GO:0036002 pre-mRNA binding

59 hsa genes in this database.
37 mmu genes in this database.
38 rno genes in this database.
6 gga genes in this database.
16 dre genes in this database.
18 dme genes in this database.
11 cel genes in this database.
14 sce genes in this database.
11 spo genes in this database.

[QuickGO]

term: pre-mRNA binding
goid: GO:0036002

Shaded genes do not have GeneChip data. The output was limited up to 100 for each of species.
Species Symbol Gene
coexpression		 Locus
page 		Full name* Entrez Gene ID Evidence*
hsa DDX5 DEAD-box helicase 5 1655 IDA
hsa ELAVL4 ELAV like RNA binding protein 4 1996
hsa EP300 E1A binding protein p300 2033
hsa HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 3178 IDA
hsa HNRNPL heterogeneous nuclear ribonucleoprotein L 3191
hsa HNRNPU heterogeneous nuclear ribonucleoprotein U 3192 IBA,IDA
hsa PTBP1 polypyrimidine tract binding protein 1 5725 IDA
hsa RBM4 RNA binding motif protein 4 5936
hsa RNU1-4 RNA, U1 small nuclear 4 6060
hsa RNVU1-2A RNA, variant U1 small nuclear 2A 6063
hsa RNU2-1 RNA, U2 small nuclear 1 6066
hsa SRSF2 serine and arginine rich splicing factor 2 6427 IEA
hsa SRSF6 serine and arginine rich splicing factor 6 6431 IDA
hsa TRA2B transformer 2 beta homolog 6434 IDA
hsa SNRPC small nuclear ribonucleoprotein polypeptide C 6631
hsa SOX9 SRY-box transcription factor 9 6662
hsa TARBP2 TARBP2 subunit of RISC loading complex 6895 TAS
hsa U2AF1 U2 small nuclear RNA auxiliary factor 1 7307
hsa ZRSR2P1 ZRSR2 pseudogene 1 7310
hsa SF1 splicing factor 1 7536
hsa SLBP stem-loop binding protein 7884
hsa ZRSR2 zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2 8233
hsa RBM7 RNA binding motif protein 7 10179
hsa SLU7 SLU7 homolog, splicing factor 10569
hsa PRPF8 pre-mRNA processing factor 8 10594
hsa CELF1 CUGBP Elav-like family member 1 10658 IDA
hsa CELF2 CUGBP Elav-like family member 2 10659 IDA
hsa CELF3 CUGBP Elav-like family member 3 11189 NAS
hsa U2AF2 U2 small nuclear RNA auxiliary factor 2 11338
hsa TARDBP TAR DNA binding protein 23435
hsa RNU11 RNA, U11 small nuclear 26824
hsa RNVU1-7 RNA, variant U1 small nuclear 7 26864
hsa LSM1 LSM1 homolog, mRNA degradation associated 27257 IEA
hsa RBM41 RNA binding motif protein 41 55285
hsa RNPC3 RNA binding region (RNP1, RRM) containing 3 55599
hsa RBM22 RNA binding motif protein 22 55696 IBA,IDA
hsa CELF4 CUGBP Elav-like family member 4 56853 IDA
hsa CELF5 CUGBP Elav-like family member 5 60680 NAS
hsa ERI1 exoribonuclease 1 90459
hsa OVAAL ovarian adenocarcinoma amplified long non-coding RNA 148756
hsa U2AF1L4 U2 small nuclear RNA auxiliary factor 1 like 4 199746
hsa RBM24 RNA binding motif protein 24 221662
hsa WEE2-AS1 WEE2 antisense RNA 1 285962
hsa LOC100128988 uncharacterized LOC100128988 100128988
hsa RNU4ATAC RNA, U4atac small nuclear (U12-dependent splicing) 100151683
hsa RNU6ATAC RNA, U6atac small nuclear (U12-dependent splicing) 100151684
hsa RNVU1-8 RNA, variant U1 small nuclear 8 101447996
hsa RNVU1-4 RNA, variant U1 small nuclear 4 101954264
hsa RNVU1-14 RNA, variant U1 small nuclear 14 101954266
hsa RNVU1-15 RNA, variant U1 small nuclear 15 101954267
hsa RNVU1-20 RNA, variant U1 small nuclear 20 101954268
hsa RNVU1-17 RNA, variant U1 small nuclear 17 101954269
hsa RNVU1-3 RNA, variant U1 small nuclear 3 101954272
hsa RNVU1-1 RNA, variant U1 small nuclear 1 101954273
hsa RNVU1-6 RNA, variant U1 small nuclear 6 101954276
hsa RNVU1-19 RNA, variant U1 small nuclear 19 101954277
hsa U2AF1L5 U2 small nuclear RNA auxiliary factor 1 like 5 102724594
hsa LINC01715 long intergenic non-protein coding RNA 1715 105378616
hsa LOC107984784 uncharacterized LOC107984784 107984784
mmu Celf1 CUGBP, Elav-like family member 1 13046 ISO
mmu Ddx5 DEAD box helicase 5 13207 ISO
mmu Celf2 CUGBP, Elav-like family member 2 14007 ISO
mmu Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 15382 ISO
mmu Hnrnpk heterogeneous nuclear ribonucleoprotein K 15387
mmu Hnrnpl heterogeneous nuclear ribonucleoprotein L 15388
mmu Elavl4 ELAV like RNA binding protein 4 15572
mmu Per2 period circadian clock 2 18627 IDA
mmu Ptbp1 polypyrimidine tract binding protein 1 19205 ISO
mmu Rbm4 RNA binding motif protein 4 19653 IDA
mmu Srsf2 serine and arginine-rich splicing factor 2 20382 IDA
mmu Tra2b transformer 2 beta 20462 IDA,ISO
mmu Slbp stem-loop binding protein 20492
mmu Snrpc U1 small nuclear ribonucleoprotein C 20630
mmu Sox9 SRY (sex determining region Y)-box 9 20682
mmu Zrsr1 zinc finger (CCCH type), RNA binding motif and serine/arginine rich 1 22183
mmu Zrsr2 zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2 22184
mmu U2af2 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 22185
mmu Sf1 splicing factor 1 22668
mmu Hnrnpu heterogeneous nuclear ribonucleoprotein U 51810 IBA,ISO
mmu Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 53379
mmu Rbm22 RNA binding motif protein 22 66810 IBA,ISO
mmu Rbm7 RNA binding motif protein 7 67010
mmu Lsm1 LSM1 homolog, mRNA degradation associated 67207 ISO
mmu Rnpc3 RNA-binding region (RNP1, RRM) containing 3 67225
mmu Eri1 exoribonuclease 1 67276
mmu Srsf6 serine and arginine-rich splicing factor 6 67996 ISO
mmu Tex16 testis expressed gene 16 83556 IBA
mmu Celf4 CUGBP, Elav-like family member 4 108013 ISO
mmu U2af1 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1 108121
mmu Prpf8 pre-mRNA processing factor 8 192159
mmu Slu7 SLU7 splicing factor homolog (S. cerevisiae) 193116
mmu Tardbp TAR DNA binding protein 230908
mmu U2af1l4 U2 small nuclear RNA auxiliary factor 1-like 4 233073
mmu Rbm41 RNA binding motif protein 41 237073
mmu Ep300 E1A binding protein p300 328572
mmu Rbm24 RNA binding motif protein 24 666794
rno Celf2 CUGBP, Elav-like family member 2 29428 ISO
rno Ptbp1 polypyrimidine tract binding protein 1 29497 ISO
rno Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 29578 ISO
rno Per2 period circadian regulator 2 63840 ISO
rno Hnrnpl heterogeneous nuclear ribonucleoprotein L 80846
rno Tra2b transformer 2 beta homolog 117259 ISO
rno Hnrnpu heterogeneous nuclear ribonucleoprotein U 117280 IBA,IEA,ISO
rno Hnrnpk heterogeneous nuclear ribonucleoprotein K 117282
rno Sf1 splicing factor 1 117855
rno Sox9 SRY-box transcription factor 9 140586
rno Ep300 E1A binding protein p300 170915
rno Prpf8 pre-mRNA processing factor 8 287530
rno Ddx5 DEAD-box helicase 5 287765 ISO
rno Rbm4 RNA binding motif protein 4 293663 ISO
rno Tardbp TAR DNA binding protein 298648
rno Zrsr2 zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2 302670
rno Slu7 SLU7 homolog, splicing factor 303057
rno Rbm22 RNA binding motif protein 22 307410 IBA,ISO,ISS
rno Celf4 CUGBP, Elav-like family member 4 307540 ISO
rno U2af2 U2 small nuclear RNA auxiliary factor 2 308335
rno Rbm7 RNA binding motif protein 7 315634
rno Eri1 exoribonuclease 1 361159
rno U2af1l4 U2 small nuclear RNA auxiliary factor 1-like 4 361542
rno Snrpc small nuclear ribonucleoprotein polypeptide C 361808
rno Celf1 CUGBP, Elav-like family member 1 362160 ISO
rno Srsf6 serine and arginine rich splicing factor 6 362264 ISO,ISS
rno Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 362361
rno Fblim1 filamin binding LIM protein 1 362650
rno Lsm1 LSM1 homolog, mRNA degradation associated 364624 IDA
rno Elavl4 ELAV like RNA binding protein 4 432358
rno Srsf2 serine and arginine rich splicing factor 2 494445 ISO
rno Zrsr1 zinc finger (CCCH type), RNA binding motif and serine/arginine rich 1 498425
rno Rbm41 RNA binding motif protein 41 680581
rno Slbp stem-loop binding protein 681062
rno U2af1 U2 small nuclear RNA auxiliary factor 1 687575
rno Rbm24 RNA binding motif protein 24 690139
rno Rnpc3 RNA-binding region (RNP1, RRM) containing 3 691538
rno LOC100363294 stem-loop binding protein-like 100363294
gga SOX9 SRY-box 9 374148
gga SRSF2 serine and arginine rich splicing factor 2 396195 IEA
gga SLU7 SLU7 homolog, splicing factor 416157
gga RBM22 RNA binding motif protein 22 416270 IBA,ISS
gga SNRPC small nuclear ribonucleoprotein polypeptide C 419901
gga RBM24 RNA binding motif protein 24 420846
dre u2af1 U2 small nuclear RNA auxiliary factor 1 192328
dre snrpc small nuclear ribonucleoprotein polypeptide C 192330
dre hnrnpub heterogeneous nuclear ribonucleoprotein Ub 334490 IBA
dre prpf8 pre-mRNA processing factor 8 393951
dre u2af2b U2 small nuclear RNA auxiliary factor 2b 402989
dre rbm24a RNA binding motif protein 24a 405801
dre rbm22 RNA binding motif protein 22 406495 IBA,ISS
dre slbp stem-loop binding protein 407727
dre slu7 SLU7 homolog, splicing factor 492495
dre rbm41 RNA binding motif protein 41 492764
dre u2af2a U2 small nuclear RNA auxiliary factor 2a 557103
dre slbp2 stem-loop binding protein 2 558918
dre rnpc3 RNA-binding region (RNP1, RRM) containing 3 565672
dre hnrnpua heterogeneous nuclear ribonucleoprotein Ua 566326 IBA
dre sf1 splicing factor 1 572785
dre zrsr2 zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2 100005490
dme snf sans fille 31442
dme U2af50 U2 small nuclear riboprotein auxiliary factor 50 32602
dme U2af38 U2 small nuclear riboprotein auxiliary factor 38 33201
dme CG3294 uncharacterized protein 33677
dme Prp8 pre-mRNA processing factor 8 36304
dme tra2 transformer 2 36619 IDA
dme LS2 Large Subunit 2 37681
dme Ythdc1 YTH domain containing 1 38420 IDA
dme tra transformer 39849 IDA
dme CG14641 uncharacterized protein 40529 IBA
dme snRNP-U1-C small ribonucleoprotein particle U1 subunit C 42274
dme Ythdf YTH N6-methyladenosine RNA binding protein 42995 IDA
dme Slu7 Slu7 43427
dme Slbp Stem-loop binding protein 43448
dme SF1 Splicing factor 1 43912
dme DIP1 DISCO Interacting Protein 1 43981
dme ps pasilla 44258
dme Sxl Sex lethal 3772180 IDA
cel cdl-1 Histone RNA hairpin-binding protein 174659
cel uaf-1 Splicing factor U2AF 65 kDa subunit 175270
cel rnp-4 RNA-binding protein 8A 175572 IDA
cel prp-8 Pre-mRNA-splicing factor 8 homolog 176153
cel F08B4.7 U1 small nuclear ribonucleoprotein C 177674
cel rbm-22 Pre-mRNA-splicing factor RBM22 177979 IBA
cel sfa-1 CCHC-type domain-containing protein 178486
cel uaf-2 U2AF splicing factor 178489
cel sluh-7 Pre-mRNA-splicing factor SLU7 179443
cel sup-12 RRM domain-containing protein 180674 IPI
cel asd-2 KH domain-containing protein;RNA-binding protein asd-2 188703
sce MSL5 mRNA splicing protein MSL5 850807
sce YHC1 Yhc1p 851005
sce NAM2 leucine--tRNA ligase NAM2 851098
sce CWC2 Cwc2p 851318 IBA,IEA
sce SLU7 mRNA splicing protein SLU7 851661
sce ECM2 Ecm2p 852357 IBA
sce RPL30 ribosomal 60S subunit protein L30 852853
sce PET54 Pet54p 853137
sce MUD2 Mud2p 853788
sce MPE1 cleavage polyadenylation factor subunit MPE1 853806 IDA,IMP
sce PRP39 Prp39p 854960
sce PRP8 U4/U6-U5 snRNP complex subunit PRP8 856570
sce LSR1 9164871
sce SNR19 9164965
spo bpb1 zinc finger-splicing factor Bpb1 2538832
spo cwf5 RNA-binding protein Cwf5 2538974 IBA
spo mmi1 YTH family RNA-binding protein Mmi1 2539540
spo prp2 U2AF large subunit (U2AF-59) 2539645
spo usp105 U1 snRNP-associated protein Usp105 2540869
spo slu7 splicing factor Slu7 2540941
spo usp103 putative U1 snRNP-associated protein Usp103 2541289
spo SPAC14C4.06c putative poly(A)-binding protein Nab2 2541466 IPI
spo SPAP8A3.06 U2 auxiliary factor small subunit U2AF-23 2542482
spo cwf2 RNA-binding protein Cwf2 2542531 IBA,ISS
spo spp42 U5 snRNP complex subunit Spp42 2543413


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