nuclear RNA export factor 3-like
105261118 , N REXO1 RNA exonuclease 1 homolog
109491348 , Y AK6 adenylate kinase 6
111557881 , LOC111557881 5.8S ribosomal RNA
111557945 , LOC111557945 small nucleolar RNA U3
111559205 , LOC111559205 5.8S ribosomal RNA
111559225 , LOC111559225 small nucleolar RNA U3


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