GO:0031491 nucleosome binding

71 hsa genes in this database.
50 mmu genes in this database.
55 rno genes in this database.
18 gga genes in this database.
43 dre genes in this database.
45 dme genes in this database.
19 cel genes in this database.
1 cfa genes in this database.
27 sce genes in this database.
21 spo genes in this database.

[QuickGO]

term: nucleosome binding
goid: GO:0031491


Shaded genes do not have GeneChip data. The output was limited up to 100 for each of species.
Species Symbol Gene
coexpression
Locus
page
Full name* Entrez Gene ID Evidence*
hsa ACTB actin beta 60
hsa ACTL6A actin like 6A 86
hsa RCC1 regulator of chromosome condensation 1 1104 IMP
hsa CHD4 chromodomain helicase DNA binding protein 4 1108
hsa EZH1 enhancer of zeste 1 polycomb repressive complex 2 subunit 2145
hsa H1-0 H1.0 linker histone 3005
hsa H1-2 H1.2 linker histone, cluster member 3006
hsa H1-3 H1.3 linker histone, cluster member 3007
hsa H1-4 H1.4 linker histone, cluster member 3008
hsa H1-5 H1.5 linker histone, cluster member 3009
hsa H1-6 H1.6 linker histone, cluster member 3010
hsa H2AZ1 H2A.Z variant histone 1 3015
hsa H3-3A H3.3 histone A 3020
hsa H3-3B H3.3 histone B 3021
hsa H1-1 H1.1 linker histone, cluster member 3024
hsa HDAC1 histone deacetylase 1 3065
hsa HDAC2 histone deacetylase 2 3066
hsa HMGN1 high mobility group nucleosome binding domain 1 3150
hsa HMGN2 high mobility group nucleosomal binding domain 2 3151
hsa HNRNPC heterogeneous nuclear ribonucleoprotein C 3183
hsa MLLT6 MLLT6, PHD finger containing 4302 IBA,IDA
hsa NAP1L4 nucleosome assembly protein 1 like 4 4676 IDA
hsa RBBP4 RB binding protein 4, chromatin remodeling factor 5928
hsa RNF4 ring finger protein 4 6047 ISS
hsa SMARCA1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 6594 IEA
hsa SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 6597
hsa SMARCB1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 6598
hsa SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 6599
hsa SMARCC2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2 6601
hsa SMARCD2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 6603
hsa SMARCE1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 6605
hsa SSRP1 structure specific recognition protein 1 6749 IBA
hsa SUPT6H SPT6 homolog, histone chaperone and transcription elongation factor 6830 IBA
hsa HIRA histone cell cycle regulator 7290 IBA
hsa VRK1 VRK serine/threonine kinase 1 7443
hsa MLLT10 MLLT10 histone lysine methyltransferase DOT1L cofactor 8028 IBA,IDA
hsa HMGA2 high mobility group AT-hook 2 8091
hsa ARID1A AT-rich interaction domain 1A 8289 IBA
hsa SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 8467 IEA
hsa EED embryonic ectoderm development 8726 IBA
hsa MBD2 methyl-CpG binding domain protein 2 8932
hsa H1-10 H1.10 linker histone 8971
hsa MTA2 metastasis associated 1 family member 2 9219
hsa HMGN3 high mobility group nucleosomal binding domain 3 9324
hsa MACROH2A1 macroH2A.1 histone 9555
hsa PARP2 poly(ADP-ribose) polymerase 2 10038 IDA
hsa ZNHIT1 zinc finger HIT-type containing 1 10467 IBA
hsa HMGN4 high mobility group nucleosomal binding domain 4 10473
hsa SUPT16H SPT16 homolog, facilitates chromatin remodeling subunit 11198 IBA
hsa CABIN1 calcineurin binding protein 1 23523 IBA
hsa L3MBTL1 L3MBTL histone methyl-lysine binding protein 1 26013 IDA
hsa NOC2L NOC2 like nucleolar associated transcriptional repressor 26155 IDA
hsa UHRF1 ubiquitin like with PHD and ring finger domains 1 29128
hsa HP1BP3 heterochromatin protein 1 binding protein 3 50809 IBA,IDA
hsa MBD3 methyl-CpG binding domain protein 3 53615
hsa SPHK2 sphingosine kinase 2 56848
hsa GATAD2B GATA zinc finger domain containing 2B 57459
hsa ARID1B AT-rich interaction domain 1B 57492 IBA
hsa ACTR6 actin related protein 6 64431 IBA
hsa HMGN5 high mobility group nucleosome binding domain 5 79366
hsa SAP30L SAP30 like 79685 IDA
hsa THAP7 THAP domain containing 7 80764
hsa GLYR1 glyoxylate reductase 1 homolog 84656 IDA
hsa PWWP3A PWWP domain containing 3A, DNA repair factor 84939 IBA,IDA
hsa DNTTIP1 deoxynucleotidyltransferase terminal interacting protein 1 116092 IBA,IDA
hsa H1-8 H1.8 linker histone 132243
hsa RNF168 ring finger protein 168 165918 IDA
hsa RNF169 ring finger protein 169 254225 IDA
hsa H1-9P H1.9 linker histone, pseudogene 373861
hsa H3Y1 H3.Y histone 1 391769
hsa H3-5 H3.5 histone 440093
mmu Parp2 poly (ADP-ribose) polymerase family, member 2 11546 ISO
mmu Eed embryonic ectoderm development 13626 IBA
mmu Ezh1 enhancer of zeste 1 polycomb repressive complex 2 subunit 14055
mmu H1f3 H1.3 linker histone, cluster member 14957
mmu H1f0 H1.0 linker histone 14958
mmu H3f3a H3.3 histone A 15078
mmu H3f3b H3.3 histone B 15081
mmu Hira histone cell cycle regulator 15260 IBA
mmu Hmgn1 high mobility group nucleosomal binding domain 1 15312
mmu Hmga2 high mobility group AT-hook 2 15364
mmu Hp1bp3 heterochromatin protein 1, binding protein 3 15441 IBA,ISO
mmu Mllt10 myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10 17354 IBA,ISO
mmu Nap1l4 nucleosome assembly protein 1-like 4 17955 ISO
mmu Uhrf1 ubiquitin-like, containing PHD and RING finger domains, 1 18140
mmu Rnf4 ring finger protein 4 19822 ISO
mmu Ssrp1 structure specific recognition protein 1 20833 IBA
mmu Supt6 SPT6, histone chaperone and transcription elongation factor 20926 IBA
mmu Vrk1 vaccinia related kinase 1 22367
mmu Macroh2a1 macroH2A.1 histone 26914
mmu H1f2 H1.2 linker histone, cluster member 50708
mmu H1f4 H1.4 linker histone, cluster member 50709
mmu Sap30l SAP30-like 50724 ISO
mmu Hmgn5 high-mobility group nucleosome binding domain 5 50887
mmu H2az1 H2A.Z variant histone 1 51788
mmu H1f9 H1.9 linker histone 54388
mmu Sphk2 sphingosine kinase 2 56632
mmu H1f5 H1.5 linker histone, cluster member 56702
mmu Noc2l NOC2 like nucleolar associated transcriptional repressor 57741 ISO
mmu Actr6 ARP6 actin-related protein 6 67019 IBA
mmu Pwwp3a PWWP domain containing 3A, DNA repair factor 68114 IBA,ISO
mmu Thap7 THAP domain containing 7 69009
mmu Znhit1 zinc finger, HIT domain containing 1 70103 IBA
mmu Rnf168 ring finger protein 168 70238 ISO
mmu Glyr1 glyoxylate reductase 1 homolog (Arabidopsis) 74022 ISO
mmu Dnttip1 deoxynucleotidyltransferase, terminal, interacting protein 1 76233 IBA,ISO
mmu H1f1 H1.1 linker histone, cluster member 80838
mmu Arid1a AT rich interactive domain 1A (SWI-like) 93760 IBA,IDA
mmu Smarca1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 93761 IEA
mmu Smarca5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 93762 IEA
mmu Hmgn3 high mobility group nucleosomal binding domain 3 94353
mmu Rcc1 regulator of chromosome condensation 1 100088 ISO
mmu Cabin1 calcineurin binding protein 1 104248 IBA
mmu H1f6 H1.6 linker histone, cluster member 107970
mmu Rnf169 ring finger protein 169 108937 ISO
mmu Supt16 SPT16, facilitates chromatin remodeling subunit 114741 IBA
mmu H1f8 H1.8 linker histone 171506
mmu Arid1b AT rich interactive domain 1B (SWI-like) 239985 IBA
mmu L3mbtl1 L3MBTL1 histone methyl-lysine binding protein 241764 ISO
mmu H1f10 H1.10 linker histone 243529
mmu Mllt6 myeloid/lymphoid or mixed-lineage leukemia; translocated to, 6 246198 IBA,ISO
rno H1f0 H1.0 linker histone 24437
rno H1f6 H1.6 linker histone, cluster member 24438
rno Rnf4 ring finger protein 4 29274 IDA
rno Macroh2a1 macroH2A.1 histone 29384
rno Hmgb2 high mobility group box 2 29395
rno H2az1 H2A.Z variant histone 1 58940
rno Ssrp1 structure specific recognition protein 1 81785 IBA
rno Hmga2 high mobility group AT-hook 2 84017
rno Cabin1 calcineurin binding protein 1 94165 IBA
rno Hmgn3 high mobility group nucleosomal binding domain 3 113990
rno Hmgn2 high mobility group nucleosomal binding domain 2 114637
rno H3f3b H3.3 histone B 117056
rno Dnttip1 deoxynucleotidyltransferase, terminal, interacting protein 1 171437 IBA,IEA,ISO,ISS
rno Arid1b AT-rich interaction domain 1B 282546 IBA
rno Thap7 THAP domain containing 7 287944
rno Parp2 poly (ADP-ribose) polymerase 2 290027 IEA,ISO
rno H1f1 H1.1 linker histone, cluster member 291145
rno Eed embryonic ectoderm development 293104 IBA
rno Arid1a AT-rich interaction domain 1A 297867 IBA,ISO
rno Supt6h SPT6 homolog, histone chaperone and transcription elongation factor 303281 IBA
rno Mllt6 MLLT6, PHD finger containing 303504 IBA,ISO
rno Ezh1 enhancer of zeste 1 polycomb repressive complex 2 subunit 303547
rno Supt16h SPT16 homolog, facilitates chromatin remodeling subunit 305851 IBA
rno Smarca5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 307766 IEA
rno Sphk2 sphingosine kinase 2 308589
rno L3mbtl1 L3MBTL histone methyl-lysine binding protein 1 311613 ISO
rno Hp1bp3 heterochromatin protein 1, binding protein 3 313647 IBA,IEA,ISO,ISS
rno Noc2l NOC2-like nucleolar associated transcriptional repressor 313777 ISO
rno Actr6 actin related protein 6 314718 IBA
rno Uhrf1 ubiquitin-like with PHD and ring finger domains 1 316129
rno Smarca1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 317575 IEA
rno Glyr1 glyoxylate reductase 1 homolog 360477 ISO
rno Sap30l SAP30-like 360531 ISO
rno Hmgn1 high mobility group nucleosome binding domain 1 360704
rno Mllt10 MLLT10, histone lysine methyltransferase DOT1L cofactor 361285 ISO
rno Nap1l4 nucleosome assembly protein 1-like 4 361684 IEA,ISO,ISS
rno Vrk1 VRK serine/threonine kinase 1 362779
rno Pwwp3a PWWP domain containing 3A, DNA repair factor 362838 IBA,ISO,ISS
rno Hira histone cell cycle regulator 363849 IBA
rno H1f10 H1.10 linker histone 500252
rno H1f8 H1.8 linker histone 502875
rno H1f5 H1.5 linker histone, cluster member 680522
rno Hmgn5b high mobility group nucleosome binding domain 5B 681284
rno Rcc1 regulator of chromosome condensation 1 682908 ISO
rno H4f3 H1.3 linker histone, cluster member 684828
rno Rnf169 ring finger protein 169 685009 ISO
rno Hils1 histone linker H1 domain, spermatid-specific 1 690026
rno Rnf168 ring finger protein 168 690043 ISO
rno Hmgn4 high mobility group nucleosomal binding domain 4 100359546
rno Znhit1 zinc finger, HIT-type containing 1 100360077 IBA
rno LOC100360316 hypothetical protein LOC100360316 100360316
rno LOC100361388 high-mobility group nucleosomal binding domain 2-like 100361388
rno H3f3a H3.3 histone A 100361558
rno LOC100363319 high mobility group nucleosomal binding domain 2 100363319
rno Hmgn5 high mobility group nucleosome binding domain 5 100910616
gga HIRA histone cell cycle regulator 374074 IBA
gga ACTR6 ARP6 actin-related protein 6 homolog 395348 IBA
gga H2AFY H2A histone family, member Y 395858
gga HMGN1 high mobility group nucleosome binding domain 1 395999
gga SSRP1 structure specific recognition protein 1 396509 IBA
gga HIST1H110 histone cluster 1, H1.10 (similar to human histone cluster 1, class H1 genes) 417948
gga HIST1H101 histone cluster 1, H1.01 (similar to human histone cluster 1, class H1 genes) 417954
gga HMGN2P46 high mobility group nucleosomal binding domain 2 pseudogene 46 421853
gga HMGN5 high mobility group nucleosome binding domain 5 422278
gga HP1BP3 heterochromatin protein 1 binding protein 3 425543 IBA
gga H2AFZ H2A histone family, member Z 426361
gga EED embryonic ectoderm development 426381 IBA
gga LOC427882 histone H1 427882
gga HIST1H111L histone cluster 1, H1.11L (similar to human histone cluster 1, class H1 genes) 427892
gga HIST1H111R histone cluster 1, H1.11R (similar to human histone cluster 1, class H1 genes) 427896
gga H1F0 H1 histone family, member 0 693250
gga HMGN4 high mobility group nucleosomal binding domain 4 768675
gga HIST1H103 histone cluster 1, H1.03 (similar to human histone cluster 1, class H1 genes) 100858354
dre smarca5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 282615 IEA
dre h1-0 H1.0 linker histone 321618
dre h1-10 H1.10 linker histone 322508
dre actr6 actin related protein 6 324822 IBA
dre sap30l sap30-like 327079 ISS
dre h1m linker histone H1M 327403
dre supt6h SPT6 homolog, histone chaperone and transcription elongation factor 337866 IBA
dre ssrp1a structure specific recognition protein 1a 386844 IBA
dre znhit1 zinc finger, HIT-type containing 1 407699 IBA
dre ssrp1b structure specific recognition protein 1b 449949 IBA
dre mllt10 MLLT10 histone lysine methyltransferase DOT1L cofactor 492342 IBA
dre hmgn3 high mobility group nucleosomal binding domain 3 492345
dre histh1l1 histone H1 like1 550353
dre eed embryonic ectoderm development 550463 IBA
dre zgc:110425 zgc:110425 553782
dre si:ch73-1a9.3 si:ch73-1a9.3 556254
dre hp1bp3 heterochromatin protein 1, binding protein 3 558102 IBA
dre si:ch211-103n10.5 si:ch211-103n10.5 559526
dre smarca1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 559803 IEA
dre si:dkey-261m9.12 si:dkey-261m9.12 560910
dre si:ch73-281n10.2 si:ch73-281n10.2 561719
dre si:ch73-368j24.11 si:ch73-368j24.11 562307
dre supt16h SPT16 homolog, facilitates chromatin remodeling subunit 562348 IBA
dre ube2c ubiquitin-conjugating enzyme E2C 566441 IBA
dre hmgn7 high mobility group nucleosomal binding domain 7 567263
dre hira histone cell cycle regulator a 568076 IBA
dre arid1ab AT rich interactive domain 1Ab (SWI-like) 568161 IBA
dre arid1b AT rich interactive domain 1B (SWI1-like) 569589 IBA
dre hmgn2 high mobility group nucleosomal binding domain 2 569904
dre si:dkey-23a13.17 si:dkey-23a13.17 571135
dre cabin1 calcineurin binding protein 1 571383 IBA
dre si:ch211-113a14.24 si:ch211-113a14.24 573073
dre zgc:153405 zgc:153405 751661
dre si:ch211-113a14.18 si:ch211-113a14.18 792275
dre rnf169 ring finger protein 169 795748 ISS
dre si:dkey-23a13.9 si:dkey-23a13.9 100004336
dre arid1aa AT rich interactive domain 1Aa (SWI-like) 100141358 IBA
dre hmgn6 high mobility group nucleosome binding domain 6 100151347
dre si:dkey-108k21.21 si:dkey-108k21.21 100332815
dre si:dkey-108k21.10 si:dkey-108k21.10 100333275
dre histh1l3 histone H1 like 3 100334868
dre si:ch73-368j24.12 si:ch73-368j24.12 100537402
dre histh1l2 histone H1 like 2 103911343
dme Hira hira 31680 IBA
dme Arp6 Actin-related protein 6 32514 IBA
dme zld zelda 32994 IMP
dme esc extra sexcombs 34595 IBA,IDA
dme escl escl 34611 IBA
dme Iswi Imitation SWI 36390 IEA
dme Ssrp Structure specific recognition protein 37767 IBA,IDA
dme dre4 dre4 38248 IBA,IDA
dme CG42304 uncharacterized protein 38332 IBA
dme Chd3 Chd3 40111 IDA
dme Mi-2 Mi-2 40170 IDA
dme BigH1 Histone H1 variant BigH1 41780
dme Caf1-55 Chromatin assembly factor 1, p55 subunit 41836 IDA
dme osa osa 42130 IBA
dme Spt6 Spt6 44000 IBA
dme Su(z)12 Su(z)12 48071 IDA
dme Ndf Nucleosome-destabilizing factor 192507 IDA
dme His3:CG31613 histone H3 318847
dme CG31917 uncharacterized protein 326171 IBA
dme His3:CG33836 histone H3 3771723
dme His3:CG33842 histone H3 3771729
dme His1:CG33807 histone H1 3771734
dme His3:CG33815 histone H3 3771771
dme His3:CG33830 histone H3 3771792
dme His1:CG33834 histone H1 3771911
dme His3:CG33806 histone H3 3771959
dme His1:CG33855 histone H1 3771991
dme His3:CG33839 histone H3 3772032
dme His1:CG33801 histone H1 3772056
dme His3:CG33803 histone H3 3772149
dme His3:CG33809 histone H3 3772163
dme His3:CG33863 histone H3 3772173
dme His3:CG33866 histone H3 3772189
dme His3:CG33854 histone H3 3772191
dme His3:CG33818 histone H3 3772198
dme His3:CG33857 histone H3 3772231
dme His3:CG33821 histone H3 3772370
dme His3:CG33824 histone H3 3772374
dme His3:CG33845 histone H3 3772421
dme His3:CG33812 histone H3 3772489
dme His3:CG33860 histone H3 3772517
dme His3:CG33851 histone H3 3772518
dme His3:CG33833 histone H3 3772552
dme His3:CG33827 histone H3 3772607
dme His3:CG33848 histone H3 3772619
cel hil-5 Histone H1.5 172242
cel hmg-3 FACT complex subunit ssrp1-B 172250 IBA
cel spt-16 FACT complex subunit spt-16 172984 IBA
cel arp-6 Actin-like protein C08B11.6 174288 IBA
cel emb-5 Suppressor of Ty 6 homolog 175621 IBA
cel hira-1 Hira domain-containing protein;Protein HIRA 175709 IBA
cel isw-1 Chromatin-remodeling complex ATPase chain isw-1 175944 IEA
cel hmg-4 FACT complex subunit SSRP1-A 176052 IBA
cel saeg-2 Suppressor of activated egl-4 protein 2 176303 IBA
cel hil-2 Histone H1.2 177390
cel mes-6 Polycomb protein mes-6 177657 IBA
cel hil-4 Histone H1.4 178866
cel hil-1 Histone H1.X 179993
cel hil-3 Histone H1.3 181073
cel his-24 Histone 24 181545
cel zhit-1 HIT-type domain-containing protein 183878 IBA
cel F56E10.1 Uncharacterized protein 186391 IBA
cel hil-6 Putative histone H1.6 186584
cel let-526 ARID domain-containing protein 3565337 IBA
cfa HMGN2 high mobility group nucleosomal binding domain 2 403686
sce IOC3 Ioc3p 850567 IDA
sce ARP6 Arp6p 850774 IBA,IMP
sce IOC2 Ioc2p 850784 IDA
sce SIR3 chromatin-silencing protein SIR3 851163 IDA
sce SCM3 Scm3p 851416
sce SIR2 NAD-dependent histone deacetylase SIR2 851520 IDA
sce ARP10 Arp10p 851683 IBA
sce DPB4 DNA polymerase epsilon noncatalytic subunit 851699
sce SIR4 chromatin-silencing protein SIR4 851813 IDA
sce DOT1 histone methyltransferase DOT1 852050
sce HIR1 Hir1p 852275 IBA,IMP
sce HPC2 Hpc2p 852516 IMP
sce ISW1 chromatin-remodeling ATPase ISW1 852547 IDA,IEA
sce SPT16 chromatin-remodeling protein SPT16 852665 IDA
sce SPT6 chromatin-remodeling histone chaperone SPT6 853011 IBA,IDA,IMP
sce ARP4 Arp4p 853364
sce HIR3 Hir3p 853605 IBA,IMP
sce HIR2 Hir2p 854203 IBA,IMP
sce SNF2 SWI/SNF catalytic subunit SNF2 854465
sce ISW2 DNA translocase 854480 IEA
sce POB3 FACT complex subunit POB3 854933 IDA
sce ORC1 origin recognition complex subunit 1 854937 IDA
sce VPS71 Vps71p 854966 IBA,IMP
sce RAP1 DNA-binding transcription factor RAP1 855505
sce RTT106 Rtt106p 855515 IBA
sce HHO1 histone H1 855976
sce NHP6A high-mobility group nucleosome-binding protein 856165 IDA
spo phf1 PHD finger domain-containing protein Phf1 2539406 IDA
spo set9 histone lysine methyltransferase Set9 2539545 IPI
spo arp6 actin-like protein Arp6 2539564 IBA
spo lsd1 histone demethylase SWIRM1 2539805 IDA
spo chp2 chromodomain protein 2 2540047
spo slm9 hira protein Slm9 2540128 IBA
spo hip1 histone chaperone Hip1 2540219 IBA
spo hip3 HIRA-interacting protein Hip3 2540227 IBA
spo pdp1 PWWP domain protein Pdp1 2540354
spo vps71 Swr1 complex subunit Vps71 2540512 IBA
spo pob3 FACT complex component Pob3 2541088 IBA
spo mit1 SHREC complex subunit Mit1 2541336 IDA
spo spt16 FACT complex component Spt16 2541355 IBA
spo spt6 putative transcription elongation factor Spt6 2541605 IBA
spo swi6 chromodomain protein Swi6 2541633
spo lsd2 putative histone demethylase SWIRM2 2541832 IDA
spo mug183 putative Rtt106-like histone chaperone mug183 2542055 IBA
spo phf2 Lsd1/2 complex PHD finger domain-containing protein Phf2 2542236 IDA
spo chp1 chromodomain protein Chp1 2542239
spo hrp3 ATP-dependent DNA helicase Hrp3 2543064 IDA
spo SPAC631.02 putative bromodomain-containing protein 2543426


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