GO:0035198 miRNA binding
35 hsa genes in this database. | |
34 mmu genes in this database. | |
33 rno genes in this database. | |
5 gga genes in this database. | |
11 dre genes in this database. | |
1 dme genes in this database. | |
3 cel genes in this database. |
[QuickGO]
term: miRNA binding
goid: GO:0035198
Shaded genes do not have GeneChip data. The output was limited up to 100 for each of species.
Species | Symbol | Gene coexpression |
Locus page |
Full name* | Entrez Gene ID | Evidence* |
---|---|---|---|---|---|---|
hsa | ELAVL1 | ELAV like RNA binding protein 1 | 1994 | IDA | ||
hsa | FMR1 | FMRP translational regulator 1 | 2332 | IDA | ||
hsa | HNRNPA1 | heterogeneous nuclear ribonucleoprotein A1 | 3178 | IDA | ||
hsa | HNRNPA2B1 | heterogeneous nuclear ribonucleoprotein A2/B1 | 3181 | IDA | ||
hsa | YBX1 | Y-box binding protein 1 | 4904 | IDA | ||
hsa | POU5F1 | POU class 5 homeobox 1 | 5460 | IDA | ||
hsa | RBM4 | RNA binding motif protein 4 | 5936 | IDA | ||
hsa | SOX2 | SRY-box transcription factor 2 | 6657 | IDA | ||
hsa | SOX4 | SRY-box transcription factor 4 | 6659 | IEA | ||
hsa | TARBP2 | TARBP2 subunit of RISC loading complex | 6895 | IEA | ||
hsa | RBM10 | RNA binding motif protein 10 | 8241 | IDA | ||
hsa | DDX21 | DExD-box helicase 21 | 9188 | IDA | ||
hsa | PUM1 | pumilio RNA binding family member 1 | 9698 | IDA | ||
hsa | MATR3 | matrin 3 | 9782 | IDA | ||
hsa | KCNQ1OT1 | KCNQ1 opposite strand/antisense transcript 1 | 10984 | IDA | ||
hsa | ZC3H7B | zinc finger CCCH-type containing 7B | 23264 | IBA,IDA | ||
hsa | TUT4 | terminal uridylyl transferase 4 | 23318 | ISS | ||
hsa | PUM2 | pumilio RNA binding family member 2 | 23369 | IDA | ||
hsa | ZNF346 | zinc finger protein 346 | 23567 | IDA | ||
hsa | AGO1 | argonaute RISC component 1 | 26523 | IDA | ||
hsa | AGO2 | argonaute RISC catalytic component 2 | 27161 | IDA,IPI,TAS | ||
hsa | ZC3H7A | zinc finger CCCH-type containing 7A | 29066 | IBA,IDA | ||
hsa | SPOUT1 | SPOUT domain containing methyltransferase 1 | 51490 | IBA,IDA | ||
hsa | TUT7 | terminal uridylyl transferase 7 | 79670 | IDA | ||
hsa | LIN28A | lin-28 homolog A | 79727 | ISS | ||
hsa | ZC3H12A | zinc finger CCCH-type containing 12A | 80149 | IDA | ||
hsa | ZC3H10 | zinc finger CCCH-type containing 10 | 84872 | IDA | ||
hsa | PNPT1 | polyribonucleotide nucleotidyltransferase 1 | 87178 | IDA | ||
hsa | TRIM71 | tripartite motif containing 71 | 131405 | IDA,ISS | ||
hsa | RC3H1 | ring finger and CCCH-type domains 1 | 149041 | ISS | ||
hsa | AGO3 | argonaute RISC catalytic component 3 | 192669 | IDA | ||
hsa | AGO4 | argonaute RISC component 4 | 192670 | IDA | ||
hsa | NEAT1 | nuclear paraspeckle assembly transcript 1 | 283131 | IDA | ||
hsa | DND1 | DND microRNA-mediated repression inhibitor 1 | 373863 | IDA | ||
hsa | HIF1A-AS2 | HIF1A antisense RNA 2 | 100750247 | IDA | ||
mmu | Fmr1 | FMRP translational regulator 1 | 14265 | IDA,ISO | ||
mmu | Hnrnpa1 | heterogeneous nuclear ribonucleoprotein A1 | 15382 | ISO | ||
mmu | Elavl1 | ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R) | 15568 | ISO | ||
mmu | Matr3 | matrin 3 | 17184 | ISO | ||
mmu | Pou5f1 | POU domain, class 5, transcription factor 1 | 18999 | ISO | ||
mmu | Rbm4 | RNA binding motif protein 4 | 19653 | ISO | ||
mmu | Zc3h7b | zinc finger CCCH type containing 7B | 20286 | IBA,ISO | ||
mmu | Sox2 | SRY (sex determining region Y)-box 2 | 20674 | ISO | ||
mmu | Sox4 | SRY (sex determining region Y)-box 4 | 20677 | IDA | ||
mmu | Ybx1 | Y box protein 1 | 22608 | ISO | ||
mmu | Zfp346 | zinc finger protein 346 | 26919 | ISO | ||
mmu | Hnrnpa2b1 | heterogeneous nuclear ribonucleoprotein A2/B1 | 53379 | ISO | ||
mmu | Ddx21 | DExD box helicase 21 | 56200 | ISO | ||
mmu | Pnpt1 | polyribonucleotide nucleotidyltransferase 1 | 71701 | ISO | ||
mmu | Ago4 | argonaute RISC catalytic subunit 4 | 76850 | ISO | ||
mmu | 2810429I04Rik | RIKEN cDNA 2810429I04 gene | 76937 | IPI | ||
mmu | Pum1 | pumilio RNA-binding family member 1 | 80912 | ISO | ||
mmu | Pum2 | pumilio RNA-binding family member 2 | 80913 | ISO | ||
mmu | Lin28a | lin-28 homolog A | 83557 | IDA | ||
mmu | Zc3h10 | zinc finger CCCH type containing 10 | 103284 | ISO | ||
mmu | Zc3h7a | zinc finger CCCH type containing 7 A | 106205 | IBA,ISO | ||
mmu | Dicer1 | dicer 1, ribonuclease type III | 192119 | IDA | ||
mmu | Ago3 | argonaute RISC catalytic subunit 3 | 214150 | ISO | ||
mmu | Tut7 | terminal uridylyl transferase 7 | 214290 | ISO | ||
mmu | Spout1 | SPOUT domain containing methyltransferase 1 | 227695 | IBA,ISO | ||
mmu | Tut4 | terminal uridylyl transferase 4 | 230594 | IDA | ||
mmu | Zc3h12a | zinc finger CCCH type containing 12A | 230738 | ISO | ||
mmu | Ago1 | argonaute RISC catalytic subunit 1 | 236511 | IDA,ISO | ||
mmu | Rbm10 | RNA binding motif protein 10 | 236732 | ISO | ||
mmu | Ago2 | argonaute RISC catalytic subunit 2 | 239528 | IDA,IMP,ISO | ||
mmu | Rc3h1 | RING CCCH (C3H) domains 1 | 381305 | IDA | ||
mmu | Trim71 | tripartite motif-containing 71 | 636931 | IDA,ISO | ||
mmu | Gm10768 | predicted gene 10768 | 100038628 | IDA,IMP | ||
mmu | Gm15290 | predicted gene 15290 | 102636218 | IDA | ||
rno | Fmr1 | FMRP translational regulator 1 | 24948 | IEA,ISO,ISS | ||
rno | Matr3 | matrin 3 | 29150 | ISO,ISS | ||
rno | Hnrnpa1 | heterogeneous nuclear ribonucleoprotein A1 | 29578 | ISO,ISS | ||
rno | Ago2 | argonaute RISC catalytic component 2 | 59117 | IEA,ISO | ||
rno | Rbm10 | RNA binding motif protein 10 | 64510 | IEA,ISO,ISS | ||
rno | Rbm4 | RNA binding motif protein 4 | 293663 | ISO | ||
rno | Pou5f1 | POU class 5 homeobox 1 | 294562 | ISO | ||
rno | Ago4 | argonaute RISC component 4 | 298533 | ISO | ||
rno | Pum2 | pumilio RNA-binding family member 2 | 298874 | ISO | ||
rno | Dicer1 | dicer 1 ribonuclease III | 299284 | ISO | ||
rno | Trim71 | tripartite motif containing 71 | 301042 | ISO,ISS | ||
rno | Zfp346 | zinc finger protein 346 | 306765 | ISO | ||
rno | Tut4 | terminal uridylyl transferase 4 | 313481 | ISO | ||
rno | Zc3h12a | zinc finger CCCH type containing 12A | 313587 | ISO,ISS | ||
rno | Ago3 | argonaute RISC catalytic component 3 | 313593 | ISO | ||
rno | Ago1 | argonaute RISC component 1 | 313594 | ISO | ||
rno | Zc3h7b | zinc finger CCCH-type containing 7B | 315158 | IBA,ISO | ||
rno | Ddx21 | DExD-box helicase 21 | 317399 | ISO,ISS | ||
rno | Zc3h7a | zinc finger CCCH type containing 7 A | 360466 | IBA,ISO | ||
rno | Pnpt1 | polyribonucleotide nucleotidyltransferase 1 | 360992 | ISO | ||
rno | Hnrnpa2b1 | heterogeneous nuclear ribonucleoprotein A2/B1 | 362361 | ISO,ISS | ||
rno | Pum1 | pumilio RNA-binding family member 1 | 362609 | ISO | ||
rno | Tarbp2 | TARBP2 subunit of RISC loading complex | 363006 | IEA | ||
rno | Elavl1 | ELAV like RNA binding protein 1 | 363854 | ISO,ISS | ||
rno | Sox4 | SRY-box transcription factor 4 | 364712 | ISO | ||
rno | Sox2 | SRY-box transcription factor 2 | 499593 | ISO | ||
rno | Spout1 | SPOUT domain containing methyltransferase 1 | 499770 | IBA,ISO | ||
rno | Ybx1 | Y box binding protein 1 | 500538 | ISO,ISS | ||
rno | Lin28a | lin-28 homolog A | 500562 | ISO | ||
rno | Tut7 | terminal uridylyl transferase 7 | 501515 | ISO | ||
rno | Dnd1 | DND microRNA-mediated repression inhibitor 1 | 679841 | ISO | ||
rno | Rc3h1 | ring finger and CCCH-type domains 1 | 680586 | ISO | ||
rno | Zc3h10 | zinc finger CCCH type containing 10 | 685928 | ISO | ||
gga | YBX1 | Y-box binding protein 1 | 386575 | ISS | ||
gga | PUM1 | pumilio RNA binding family member 1 | 419554 | IEA | ||
gga | AGO3 | argonaute 3, RISC catalytic component | 419628 | IEA | ||
gga | AGO4 | argonaute 4, RISC catalytic component | 419629 | IEA | ||
gga | TRIM71 | tripartite motif containing 71 | 428445 | ISS | ||
dre | tarbp2 | TAR (HIV) RNA binding protein 2 | 336141 | IEA | ||
dre | zc3h7a | zinc finger CCCH-type containing 7A | 406743 | IBA,IEA | ||
dre | spout1 | SPOUT domain containing methyltransferase 1 | 447888 | IBA | ||
dre | zc3h7bb | zinc finger CCCH-type containing 7Bb | 557754 | IBA,IEA | ||
dre | trim71 | tripartite motif containing 71, E3 ubiquitin protein ligase | 561754 | ISS | ||
dre | ago3b | argonaute RISC catalytic component 3b | 568159 | IEA | ||
dre | ago2 | argonaute RISC catalytic component 2 | 570630 | IDA | ||
dre | ago3a | argonaute RISC catalytic component 3a | 641428 | IEA | ||
dre | ybx1 | Y box binding protein 1 | 795398 | ISS | ||
dre | zc3h7ba | zinc finger CCCH-type containing 7Ba | 100003994 | IBA,IEA | ||
dre | ago4 | argonaute RISC component 4 | 100535764 | IEA | ||
dme | AGO1 | Argonaute-1 | 36544 | IDA | ||
cel | lin-41 | Protein lin-41 | 172760 | ISS | ||
cel | alg-2 | Protein argonaute | 173468 | IPI | ||
cel | alg-1 | Protein argonaute | 181504 | IPI |