GO:0016363 nuclear matrix

110 hsa genes in this database.
89 mmu genes in this database.
99 rno genes in this database.
11 gga genes in this database.
11 dre genes in this database.
5 dme genes in this database.
2 cel genes in this database.
2 cfa genes in this database.
3 sce genes in this database.
2 spo genes in this database.

[QuickGO]

term: nuclear matrix
goid: GO:0016363


Shaded genes do not have GeneChip data. The output was limited up to 100 for each of species.
Species Symbol Gene
coexpression
Locus
page
Full name* Entrez Gene ID Evidence*
hsa ALOX5 arachidonate 5-lipoxygenase 240 IDA
hsa BLM BLM RecQ like helicase 641 IDA
hsa CAD carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase 790 IDA
hsa RUNX1T1 RUNX1 partner transcriptional co-repressor 1 862 IDA
hsa CEBPB CCAAT enhancer binding protein beta 1051 IEA
hsa CENPF centromere protein F 1063 IDA
hsa CFL1 cofilin 1 1072 IEA
hsa CFL2 cofilin 2 1073 IEA
hsa ERCC8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit 1161 IDA
hsa CSNK2B casein kinase 2 beta 1460 IEA
hsa DGKQ diacylglycerol kinase theta 1609 ISS
hsa DNMT3A DNA methyltransferase 3 alpha 1788 IDA
hsa DNTT DNA nucleotidylexotransferase 1791 IEA
hsa ATN1 atrophin 1 1822 IDA
hsa GFI1 growth factor independent 1 transcriptional repressor 2672 IDA
hsa GHRHR growth hormone releasing hormone receptor 2692 IDA
hsa HLCS holocarboxylase synthetase 3141 IDA
hsa HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 3181 ISS
hsa HNRNPU heterogeneous nuclear ribonucleoprotein U 3192 IBA,IDA
hsa KRT8 keratin 8 3856 IEA
hsa LMNA lamin A/C 4000 IDA
hsa LMNB1 lamin B1 4001 IEA
hsa MBD1 methyl-CpG binding domain protein 1 4152 ISS
hsa MEN1 menin 1 4221 IDA
hsa ATXN3 ataxin 3 4287 IEA
hsa MYB MYB proto-oncogene, transcription factor 4602 NAS
hsa HNRNPM heterogeneous nuclear ribonucleoprotein M 4670 IDA
hsa NONO non-POU domain containing octamer binding 4841 IDA
hsa NUMA1 nuclear mitotic apparatus protein 1 4926 IDA
hsa OGG1 8-oxoguanine DNA glycosylase 4968 IDA
hsa CHMP1A charged multivesicular body protein 1A 5119 IDA
hsa PML PML nuclear body scaffold 5371 IEA
hsa POLA1 DNA polymerase alpha 1, catalytic subunit 5422 IDA
hsa PRKCD protein kinase C delta 5580 IEA
hsa PRKCZ protein kinase C zeta 5590 IEA
hsa PSMA6 proteasome 20S subunit alpha 6 5687 ISS
hsa RAD21 RAD21 cohesin complex component 5885 IDA
hsa RGS12 regulator of G protein signaling 12 6002 IEA
hsa RNASEL ribonuclease L 6041 IEA
hsa SATB1 SATB homeobox 1 6304 IEA
hsa ATXN1 ataxin 1 6310 IDA
hsa ATXN7 ataxin 7 6314 IEA
hsa SFPQ splicing factor proline and glutamine rich 6421 IDA
hsa SPARC secreted protein acidic and cysteine rich 6678 IDA
hsa SRPK1 SRSF protein kinase 1 6732 IEA
hsa TEP1 telomerase associated protein 1 7011 IDA
hsa TGFB1I1 transforming growth factor beta 1 induced transcript 1 7041 IEA
hsa TP53 tumor protein p53 7157 IDA
hsa VIM vimentin 7431 IEA
hsa YY1 YY1 transcription factor 7528 IEA
hsa DDX39B DExD-box helicase 39B 7919 IEA
hsa YEATS4 YEATS domain containing 4 8089 NAS
hsa SMC1A structural maintenance of chromosomes 1A 8243 IDA
hsa GFI1B growth factor independent 1B transcriptional repressor 8328 IDA
hsa ENC1 ectodermal-neural cortex 1 8507 IEA
hsa HAT1 histone acetyltransferase 1 8520 IEA
hsa CASK calcium/calmodulin dependent serine protein kinase 8573 IDA
hsa RUVBL1 RuvB like AAA ATPase 1 8607 IEA
hsa SMC3 structural maintenance of chromosomes 3 9126 IDA
hsa PPIG peptidylprolyl isomerase G 9360 IEA
hsa NCOR2 nuclear receptor corepressor 2 9612 IDA
hsa MATR3 matrin 3 9782 IEA
hsa THOC1 THO complex 1 9984 IEA
hsa TENM1 teneurin transmembrane protein 1 10178 ISS
hsa DCAF7 DDB1 and CUL4 associated factor 7 10238 IDA
hsa SRRM1 serine and arginine repetitive matrix 1 10250 IEA
hsa AKAP8 A-kinase anchoring protein 8 10270 IBA,ISS
hsa STAG1 stromal antigen 1 10274 IDA
hsa MAEA macrophage erythroblast attacher, E3 ubiquitin ligase 10296 IDA
hsa BASP1 brain abundant membrane attached signal protein 1 10409 IDA
hsa ARFGEF1 ADP ribosylation factor guanine nucleotide exchange factor 1 10565 IEA
hsa SORBS1 sorbin and SH3 domain containing 1 10580 IEA
hsa STAG2 stromal antigen 2 10735 IDA
hsa RUVBL2 RuvB like AAA ATPase 2 10856 IEA
hsa XPOT exportin for tRNA 11260 IBA
hsa PHB2 prohibitin 2 11331 IDA
hsa SCAF8 SR-related CTD associated factor 8 22828 ISS
hsa MORC2 MORC family CW-type zinc finger 2 22880 IDA
hsa SNW1 SNW domain containing 1 22938 IDA
hsa KIN Kin17 DNA and RNA binding protein 22944 IDA
hsa PAXIP1 PAX interacting protein 1 22976 IEA
hsa SATB2 SATB homeobox 2 23314 IEA
hsa MORC3 MORC family CW-type zinc finger 3 23515 IEA
hsa KIF4A kinesin family member 4A 24137 IEA
hsa IFFO1 intermediate filament family orphan 1 25900 IDA
hsa AHCTF1 AT-hook containing transcription factor 1 25909 IEA
hsa CLIC4 chloride intracellular channel 4 25932 IDA
hsa NSMF NMDA receptor synaptonuclear signaling and neuronal migration factor 26012 ISS
hsa TINF2 TERF1 interacting nuclear factor 2 26277 IEA
hsa NUFIP1 nuclear FMR1 interacting protein 1 26747 IDA
hsa AKAP8L A-kinase anchoring protein 8 like 26993 IBA,IDA
hsa LGALS13 galectin 13 29124 IDA
hsa UHRF1 ubiquitin like with PHD and ring finger domains 1 29128 ISS
hsa CXXC1 CXXC finger protein 1 30827 IEA
hsa PIAS4 protein inhibitor of activated STAT 4 51588 IEA
hsa FIGN fidgetin, microtubule severing factor 55137 ISS
hsa PSPC1 paraspeckle component 1 55269 IEA
hsa PRPF40A pre-mRNA processing factor 40 homolog A 55660 IDA
hsa LRIF1 ligand dependent nuclear receptor interacting factor 1 55791 IEA
hsa SPTBN4 spectrin beta, non-erythrocytic 4 57731 IDA
mmu Alox5 arachidonate 5-lipoxygenase 11689 ISO
mmu Mat1a methionine adenosyltransferase I, alpha 11720 ISO
mmu Anp32a acidic (leucine-rich) nuclear phosphoprotein 32 family, member A 11737 IPI
mmu Phb2 prohibitin 2 12034 ISO
mmu Blm Bloom syndrome, RecQ like helicase 12144 ISO
mmu Cask calcium/calmodulin-dependent serine protein kinase (MAGUK family) 12361 ISO
mmu Runx1t1 RUNX1 translocation partner 1 12395 ISO
mmu Cebpa CCAAT/enhancer binding protein (C/EBP), alpha 12606 ISO
mmu Cebpb CCAAT/enhancer binding protein (C/EBP), beta 12608 IDA,ISO
mmu Csnk2b casein kinase 2, beta polypeptide 13001 ISO
mmu Smc3 structural maintenance of chromosomes 3 13006 ISO
mmu Dnmt3a DNA methyltransferase 3A 13435 ISO
mmu Atn1 atrophin 1 13498 ISO
mmu Enc1 ectodermal-neural cortex 1 13803 ISO
mmu Gfi1 growth factor independent 1 transcription repressor 14581 ISO
mmu Gfi1b growth factor independent 1B 14582 ISO
mmu Ghrhr growth hormone releasing hormone receptor 14602 ISO
mmu Hes1 hes family bHLH transcription factor 1 15205 ISO
mmu Kin Kin17 DNA and RNA binding protein 16588 ISO
mmu Lmna lamin A 16905 ISO
mmu Lmnb1 lamin B1 16906 IDA,ISO
mmu Matr3 matrin 3 17184 ISO
mmu Mbd1 methyl-CpG binding domain protein 1 17190 IDA
mmu Men1 multiple endocrine neoplasia 1 17283 ISO
mmu Uhrf1 ubiquitin-like, containing PHD and RING finger domains, 1 18140 IDA
mmu Npm1 nucleophosmin 1 18148 ISO
mmu Ogg1 8-oxoguanine DNA-glycosylase 1 18294 ISO
mmu Prkcd protein kinase C, delta 18753 IDA
mmu Prkcz protein kinase C, zeta 18762 IDA
mmu Pml promyelocytic leukemia 18854 IDA,ISO
mmu Pola1 polymerase (DNA directed), alpha 1 18968 ISO
mmu Rad21 RAD21 cohesin complex component 19357 ISO
mmu Satb1 special AT-rich sequence binding protein 1 20230 IDA
mmu Atxn1 ataxin 1 20238 ISO
mmu Sorbs1 sorbin and SH3 domain containing 1 20411 IDA
mmu Ncor2 nuclear receptor co-repressor 2 20602 ISO
mmu Sparc secreted acidic cysteine rich glycoprotein 20692 ISO
mmu Stag1 stromal antigen 1 20842 ISO
mmu Stag2 stromal antigen 2 20843 ISO
mmu Tep1 telomerase associated protein 1 21745 ISO
mmu Trp53 transformation related protein 53 22059 ISO
mmu Vdr vitamin D (1,25-dihydroxyvitamin D3) receptor 22337 ISO
mmu Yy1 YY1 transcription factor 22632 ISO
mmu Gmcl1 germ cell-less, spermatogenesis associated 1 23885 IDA
mmu Rnasel ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent) 24014 ISO
mmu Smc1a structural maintenance of chromosomes 1A 24061 ISO
mmu Psma6 proteasome subunit alpha 6 26443 IDA
mmu Nufip1 nuclear fragile X mental retardation protein interacting protein 1 27275 ISO,ISS
mmu Clic4 chloride intracellular channel 4 (mitochondrial) 29876 ISO
mmu Srrm1 serine/arginine repetitive matrix 1 51796 ISO
mmu Hnrnpu heterogeneous nuclear ribonucleoprotein U 51810 IBA,ISO
mmu Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 53379 ISO
mmu Nono non-POU-domain-containing, octamer binding protein 53610 ISO
mmu Ddx39b DEAD box helicase 39b 53817 ISO
mmu Akap8l A kinase (PRKA) anchor protein 8-like 54194 IBA,IDA,ISO
mmu Zfp326 zinc finger protein 326 54367 IDA
mmu Tcerg1 transcription elongation regulator 1 (CA150) 56070 ISS
mmu Prpf40a pre-mRNA processing factor 40A 56194 IDA,ISO
mmu Akap8 A kinase (PRKA) anchor protein 8 56399 IBA,IDA,ISO
mmu Ruvbl1 RuvB-like protein 1 56505 ISO
mmu Nsmf NMDA receptor synaptonuclear signaling and neuronal migration factor 56876 ISO
mmu Maea macrophage erythroblast attacher 59003 ISO
mmu Pias4 protein inhibitor of activated STAT 4 59004 IDA
mmu Fign fidgetin 60344 IDA
mmu Snw1 SNW domain containing 1 66354 ISO
mmu Kat8 K(lysine) acetyltransferase 8 67773 IDA
mmu Phf5a PHD finger protein 5A 68479 IDA
mmu Cad carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase 69719 ISO
mmu Basp1 brain abundant, membrane attached signal protein 1 70350 ISO
mmu Sfpq splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) 71514 ISO
mmu Dcaf7 DDB1 and CUL4 associated factor 7 71833 ISO
mmu Ercc8 excision repaiross-complementing rodent repair deficiency, complementation group 8 71991 ISO
mmu Xpot exportin, tRNA (nuclear export receptor for tRNAs) 73192 IBA
mmu Cxxc1 CXXC finger 1 (PHD domain) 74322 IDA
mmu Morc2a microrchidia 2A 74522 ISO
mmu Hnrnpm heterogeneous nuclear ribonucleoprotein M 76936 ISO
mmu Sptbn4 spectrin beta, non-erythrocytic 4 80297 ISO,ISS
mmu Sf3b1 splicing factor 3b, subunit 1 81898 IDA
mmu Numa1 nuclear mitotic apparatus protein 1 101706 IDA,ISO
mmu Scaf8 SR-related CTD-associated factor 8 106583 ISO
mmu Cenpf centromere protein F 108000 ISO
mmu Dgkq diacylglycerol kinase, theta 110524 ISO
mmu Hlcs holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase) 110948 ISO
mmu Ahctf1 AT hook containing transcription factor 1 226747 IDA
mmu Ppig peptidyl-prolyl isomerase G (cyclophilin G) 228005 ISO
mmu Chmp1a charged multivesicular body protein 1A 234852 ISO
mmu Morc2b microrchidia 2B 240069 ISO
mmu Iffo1 intermediate filament family orphan 1 320678 ISO
mmu Zfp703 zinc finger protein 703 353310 ISO
rno Cad carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase 24240 ISO
rno Cebpa CCAAT/enhancer binding protein alpha 24252 IDA
rno Cebpb CCAAT/enhancer binding protein beta 24253 IDA,ISO
rno Gfi1 growth factor independent 1 transcriptional repressor 24388 ISO
rno Sparc secreted protein acidic and cysteine rich 24791 ISO
rno Tp53 tumor protein p53 24842 ISO
rno Vdr vitamin D receptor 24873 IDA
rno Yy1 YY1 transcription factor 24919 IDA
rno Atxn1 ataxin 1 25049 ISO,ISS
rno Alox5 arachidonate 5-lipoxygenase 25290 IEA,ISO
rno Ghrhr growth hormone releasing hormone receptor 25321 ISO
rno Mat1a methionine adenosyltransferase 1A 25331 IDA
rno Npm1 nucleophosmin 1 25498 IDA
rno Prkcz protein kinase C, zeta 25522 ISO
rno Krt8 keratin 8 25626 IEA
rno Matr3 matrin 3 29150 IDA
rno Sptbn2 spectrin, beta, non-erythrocytic 2 29211 TAS
rno Cfl1 cofilin 1 29271 IEA
rno Men1 menin 1 29417 ISO
rno Smc3 structural maintenance of chromosomes 3 29486 IEA,ISO,ISS
rno Atn1 atrophin 1 29515 ISO
rno Hes1 hes family bHLH transcription factor 1 29577 IDA
rno Cask calcium/calmodulin dependent serine protein kinase 29647 ISO
rno Psma6 proteasome 20S subunit alpha 6 29673 ISO,ISS
rno Lmna lamin A/C 60374 IDA,IEA,ISO
rno Smc1a structural maintenance of chromosomes 1A 63996 IEA,ISO
rno Basp1 brain abundant, membrane attached signal protein 1 64160 IEA,ISO
rno Tep1 telomerase associated protein 1 64523 ISO
rno Ruvbl1 RuvB-like AAA ATPase 1 65137 IDA
rno Ogg1 8-oxoguanine DNA glycosylase 81528 ISO,ISS
rno Csnk2b casein kinase 2 beta 81650 IDA
rno Vim vimentin 81818 IEA
rno Ppig peptidylprolyl isomerase G 83624 IDA
rno Clic4 chloride intracellular channel 4 83718 IEA,ISO
rno Sf3b1 splicing factor 3b, subunit 1 84486 ISO
rno Tgfb1i1 transforming growth factor beta 1 induced transcript 1 84574 IEA
rno Pola1 DNA polymerase alpha 1, catalytic subunit 85241 ISO,ISS
rno Ddx39b DExD-box helicase 39B 114612 IDA
rno Phb2 prohibitin 2 114766 ISO,ISS
rno Akap8 A-kinase anchoring protein 8 116633 IBA,IDA,ISO
rno Hnrnpm heterogeneous nuclear ribonucleoprotein M 116655 IEA,ISO
rno Lmnb1 lamin B1 116685 IDA,IEA,ISO
rno Hnrnpu heterogeneous nuclear ribonucleoprotein U 117280 IBA,IEA,ISO
rno Nsmf NMDA receptor synaptonuclear signaling and neuronal migration factor 117536 IDA
rno Prkcd protein kinase C, delta 170538 IEA,ISO
rno Phf5a PHD finger protein 5A 192246 ISO
rno Scaf8 SR-related CTD-associated factor 8 245926 IDA
rno Sfpq splicing factor proline and glutamine rich 252855 ISO
rno Cenpf centromere protein F 257649 ISO
rno Hlcs holocarboxylase synthetase 288240 ISO
rno Morc2 MORC family CW-type zinc finger 2 289736 ISO
rno Mbd1 methyl-CpG binding domain protein 1 291439 ISO
rno Cxxc1 CXXC finger protein 1 291440 ISO
rno Dntt DNA nucleotidylexotransferase 294051 IDA
rno Enc1 ectodermal-neural cortex 1 294674 IDA
rno Krt18 keratin 18 294853 IEA
rno Prpf40a pre-mRNA processing factor 40 homolog A 295607 ISO
rno Fign fidgetin, microtubule severing factor 295649 ISO
rno Hat1 histone acetyltransferase 1 296501 IEA
rno Maea macrophage erythroblast attacher, E3 ubiquitin ligase 298982 ISO
rno Akap8l A-kinase anchoring protein 8 like 299569 IBA,ISO
rno Da2-19 uncharacterized LOC302729 302729 IEA
rno Dcaf7 DDB1 and CUL4 associated factor 7 303602 ISO
rno Pspc1 paraspeckle component 1 305910 IEA
rno Sptbn4 spectrin, beta, non-erythrocytic 4 308458 ISO
rno Blm BLM RecQ like helicase 308755 ISO
rno Numa1 nuclear mitotic apparatus protein 1 308870 IDA,ISO
rno Ercc8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit 310071 ISO
rno Kat8 lysine acetyltransferase 8 310194 ISO
rno Lrif1 ligand dependent nuclear receptor interacting factor 1 310775 IEA
rno Gfi1b growth factor independent 1B transcriptional repressor 311832 ISO
rno Gmcl1 germ cell-less 1, spermatogenesis associated 312516 ISO
rno Arfgef1 ADP ribosylation factor guanine nucleotide exchange factor 1 312915 IEA
rno Stag2 stromal antigen 2 313304 ISO
rno Xpot exportin for tRNA 314879 IBA
rno Rad21 RAD21 cohesin complex component 314949 ISO
rno Pml PML nuclear body scaffold 315713 ISO
rno Stag1 stromal antigen 1 315958 ISO
rno Uhrf1 ubiquitin-like with PHD and ring finger domains 1 316129 IEA,ISO
rno Satb1 SATB homeobox 1 316164 ISO
rno Nono non-POU domain containing, octamer-binding 317259 ISO
rno Rnasel ribonuclease L 359726 IDA
rno Ncor2 nuclear receptor co-repressor 2 360801 ISO
rno Ahctf1 AT hook containing transcription factor 1 360886 ISO
rno Phactr3 phosphatase and actin regulator 3 362284 IEA
rno Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 362361 IDA
rno Iffo1 intermediate filament family orphan 1 362437 ISO
rno Runx1t1 RUNX1 partner transcriptional co-repressor 1 362489 ISO
rno Pias4 protein inhibitor of activated STAT, 4 362827 ISO
rno Nufip1 nuclear FMR1 interacting protein 1 364430 ISO
rno Chmp1a charged multivesicular body protein 1A 365024 ISO
rno Dnmt3a DNA methyltransferase 3 alpha 444984 ISO,ISS
rno Snw1 SNW domain containing 1 500695 ISO
rno Zfp703 zinc finger protein 703 680717 ISO
rno Zfp326 zinc finger protein 326 682914 ISO
rno Sorbs1 sorbin and SH3 domain containing 1 686098 ISO
rno Kin Kin17 DNA and RNA binding protein 689197 ISO
rno Cenpw centromere protein W 689399 IEA
rno Dgkq diacylglycerol kinase, theta 100361138 IMP
gga BASP1 brain abundant membrane attached signal protein 1 373905 IEA
gga TENM1 teneurin transmembrane protein 1 395668 IDA
gga GFI1B growth factor independent 1B transcriptional repressor 395977 IEA
gga CEBPB CCAAT/enhancer binding protein beta 396185 IEA
gga PGR progesterone receptor 396198 IDA
gga PSPC1 paraspeckle component 1 418955 IEA
gga VIM vimentin 420519 IEA
gga DNMT3A DNA methyltransferase 3 alpha 421991 ISS
gga CFL2 cofilin 2 423320 IEA
gga MAEA macrophage erythroblast attacher 426024 IEA
gga PHB2 prohibitin 2 771124 ISS
dre znf703 zinc finger protein 703 114429 ISS
dre maea macrophage erythroblast attacher, E3 ubiquitin ligase 321575 IEA
dre rad21a RAD21 cohesin complex component a 322275 IEA
dre hnrnpub heterogeneous nuclear ribonucleoprotein Ub 334490 IBA
dre chmp1a charged multivesicular body protein 1A 393535 IEA
dre fign fidgetin 553599 IEA
dre xpot exportin, tRNA (nuclear export receptor for tRNAs) 558020 IBA
dre hnrnpua heterogeneous nuclear ribonucleoprotein Ua 566326 IBA
dre nsmfb NMDA receptor synaptonuclear signaling and neuronal migration factor b 569891 IEA
dre pspc1 paraspeckle component 1 692285 IEA
dre krt8 keratin 8 797433 IEA
dme Mt2 Methyltransferase 2 34632 IDA
dme Mtor Megator 36264 IDA
dme px plexus 37573 IDA
dme RpS3 Ribosomal protein S3 42761 IDA
dme Saf-B Scaffold attachment factor B 42958 IDA
cel maea-1 E3 ubiquitin-protein transferase MAEA 173248 IEA
cel xpo-3 Exportin-T 177581 IBA
cfa AKAP8 A-kinase anchoring protein 8 474362 IEA
cfa GFI1 growth factor independent 1 transcriptional repressor 490156 IEA
sce CDC4 SCF ubiquitin ligase complex subunit CDC4 850539 IDA
sce COF1 cofilin 850676 IEA
sce LOS1 Ran GTPase-binding protein LOS1 853630 IBA,IDA
spo los1 putative karyopherin exportin T Los1 2541311 IBA,ISO
spo adf1 cofilin 2541738 IEA


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