GO:0035861 site of double-strand break

69 hsa genes in this database.
63 mmu genes in this database.
66 rno genes in this database.
7 gga genes in this database.
25 dre genes in this database.
12 dme genes in this database.
14 cel genes in this database.
12 sce genes in this database.
60 spo genes in this database.

[QuickGO]

term: site of double-strand break
goid: GO:0035861


Shaded genes do not have GeneChip data. The output was limited up to 100 for each of species.
Species Symbol Gene
coexpression
Locus
page
Full name* Entrez Gene ID Evidence*
hsa PARP1 poly(ADP-ribose) polymerase 1 142 IDA
hsa ATF2 activating transcription factor 2 1386 IDA
hsa DDB1 damage specific DNA binding protein 1 1642 IBA
hsa H2AX H2A.X variant histone 3014 IDA
hsa HUS1 HUS1 checkpoint clamp component 3364 IBA
hsa LMNA lamin A/C 4000 IDA
hsa MRE11 MRE11 homolog, double strand break repair nuclease 4361 IBA,IDA
hsa NBN nibrin 4683 IDA
hsa PHF1 PHD finger protein 1 5252 IDA
hsa POLH DNA polymerase eta 5429 IBA
hsa RAD51 RAD51 recombinase 5888 IDA
hsa RBBP8 RB binding protein 8, endonuclease 5932 IBA
hsa RPA2 replication protein A2 6118 IDA
hsa RPA3 replication protein A3 6119 IBA
hsa SETMAR SET domain and mariner transposase fusion gene 6419 IDA,IMP
hsa TP53 tumor protein p53 7157 IEA
hsa TP53BP1 tumor protein p53 binding protein 1 7158 IDA
hsa VCP valosin containing protein 7415 IDA
hsa WAS WASP actin nucleation promoting factor 7454 IDA
hsa XRCC4 X-ray repair cross complementing 4 7518 IDA
hsa TIMELESS timeless circadian regulator 8914 IDA
hsa RNF8 ring finger protein 8 9025 IBA,IDA
hsa PARP3 poly(ADP-ribose) polymerase family member 3 10039 IBA,IDA
hsa ARPC5 actin related protein 2/3 complex subunit 5 10092 ISS
hsa ARPC4 actin related protein 2/3 complex subunit 4 10093 ISS
hsa ARPC3 actin related protein 2/3 complex subunit 3 10094 ISS
hsa ACTR3 actin related protein 3 10096 ISS
hsa ACTR2 actin related protein 2 10097 IDA
hsa ARPC2 actin related protein 2/3 complex subunit 2 10109 ISS
hsa RAD50 RAD50 double strand break repair protein 10111 IDA
hsa MAD2L2 mitotic arrest deficient 2 like 2 10459 IC
hsa ARPC1A actin related protein 2/3 complex subunit 1A 10552 ISS
hsa SMC5 structural maintenance of chromosomes 5 23137 IDA
hsa SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 23347 IDA
hsa UFL1 UFM1 specific ligase 1 23376 IDA
hsa IFFO1 intermediate filament family orphan 1 25900 IDA
hsa SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 25939 IDA
hsa PRPF19 pre-mRNA processing factor 19 27339 IDA
hsa RPA4 replication protein A4 29935 IBA
hsa SMARCAL1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1 50485 IDA
hsa ZBTB7A zinc finger and BTB domain containing 7A 51341 ISS
hsa RNF138 ring finger protein 138 51444 IBA,IDA
hsa SIRT7 sirtuin 7 51547 IDA
hsa SHLD2 shieldin complex subunit 2 54537 IBA,IDA
hsa WDR70 WD repeat domain 70 55100 IBA
hsa WRAP53 WD repeat containing antisense to TP53 55135 IDA
hsa RFWD3 ring finger and WD repeat domain 3 55159 IBA,IDA
hsa RIF1 replication timing regulatory factor 1 55183 IDA
hsa KDM4D lysine demethylase 4D 55693 IDA
hsa SLF2 SMC5-SMC6 complex localization factor 2 55719 IBA,IDA
hsa RAD18 RAD18 E3 ubiquitin protein ligase 56852 IDA
hsa SMARCAD1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 56916 IDA
hsa INIP INTS3 and NABP interacting protein 58493 IDA
hsa NABP1 nucleic acid binding protein 1 64859 IDA
hsa INTS3 integrator complex subunit 3 65123 IDA
hsa NABP2 nucleic acid binding protein 2 79035 IDA
hsa SMC6 structural maintenance of chromosomes 6 79677 IBA,IDA
hsa SLF1 SMC5-SMC6 complex localization factor 1 84250 IDA
hsa HELB DNA helicase B 92797 IMP
hsa CGAS cyclic GMP-AMP synthase 115004 IBA,IDA
hsa CNTD1 cyclin N-terminal domain containing 1 124817 IBA
hsa HUS1B HUS1 checkpoint clamp component B 135458 IBA
hsa SHLD1 shieldin complex subunit 1 149840 IBA,IDA
hsa ESCO2 establishment of sister chromatid cohesion N-acetyltransferase 2 157570 IEA
hsa RNF168 ring finger protein 168 165918 IDA
hsa APLF aprataxin and PNKP like factor 200558 IBA,IDA
hsa RNF169 ring finger protein 169 254225 IDA
hsa PAXX PAXX non-homologous end joining factor 286257 IBA,IDA
hsa SHLD3 shieldin complex subunit 3 112441434 IDA
mmu Parp1 poly (ADP-ribose) polymerase family, member 1 11545 ISO
mmu Atf2 activating transcription factor 2 11909 IMP,ISO
mmu Ddb1 damage specific DNA binding protein 1 13194 IBA
mmu Smarcad1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 13990 ISO
mmu Fh1 fumarate hydratase 1 14194 ISO
mmu H2ax H2A.X variant histone 15270 IDA,ISO
mmu Hus1 HUS1 checkpoint clamp component 15574 IBA
mmu Lmna lamin A 16905 ISO
mmu Zbtb7a zinc finger and BTB domain containing 7a 16969 IDA
mmu Mre11a MRE11A homolog A, double strand break repair nuclease 17535 IBA,ISO
mmu Rad50 RAD50 double strand break repair protein 19360 ISO
mmu Rad51 RAD51 recombinase 19361 ISO
mmu Rpa2 replication protein A2 19891 IBA,ISO
mmu Phf1 PHD finger protein 1 21652 ISO
mmu Timeless timeless circadian clock 1 21853 ISO
mmu Trp53 transformation related protein 53 22059 IDA
mmu Was Wiskott-Aldrich syndrome 22376 ISO
mmu Trp53bp1 transformation related protein 53 binding protein 1 27223 IDA,ISO
mmu Nbn nibrin 27354 ISO
mmu Prpf19 pre-mRNA processing factor 19 28000 ISO
mmu Rif1 replication timing regulatory factor 1 51869 IDA,IMP,ISO
mmu Smarcal1 SWI/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 54380 ISO
mmu Samhd1 SAM domain and HD domain, 1 56045 ISO
mmu Rnf138 ring finger protein 138 56515 IBA,ISO
mmu Rad18 RAD18 E3 ubiquitin protein ligase 58186 ISO
mmu Rnf8 ring finger protein 8 58230 IBA,ISO
mmu Inip INTS3 and NABP interacting protein 66209 ISO
mmu Actr2 ARP2 actin-related protein 2 66713 ISO
mmu Smc6 structural maintenance of chromosomes 6 67241 IBA,ISO
mmu Ufl1 UFM1 specific ligase 1 67490 ISO
mmu Cntd1 cyclin N-terminal domain containing 1 68107 IBA
mmu Rpa3 replication protein A3 68240 IBA
mmu Nabp2 nucleic acid binding protein 2 69917 ISO
mmu Rnf168 ring finger protein 168 70238 ISO
mmu Esco2 establishment of sister chromatid cohesion N-acetyltransferase 2 71988 IDA
mmu Aplf aprataxin and PNKP like factor 72103 IBA,ISO
mmu Shld1 shieldin complex subunit 1 73747 IBA,ISO
mmu Rnf138rt1 ring finger protein 138, retrogene 1 74264 IBA,ISO
mmu Smchd1 SMC hinge domain containing 1 74355 ISO
mmu Setmar SET domain without mariner transposase fusion 74729 ISO
mmu Shld2 shieldin complex subunit 2 75698 IBA,ISO
mmu Polh polymerase (DNA directed), eta (RAD 30 related) 80905 IBA
mmu Slf1 SMC5-SMC6 complex localization factor 1 105377 ISO
mmu Xrcc4 X-ray repair complementing defective repair in Chinese hamster cells 4 108138 ISO
mmu Rnf169 ring finger protein 169 108937 ISO
mmu Nabp1 nucleic acid binding protein 1 109019 ISO
mmu Helb helicase (DNA) B 117599 ISO
mmu Sirt7 sirtuin 7 209011 IMP,ISO
mmu Hus1b HUS1 checkpoint clamp component B 210554 IBA
mmu Cgas cyclic GMP-AMP synthase 214763 IBA,ISO
mmu Wrap53 WD repeat containing, antisense to Trp53 216853 ISO
mmu Rbbp8 retinoblastoma binding protein 8, endonuclease 225182 IBA
mmu Smc5 structural maintenance of chromosomes 5 226026 ISO
mmu Slf2 SMC5-SMC6 complex localization factor 2 226151 IBA,ISO
mmu Paxx non-homologous end joining factor 227622 IBA,ISO
mmu Ints3 integrator complex subunit 3 229543 ISO
mmu Rfwd3 ring finger and WD repeat domain 3 234736 IBA,ISO
mmu Parp3 poly (ADP-ribose) polymerase family, member 3 235587 IBA,IDA,ISO
mmu Kdm4d lysine (K)-specific demethylase 4D 244694 IDA,ISO
mmu Vcp valosin containing protein 269523 ISO
mmu Iffo1 intermediate filament family orphan 1 320678 ISO
mmu Wdr70 WD repeat domain 70 545085 IBA
mmu Gm28043 predicted gene, 28043 106014251 IBA
rno Fh fumarate hydratase 24368 ISO
rno Tp53 tumor protein p53 24842 ISO
rno Parp1 poly (ADP-ribose) polymerase 1 25591 ISO
rno Rpa2 replication protein A2 59102 IBA,ISO,ISS
rno Lmna lamin A/C 60374 IEA,ISO,ISS
rno Rad50 RAD50 double strand break repair protein 64012 ISO
rno Mre11 MRE11 homolog, double strand break repair nuclease 64046 IBA,IEA,ISO,ISS
rno Ddb1 damage-specific DNA binding protein 1 64470 IBA
rno Atf2 activating transcription factor 2 81647 ISO,ISS
rno Actr3 actin related protein 3 81732 ISS
rno Arpc1a actin related protein 2/3 complex, subunit 1A 81824 ISS
rno Timeless timeless circadian regulator 83508 ISO,ISS
rno Nbn nibrin 85482 IEA,ISO
rno Rnf138 ring finger protein 138 94196 IBA,ISO,ISS
rno Vcp valosin-containing protein 116643 ISO,ISS
rno Zbtb7a zinc finger and BTB domain containing 7a 117107 IEA,ISO,ISS
rno Prpf19 pre-mRNA processing factor 19 246216 ISO,ISS
rno Wrap53 WD repeat containing, antisense to TP53 287432 ISO,ISS
rno Actr2 actin related protein 2 289820 ISO,ISS
rno Rbbp8 RB binding protein 8, endonuclease 291787 IBA
rno Smc5 structural maintenance of chromosomes 5 293967 ISO
rno Phf1 PHD finger protein 1 294287 ISO
rno Slf1 SMC5-SMC6 complex localization factor 1 294601 ISO
rno Wdr70 WD repeat domain 70 294783 IBA
rno Rif1 replication timing regulatory factor 1 295602 ISO
rno Tp53bp1 tumor protein p53 binding protein 1 296099 ISO
rno Paxx PAXX, non-homologous end joining factor 296565 IBA,ISO
rno Rpa3 replication protein A3 296883 IBA
rno Inip INTS3 and NABP interacting protein 298032 ISO
rno Parp3 poly (ADP-ribose) polymerase family, member 3 300985 IBA,ISO
rno Arpc2 actin related protein 2/3 complex, subunit 2 301511 ISS
rno Sirt7 sirtuin 7 303745 ISO,ISS
rno Xrcc4 X-ray repair cross complementing 4 309995 ISO
rno Samhd1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 311580 ISO
rno Smarcad1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1` 312398 ISO,ISS
rno Ufl1 Ufm1-specific ligase 1 313115 ISO,ISS
rno Smc6 structural maintenance of chromosomes 6 313961 IBA,ISO
rno Polh DNA polymerase eta 316235 IBA
rno Smarcal1 Swi/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 316477 ISO,ISS
rno Smchd1 structural maintenance of chromosomes flexible hinge domain containing 1 316732 ISO
rno Was WASP actin nucleation promoting factor 317371 ISO
rno RGD1565844 similar to RIKEN cDNA 1700045I19 317486 IBA
rno Arpc5 actin related protein 2/3 complex, subunit 5 360854 ISS
rno Rnf8 ring finger protein 8 361815 IBA,ISO,ISS
rno Ints3 integrator complex subunit 3 361988 ISO
rno Rad18 RAD18 E3 ubiquitin protein ligase 362412 ISO
rno Iffo1 intermediate filament family orphan 1 362437 ISO
rno Nabp2 nucleic acid binding protein 2 362813 ISO
rno Nabp1 nucleic acid binding protein 1 363227 ISO
rno Shld2 shieldin complex subunit 2 364514 IBA,ISO
rno Cntd1 cyclin N-terminal domain containing 1 498001 IBA
rno Hus1 HUS1 checkpoint clamp component 498411 IBA
rno Slf2 SMC5-SMC6 complex localization factor 2 499360 IBA,ISO
rno Rad51 RAD51 recombinase 499870 ISO
rno Aplf aprataxin and PNKP like factor 500247 IBA,ISO
rno Setmar SET domain and mariner transposase fusion gene 500281 ISO
rno Helb DNA helicase B 500837 ISO
rno H2ax H2A.X variant histone 500987 ISO
rno Shld1 shieldin complex subunit 1 681292 IBA,ISO
rno Cgas cyclic GMP-AMP synthase 682147 ISO
rno Rnf169 ring finger protein 169 685009 ISO
rno Kdm4d lysine demethylase 4D 689582 ISO
rno Rnf168 ring finger protein 168 690043 ISO,ISS
rno Esco2 establishment of sister chromatid cohesion N-acetyltransferase 2 691979 ISO
rno Rfwd3 ring finger and WD repeat domain 3 103690025 ISO
rno Shld3 shieldin complex subunit 3 120101079 ISO
gga DDB1 damage specific DNA binding protein 1 374050 IBA
gga ACTR3 ARP3 actin related protein 3 homolog 374197 ISS
gga MRE11 MRE11 homolog, double strand break repair nuclease 395555 IBA
gga ACTR2 ARP2 actin related protein 2 homolog 396147 ISS
gga SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 419125 ISS
gga UFL1 UFM1 specific ligase 1 421804 ISS
gga RIF1 replication timing regulatory factor 1 424316 ISS
dre rpa2 replication protein A2 65226 IBA
dre rbbp8l retinoblastoma binding protein 8-like 324358 IBA
dre vcp valosin containing protein 327197 ISS
dre rnf168 ring finger protein 168 334081 ISS
dre parp3 poly (ADP-ribose) polymerase family, member 3 335495 IBA
dre rpa3 replication protein A3 393196 IBA
dre ufl1 UFM1-specific ligase 1 393578 ISS
dre ddb1 damage-specific DNA binding protein 1 393599 IBA
dre rnf8 ring finger protein 8, E3 ubiquitin protein ligase 404050 IBA,ISS
dre mre11a MRE11 homolog A, double strand break repair nuclease 406637 IBA
dre actr2a actin related protein 2a 406820 ISS
dre paxx PAXX non-homologous end joining factor 492631 IBA
dre rbbp8 retinoblastoma binding protein 8 503536 IBA
dre samhd1 SAM domain and HD domain 1 553453 ISS
dre actr2b actin related protein 2b 554861 ISS
dre cgasa cyclic GMP-AMP synthase a 557043 IBA
dre si:dkey-119f1.1 si:dkey-119f1.1 557127 IBA
dre smarcad1a SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 a 557875 ISS
dre smarcad1b SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 b 563175 ISS
dre polh polymerase (DNA directed), eta 678520 IBA
dre rnf169 ring finger protein 169 795748 ISS
dre smc6 structural maintenance of chromosomes 6 797304 IBA
dre zgc:162895 zgc:162895 100037341 IBA
dre shld2 shieldin complex subunit 2 100149820 IBA
dre rfwd3 ring finger and WD repeat domain 3 100329327 IBA
dme vilya vilya 31264 IDA
dme RPA3 Replication protein A3 32113 IBA
dme narya narya 32932 IDA
dme mre11 meiotic recombination 11 34565 IBA
dme RPA2 Replication protein A2 35364 IBA
dme CG5543 uncharacterized protein 37768 IBA
dme DNApol-eta DNA polymerase eta 40438 IBA
dme Hus1-like Hus1-like 40598 IBA
dme pic piccolo 41611 IBA
dme CG6171 uncharacterized protein 41872 IBA
dme jnj java no jive 42876 IBA
dme His2Av Histone H2A variant 43229 IDA
cel hus-1 Checkpoint protein 171939 IBA
cel rpa-2 RPA_C domain-containing protein 172092 IBA
cel wrn-1 putative Werner syndrome ATP-dependent helicase homolog 1 174081 IDA
cel smc-6 Structural maintenance of chromosomes protein 6 homolog smc-6 174776 IBA
cel polh-1 UmuC domain-containing protein 175337 IBA
cel cosa-1 CrossOver Site Associated 175388 IBA,IDA
cel com-1 uncharacterized protein 176518 IBA
cel rad-51 DNA repair protein RAD51 homolog 177914 IDA
cel ddb-1 DNA damage-binding protein 1 178156 IBA
cel R02C2.1 Protein kinase domain-containing protein 178550 IBA
cel gad-1 Gastrulation defective protein 1 179027 IBA
cel mre-11 Double-strand break repair protein mre-11 179488 IBA
cel C23H4.6 AAA_23 domain-containing protein;Structural maintenance of chromosomes protein 6 181384 IBA
cel rpa-4 RPA_C domain-containing protein 186576 IBA
sce MEC3 Mec3p 850995 IBA
sce PSY3 Psy3p 851091 IMP
sce SMC6 DNA repair protein SMC6 851099 IBA,IDA
sce SHU2 Shu2p 851650 IMP
sce RTT103 Rtt103p 851884 IDA
sce RAD30 DNA-directed DNA polymerase eta 852028 IBA
sce CHK1 serine/threonine protein kinase CHK1 852577 IBA
sce MTE1 Mte1p 852933 IBA,IDA
sce CSM2 Csm2p 854674 IMP
sce MRE11 MRX complex nuclease subunit 855264 IBA
sce RFA2 Rfa2p 855404 IBA
sce SHU1 Shu1p 856383 IMP
spo ctp1 CtIP family endonuclease 2538706 IBA,IDA
spo ssb3 DNA replication factor A subunit Ssb3 2538775 IBA,IDA
spo ssb2 single-stranded DNA-binding protein Ssb2 2538781 IBA,IDA
spo SPCC553.01c hypothetical protein 2538994 IBA,IDA
spo smc6 Smc5-6 complex SMC subunit Smc6 2539020 IBA
spo chk1 protein kinase Chk1 2539087 IBA,IDA
spo pku70 Ku domain protein Pku70 2539090 IDA
spo SPCC2H8.05c hypothetical protein 2539210 IDA
spo SPCC548.05c putative ubiquitin-protein ligase E3 2539314 IDA
spo ast1 XP-G family protein ast1 2539485 IDA
spo htb1 histone H2B Htb1 2539523 IDA
spo eso1 sister chromatid cohesion protein/DNA polymerase eta Eso1 2539666 IBA,IDA
spo SPBC14C8.09c hypothetical protein 2539709 IDA
spo rev1 putative deoxycytidyl transferase Rev1 2539723 IDA
spo SPBC16C6.04 hypothetical protein 2539754 IBA,IDA
spo cdc23 MCM-associated protein Mcm10 2539838 IDA
spo top3 DNA topoisomerase III 2539881 IDA
spo sad1 protein Sad1 2539914 IDA
spo pcn1 DNA polymerase delta processivity factor 2540020 IDA
spo dna2 DNA replication endonuclease-helicase Dna2 2540148 IDA
spo exo1 exonuclease I Exo1 2540348 IDA
spo SPBC29A10.10c putative tRNA-splicing endonuclease positive effector 2540523 IDA
spo sfr1 Swi five-dependent recombination repair protein Sfr1 2540584 IDA
spo swi10 DNA repair endonuclease Swi10 2540887 IDA
spo crb2 DNA repair protein 2540992 IDA
spo SPBC409.16c putative recombination protein Saw1 2541027 IDA
spo brc1 BRCT domain protein Brc1 2541071 IDA
spo SPBC651.12c hypothetical protein 2541145 IDA
spo ssb1 DNA replication factor A subunit Ssb1 2541158 IDA
spo pfh1 DNA repair and recombination protein 2541213 IDA
spo pli1 SUMO E3 ligase Pli1 2541580 IDA
spo rqh1 RecQ type DNA helicase Rqh1 2541620 IDA
spo rad50 DNA repair protein Rad50 2541635 IDA
spo hus1 checkpoint clamp complex protein Hus1 2541746 IBA,IDA
spo rhp57 RecA family ATPase Rhp57 2542007 IDA
spo SPAC23A1.19c putative RecQ type DNA helicase Hrq1 2542036 IDA
spo rec12 endonuclease Rec12 2542150 IDA
spo ddb1 damaged DNA-binding protein Ddb1 2542207 IBA,IDA
spo SPAC17A2.12 putative ATP-dependent DNA helicase 2542440 IDA
spo mdb1 BRCT domain protein 2542517 IDA
spo rfp1 SUMO-targeted ubiquitin-protein ligase subunit Rfp1 2542542 IDA
spo rad1 checkpoint clamp complex protein Rad1 2542558 IDA
spo rhp54 DNA repair protein 2542749 IDA
spo rad32 Rad32 nuclease 2542757 IBA,IDA
spo rad22 DNA recombination protein Rad22 2543086 IDA
spo chl1 putative ATP-dependent DNA helicase Chl1 2543118 IDA
spo SPAC343.17c WD repeat-containing protein 2543123 IBA,IDA
spo SPAC328.02 RING finger protein 2543148 IDA
spo rad2 FEN-1 endonuclease Rad2 2543164 IDA
spo rad4 BRCT domain protein Rad4 2543281 IDA
spo msh3 DNA mismatch repair protein 2543392 IDA
spo cdc24 DNA replication protein Cdc24 2543407 IDA
spo mst1 KAT5 family histone acetyltransferase Mst1 2543506 IDA
spo rad9 checkpoint clamp complex protein Rad9 2543544 IDA
spo rhp51 RecA family recombinase Rhp51 2543580 IDA
spo pol1 DNA polymerase alpha catalytic subunit 2543629 IDA
spo fml1 ATP-dependent 3' to 5' DNA helicase 2543668 IDA
spo rhp55 RecA family ATPase Rhp55 2543685 IDA
spo nbs1 Mre11 complex subunit Nbs1 3361306 IDA
spo rad8 ubiquitin-protein ligase E3 Rad8 3361391 IDA


The preparation time of this page was 0.4 [sec].