GO:0061053 somite development

77 hsa genes in this database.
88 mmu genes in this database.
88 rno genes in this database.
13 gga genes in this database.
154 dre genes in this database.
1 dme genes in this database.
2 cel genes in this database.
1 cfa genes in this database.

[QuickGO]

term: somite development
goid: GO:0061053


Shaded genes do not have GeneChip data. The output was limited up to 100 for each of species.
Species Symbol Gene
coexpression
Locus
page
Full name* Entrez Gene ID Evidence*
hsa BMPR1A bone morphogenetic protein receptor type 1A 657
hsa EP300 E1A binding protein p300 2033
hsa FOXF1 forkhead box F1 2294
hsa FOXC1 forkhead box C1 2296
hsa FOXC2 forkhead box C2 2303
hsa FRZB frizzled related protein 2487 IEA
hsa KAT2A lysine acetyltransferase 2A 2648
hsa RBPJ recombination signal binding protein for immunoglobulin kappa J region 3516
hsa IHH Indian hedgehog signaling molecule 3549 ISS
hsa LFNG LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase 3955
hsa LHX1 LIM homeobox 1 3975
hsa LRP6 LDL receptor related protein 6 4040
hsa SMAD3 SMAD family member 3 4088
hsa SMAD4 SMAD family member 4 4089
hsa MEOX1 mesenchyme homeobox 1 4222 IBA,ISS
hsa MEOX2 mesenchyme homeobox 2 4223 IBA
hsa MTHFD1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 4522 ISS
hsa MYF5 myogenic factor 5 4617
hsa MYF6 myogenic factor 6 4618
hsa NKX3-1 NK3 homeobox 1 4824
hsa ROR2 receptor tyrosine kinase like orphan receptor 2 4920
hsa PCDH8 protocadherin 8 5100
hsa PLXNA2 plexin A2 5362
hsa PPP2R3A protein phosphatase 2 regulatory subunit B''alpha 5523 ISS
hsa PRKDC protein kinase, DNA-activated, catalytic subunit 5591
hsa PSEN1 presenilin 1 5663
hsa PTCH1 patched 1 5727 IMP
hsa RAD51B RAD51 paralog B 5890 IEA
hsa RBBP6 RB binding protein 6, ubiquitin ligase 5930 IEA
hsa SFRP1 secreted frizzled related protein 1 6422
hsa SFRP2 secreted frizzled related protein 2 6423
hsa SHH sonic hedgehog signaling molecule 6469 ISS
hsa SIX1 SIX homeobox 1 6495
hsa SMO smoothened, frizzled class receptor 6608 ISS
hsa SOX11 SRY-box transcription factor 11 6664 ISS
hsa TBXT T-box transcription factor T 6862
hsa TBX6 T-box transcription factor 6 6911
hsa TCF15 transcription factor 15 6939
hsa TP53 tumor protein p53 7157
hsa WNT5A Wnt family member 5A 7474
hsa WNT11 Wnt family member 11 7481 IEA
hsa XRCC2 X-ray repair cross complementing 2 7516
hsa AXIN2 axin 2 8313
hsa TCAP titin-cap 8557
hsa ALDH1A2 aldehyde dehydrogenase 1 family member A2 8854
hsa TBX19 T-box transcription factor 19 9095
hsa TBX18 T-box transcription factor 18 9096
hsa NOG noggin 9241 IEA
hsa MED12 mediator complex subunit 12 9968
hsa ABI1 abl interactor 1 10006
hsa SEMA3C semaphorin 3C 10512
hsa DLL3 delta like canonical Notch ligand 3 10683
hsa TMED2 transmembrane p24 trafficking protein 2 10959
hsa COBL cordon-bleu WH2 repeat protein 23242
hsa POFUT1 protein O-fucosyltransferase 1 23509
hsa FOXB1 forkhead box B1 27023
hsa DLL1 delta like canonical Notch ligand 1 28514
hsa LEF1 lymphoid enhancer binding factor 1 51176
hsa SIX4 SIX homeobox 4 51804
hsa NLE1 notchless homolog 1 54475
hsa NUP133 nucleoporin 133 55746 IEA
hsa MESP1 mesoderm posterior bHLH transcription factor 1 55897
hsa POGLUT1 protein O-glucosyltransferase 1 56983
hsa MIB1 MIB E3 ubiquitin protein ligase 1 57534
hsa EPB41L5 erythrocyte membrane protein band 4.1 like 5 57669
hsa WDR19 WD repeat domain 19 57728
hsa PALB2 partner and localizer of BRCA2 79728
hsa HES7 hes family bHLH transcription factor 7 84667
hsa LOXL3 lysyl oxidase like 3 84695 ISS
hsa WNT3A Wnt family member 3A 89780
hsa RIPPLY1 ripply transcriptional repressor 1 92129
hsa RIPPLY2 ripply transcriptional repressor 2 134701
hsa MESP2 mesoderm posterior bHLH transcription factor 2 145873
hsa CRB2 crumbs cell polarity complex component 2 286204
hsa MSGN1 mesogenin 1 343930
hsa NRARP NOTCH regulated ankyrin repeat protein 441478
hsa SCX scleraxis bHLH transcription factor 642658
mmu Abi1 abl interactor 1 11308
mmu Atm ataxia telangiectasia mutated 11920
mmu Axin2 axin 2 12006
mmu Bmpr1a bone morphogenetic protein receptor, type 1A 12166
mmu Cobl cordon-bleu WH2 repeat 12808
mmu Dkk1 dickkopf WNT signaling pathway inhibitor 1 13380
mmu Dll1 delta like canonical Notch ligand 1 13388
mmu Dll3 delta like canonical Notch ligand 3 13389
mmu Foxc2 forkhead box C2 14234
mmu Kat2a K(lysine) acetyltransferase 2A 14534
mmu Gdf3 growth differentiation factor 3 14562
mmu Foxf1 forkhead box F1 15227
mmu Foxa2 forkhead box A2 15376
mmu Ihh Indian hedgehog 16147 IMP
mmu Lef1 lymphoid enhancer binding factor 1 16842
mmu Lfng LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase 16848
mmu Lhx1 LIM homeobox protein 1 16869
mmu Loxl3 lysyl oxidase-like 3 16950 IMP
mmu Lrp6 low density lipoprotein receptor-related protein 6 16974
mmu Smad3 SMAD family member 3 17127
mmu Smad4 SMAD family member 4 17128
mmu Meox1 mesenchyme homeobox 1 17285 IBA,IMP
mmu Meox2 mesenchyme homeobox 2 17286 IBA
mmu Mesp1 mesoderm posterior 1 17292
mmu Mesp2 mesoderm posterior 2 17293
mmu Foxc1 forkhead box C1 17300
mmu Myf5 myogenic factor 5 17877
mmu Myf6 myogenic factor 6 17878
mmu Nkx3-1 NK3 homeobox 1 18095
mmu Nog noggin 18121 IMP
mmu Otx2 orthodenticle homeobox 2 18424
mmu Pax1 paired box 1 18503
mmu Pcdh8 protocadherin 8 18530
mmu Plxna2 plexin A2 18845
mmu Prkdc protein kinase, DNA activated, catalytic polypeptide 19090
mmu Psen1 presenilin 1 19164
mmu Psen2 presenilin 2 19165
mmu Ptch1 patched 1 19206 IMP,ISO
mmu Rad51b RAD51 paralog B 19363 IMP
mmu Aldh1a2 aldehyde dehydrogenase family 1, subfamily A2 19378
mmu Rbbp6 retinoblastoma binding protein 6, ubiquitin ligase 19647 IMP
mmu Rbpj recombination signal binding protein for immunoglobulin kappa J region 19664
mmu Scx scleraxis 20289
mmu Sfrp2 secreted frizzled-related protein 2 20319
mmu Sema3c sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 20348
mmu Sfrp1 secreted frizzled-related protein 1 20377
mmu Frzb frizzled-related protein 20378 IEP
mmu Shh sonic hedgehog 20423 IMP
mmu Six1 sine oculis-related homeobox 1 20471
mmu Six4 sine oculis-related homeobox 4 20474
mmu Sox11 SRY (sex determining region Y)-box 11 20666 IMP
mmu T brachyury, T-box transcription factor T 20997
mmu Tbx6 T-box 6 21389
mmu Tcap titin-cap 21393
mmu Tcf15 transcription factor 15 21407
mmu Trp53 transformation related protein 53 22059
mmu Ttn titin 22138
mmu Kdm6a lysine (K)-specific demethylase 6A 22289
mmu Wnt11 wingless-type MMTV integration site family, member 11 22411 IGI
mmu Wnt3a wingless-type MMTV integration site family, member 3A 22416
mmu Wnt5a wingless-type MMTV integration site family, member 5A 22418 IGI
mmu Zeb2 zinc finger E-box binding homeobox 2 24136
mmu Ror2 receptor tyrosine kinase-like orphan receptor 2 26564
mmu Nckap1 NCK-associated protein 1 50884
mmu Msgn1 mesogenin 1 56184
mmu Tmed2 transmembrane p24 trafficking protein 2 56334
mmu Xrcc2 X-ray repair complementing defective repair in Chinese hamster cells 2 57434
mmu Med12 mediator complex subunit 12 59024
mmu Foxb1 forkhead box B1 64290
mmu Nrarp Notch-regulated ankyrin repeat protein 67122
mmu Ifitm1 interferon induced transmembrane protein 1 68713
mmu Tbx18 T-box18 76365
mmu Tbx19 T-box 19 83993
mmu Hes7 hes family bHLH transcription factor 7 84653
mmu Mthfd1 methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthase 108156 IMP
mmu Pofut1 protein O-fucosyltransferase 1 140484
mmu Wdr19 WD repeat domain 19 213081
mmu Nle1 notchless homolog 1 217011
mmu Poglut1 protein O-glucosyltransferase 1 224143
mmu Mib1 mindbomb E3 ubiquitin protein ligase 1 225164
mmu Epb41l5 erythrocyte membrane protein band 4.1 like 5 226352
mmu Palb2 partner and localizer of BRCA2 233826
mmu Nup133 nucleoporin 133 234865 IMP
mmu Crb2 crumbs family member 2 241324
mmu Smo smoothened, frizzled class receptor 319757 IMP
mmu Ep300 E1A binding protein p300 328572
mmu Ripply2 ripply transcriptional repressor 2 382089
mmu Ripply1 ripply transcriptional repressor 1 622473
rno Tp53 tumor protein p53 24842
rno Foxa2 forkhead box A2 25099
rno Smo smoothened, frizzled class receptor 25273 IEA,ISO,ISS
rno Nog noggin 25495 IEA,ISO
rno Smad3 SMAD family member 3 25631
rno Myf6 myogenic factor 6 25714
rno Axin2 axin 2 29134
rno Psen1 presenilin 1 29192
rno Meox2 mesenchyme homeobox 2 29279 IBA
rno Shh sonic hedgehog signaling molecule 29499 IEA,ISO
rno Smad4 SMAD family member 4 50554
rno Nckap1 NCK-associated protein 1 58823
rno Mthfd1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 64300 ISO
rno Wnt5a Wnt family member 5A 64566 ISO
rno Pcdh8 protocadherin 8 64865
rno Tmed2 transmembrane p24 trafficking protein 2 65165
rno Abi1 abl-interactor 1 79249
rno Bmpr1a bone morphogenetic protein receptor type 1A 81507
rno Psen2 presenilin 2 81751
rno Dll1 delta like canonical Notch ligand 1 84010
rno Ttn titin 84015
rno Sox11 SRY-box transcription factor 11 84046 ISO,ISS
rno Ihh Indian hedgehog signaling molecule 84399 ISO
rno Sfrp1 secreted frizzled-related protein 1 84402
rno Ptch1 patched 1 89830 ISO
rno Dll3 delta like canonical Notch ligand 3 114125
rno Six1 SIX homeobox 1 114634
rno Aldh1a2 aldehyde dehydrogenase 1 family, member A2 116676
rno Wnt11 Wnt family member 11 140584 ISO
rno Lef1 lymphoid enhancer binding factor 1 161452
rno Lfng LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase 170905
rno Ep300 E1A binding protein p300 170915
rno Foxc2 forkhead box C2 171356
rno Lhx1 LIM homeobox 1 257634
rno Hes7 hes family bHLH transcription factor 7 287423
rno Poglut1 protein O-glucosyltransferase 1 288091
rno Plxna2 plexin A2 289392
rno Nup133 nucleoporin 133 292085 ISO
rno Tbxt T-box transcription factor T 292301
rno Mesp2 mesoderm posterior bHLH transcription factor 2 293046
rno Palb2 partner and localizer of BRCA2 293452
rno Ifitm1 interferon induced transmembrane protein 1 293618
rno Dkk1 dickkopf WNT signaling pathway inhibitor 1 293897
rno Frzb frizzled-related protein 295691 ISO
rno Tcf15 transcription factor 15 296272
rno Sema3c semaphorin 3C 296787
rno Six4 SIX homeobox 4 299138
rno Myf5 myogenic factor 5 299766
rno Atm ATM serine/threonine kinase 300711
rno Wnt3a Wnt family member 3A 303181
rno Nle1 notchless homolog 1 303372
rno Kat2a lysine acetyltransferase 2A 303539
rno Epb41l5 erythrocyte membrane protein band 4.1 like 5 304733
rno Tbx19 T-box transcription factor 19 304935
rno Wdr19 WD repeat domain 19 305349
rno Cobl cordon-bleu WH2 repeat protein 305497
rno Otx2 orthodenticle homeobox 2 305858
rno Nkx3-1 NK3 homeobox 1 305999
rno Ror2 receptor tyrosine kinase-like orphan receptor 2 306782
rno Mib1 MIB E3 ubiquitin protein ligase 1 307594
rno Mesp1 mesoderm posterior bHLH transcription factor 1 308766
rno Rbbp6 RB binding protein 6, ubiquitin ligase 308968 ISO
rno Sfrp2 secreted frizzled-related protein 2 310552
rno Zeb2 zinc finger E-box binding homeobox 2 311071
rno Pax1 paired box 1 311505
rno Pofut1 protein O-fucosyltransferase 1 311551
rno Loxl3 lysyl oxidase-like 3 312478 ISO
rno Lrp6 LDL receptor related protein 6 312781
rno Tbx18 T-box transcription factor 18 315870
rno Prkdc protein kinase, DNA-activated, catalytic subunit 360748
rno Ripply2 ripply transcriptional repressor 2 363111
rno Meox1 mesenchyme homeobox 1 363684 IBA,ISO
rno Foxc1 forkhead box C1 364706
rno Tbx6 T-box transcription factor 6 365371
rno Crb2 crumbs cell polarity complex component 2 366031
rno Foxb1 forkhead box B1 367106
rno Nrarp Notch-regulated ankyrin repeat protein 499745
rno Xrcc2 X-ray repair cross complementing 2 499966
rno Gdf3 growth differentiation factor 3 500311
rno Rad51b RAD51 paralog B 500679 ISO
rno Rbpj recombination signal binding protein for immunoglobulin kappa J region 679028
rno Med12 mediator complex subunit 12 679693
rno Ripply1 ripply transcriptional repressor 1 680702
rno Scx scleraxis bHLH transcription factor 680712
rno Foxf1 forkhead box F1 687536
rno Tcap titin-cap 688173
rno Msgn1 mesogenin 1 689864
rno Kdm6a lysine demethylase 6A 103689969
gga SCX scleraxis bHLH transcription factor 374101
gga SMAD3 SMAD family member 3 395132
gga MSGN1 mesogenin 1 395419
gga EPHA4 EPH receptor A4 395559
gga WNT11 Wnt family member 11 395562 IEA
gga TBXT T-box transcription factor T 395782
gga LFNG LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase 395790
gga TBX19 T-box transcription factor 19 395793
gga IHH indian hedgehog 395801 IEA
gga FN1 fibronectin 1 396133
gga PTN pleiotrophin 418125
gga TGFB2 transforming growth factor beta 2 421352
gga PAX1 paired box 1 100859138
dre wnt5b wingless-type MMTV integration site family, member 5b 30105 IGI
dre dlc deltaC 30120
dre wnt8a wingless-type MMTV integration site family, member 8a 30122
dre dld deltaD 30138
dre gli2a GLI family zinc finger 2a 30154
dre chrd chordin 30161
dre dharma dharma 30170 IMP
dre tle3a TLE family member 3, transcriptional corepressor a 30206
dre efnb2a ephrin-B2a 30219
dre psen1 presenilin 1 30221 IMP
dre efna5b ephrin-A5b 30223
dre smo smoothened, frizzled class receptor 30225 IMP
dre tbx16l T-box transcription factor 16, like 30254 IGI
dre noto notochord homeobox 30260 IMP
dre tbx16 T-box transcription factor 16 30264 IGI
dre shha sonic hedgehog signaling molecule a 30269
dre her1 hairy-related 1 30287
dre her6 hairy-related 6 30288
dre cdh2 cadherin 2, type 1, N-cadherin (neuronal) 30291
dre tdgf1 teratocarcinoma-derived growth factor 1 30304 IGI
dre cyp26a1 cytochrome P450, family 26, subfamily A, polypeptide 1 30381
dre tbxta T-box transcription factor Ta 30399 IGI,IMP
dre foxd5 forkhead box D5 30524
dre fgf8a fibroblast growth factor 8a 30538 IMP
dre foxb1a forkhead box B1a 30542
dre mef2aa myocyte enhancer factor 2aa 30564
dre ephb4b eph receptor B4b 30691
dre lef1 lymphoid enhancer-binding factor 1 30701
dre igf2a insulin-like growth factor 2a 30710
dre notch1a notch receptor 1a 30718
dre foxh1 forkhead box H1 57930
dre axin1 axin 1 57931
dre psen2 presenilin 2 58026 IMP
dre notch3 notch receptor 3 58066
dre mespaa mesoderm posterior aa 58069
dre mespba mesoderm posterior ba 58070
dre her7 hairy and enhancer of split related-7 58132
dre myhz1.1 myosin, heavy polypeptide 1.1, skeletal muscle 58142
dre wnt3a wingless-type MMTV integration site family, member 3A 60632
dre epha4a eph receptor A4a 64271 IGI
dre mapk14a mitogen-activated protein kinase 14a 65237
dre dmd dystrophin 83773 IMP
dre copb2 COPI coat complex subunit beta 2 114454 IMP
dre aldh1a2 aldehyde dehydrogenase 1 family, member A2 116713
dre cxcr4a chemokine (C-X-C motif) receptor 4a 140747 IGI,IMP
dre tbx6 T-box transcription factor 6 192294 IGI,IMP
dre vangl2 VANGL planar cell polarity protein 2 245949
dre thbs3a thrombospondin 3a 252849 IGI
dre has2 hyaluronan synthase 2 260350
dre copa COPI coat complex subunit alpha 260439 IMP
dre neo1a neogenin 1a 266983
dre lamb1a laminin, beta 1a 286830 IMP
dre lamc1 laminin, gamma 1 286832 IMP
dre rap1b RAP1B, member of RAS oncogene family 321107
dre snu13b SNU13 homolog, small nuclear ribonucleoprotein b (U4/U6.U5) 321114 IMP
dre naa35 N-alpha-acetyltransferase 35, NatC auxiliary subunit 321587
dre hjv hemojuvelin BMP co-receptor 321932 IMP
dre nono non-POU domain containing, octamer-binding 321994 IMP
dre smarcd1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 323115 IMP
dre naa15a N-alpha-acetyltransferase 15, NatA auxiliary subunit a 323672
dre cav1 caveolin 1 323695
dre igf2b insulin-like growth factor 2b 324215
dre fxr1 fragile X mental retardation, autosomal homolog 1 327220
dre naa15b N-alpha-acetyltransferase 15, NatA auxiliary subunit b 334099
dre larp6a La ribonucleoprotein 6, translational regulator a 334471
dre cap1 CAP, adenylate cyclase-associated protein 1 (yeast) 334527
dre fn1b fibronectin 1b 334613
dre ptprub protein tyrosine phosphatase receptor type Ub 335096
dre loxl3b lysyl oxidase-like 3b 336266 ISS
dre aldoaa aldolase a, fructose-bisphosphate, a 336425
dre sulf1 sulfatase 1 337298
dre lamb2 laminin, beta 2 (laminin S) 337767 IMP
dre supt6h SPT6 homolog, histone chaperone and transcription elongation factor 337866
dre copb1 COPI coat complex subunit beta 1 338138 IMP
dre mib1 MIB E3 ubiquitin protein ligase 1 352910
dre pcdh10b protocadherin 10b 360138
dre ccdc80 coiled-coil domain containing 80 368419
dre tgfb2 transforming growth factor, beta 2 369194
dre bcl2l10 BCL2 like 10 373113
dre hes6 hes family bHLH transcription factor 6 373116
dre apc APC regulator of WNT signaling pathway 386762
dre rbpja recombination signal binding protein for immunoglobulin kappa J region a 386772
dre itga5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide) 386787
dre chuk component of inhibitor of nuclear factor kappa B kinase complex 393287
dre pdlim7 PDZ and LIM domain 7 393813
dre pxna paxillin a 399546
dre her12 hairy-related 12 402914
dre crim1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 404210
dre cdx1a caudal type homeobox 1a 405762
dre rbm24a RNA binding motif protein 24a 405801
dre gadd45ba growth arrest and DNA-damage-inducible, beta a 406304
dre meox1 mesenchyme homeobox 1 436723 IBA,IMP,IMP,ISS
dre naa50 N-alpha-acetyltransferase 50, NatE catalytic subunit 445229
dre rgs3a regulator of G protein signaling 3a 445235 IGI,IMP
dre calcrla calcitonin receptor-like a 445508
dre rtn4a reticulon 4a 447816 IGI
dre prrc1 proline-rich coiled-coil 1 474330
dre slc7a6os solute carrier family 7 member 6 opposite strand 492472 IMP
dre churc1 churchill domain containing 1 492508
dre gadd45bb growth arrest and DNA-damage-inducible, beta b 497646
dme byn brachyenteron 39349
cel tbx-31 Putative T-box protein 31 183272
cel tbx-32 Putative T-box protein 32 191303
cfa SFRP2 secreted frizzled related protein 2 475471


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