GO:0003684 damaged DNA binding

69 hsa genes in this database.
61 mmu genes in this database.
61 rno genes in this database.
13 gga genes in this database.
33 dre genes in this database.
24 dme genes in this database.
23 cel genes in this database.
1 cfa genes in this database.
25 sce genes in this database.
30 spo genes in this database.

[QuickGO]

term: damaged DNA binding
goid: GO:0003684

Shaded genes do not have GeneChip data. The output was limited up to 100 for each of species.
Species Symbol Gene
coexpression		 Locus
page 		Full name* Entrez Gene ID Evidence*
hsa APEX1 apurinic/apyrimidinic endodeoxyribonuclease 1 328 IDA
hsa BLM BLM RecQ like helicase 641
hsa BRCA1 BRCA1 DNA repair associated 672 IEA
hsa CREBBP CREB binding protein 1387 IDA
hsa CRY2 cryptochrome circadian regulator 2 1408 IDA
hsa DDB1 damage specific DNA binding protein 1 1642 IDA
hsa DDB2 damage specific DNA binding protein 2 1643 IBA,IDA
hsa EP300 E1A binding protein p300 2033 IDA
hsa ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit 2067 IBA,IDA
hsa ERCC2 ERCC excision repair 2, TFIIH core complex helicase subunit 2068 IBA
hsa ERCC3 ERCC excision repair 3, TFIIH core complex helicase subunit 2071 NAS
hsa ERCC4 ERCC excision repair 4, endonuclease catalytic subunit 2072 IBA,IMP
hsa ERCC5 ERCC excision repair 5, endonuclease 2073 IDA
hsa FANCG FA complementation group G 2189 TAS
hsa FEN1 flap structure-specific endonuclease 1 2237 TAS
hsa XRCC6 X-ray repair cross complementing 6 2547 IEA
hsa MSH6 mutS homolog 6 2956
hsa H2AX H2A.X variant histone 3014 IEA
hsa HMGB1 high mobility group box 1 3146 IDA,ISS
hsa HMGB2 high mobility group box 2 3148 IDA
hsa MPG N-methylpurine DNA glycosylase 4350 TAS
hsa MSH2 mutS homolog 2 4436
hsa MSH3 mutS homolog 3 4437
hsa MUTYH mutY DNA glycosylase 4595
hsa NBN nibrin 4683 IBA,IC
hsa NTHL1 nth like DNA glycosylase 1 4913 IDA
hsa OGG1 8-oxoguanine DNA glycosylase 4968 IDA
hsa PCNA proliferating cell nuclear antigen 5111 IDA
hsa POLB DNA polymerase beta 5423 IEA
hsa POLD1 DNA polymerase delta 1, catalytic subunit 5424 IDA
hsa POLH DNA polymerase eta 5429 IEA
hsa RAD1 RAD1 checkpoint DNA exonuclease 5810 TAS
hsa RAD23A RAD23 homolog A, nucleotide excision repair protein 5886 IEA
hsa RAD23B RAD23 homolog B, nucleotide excision repair protein 5887 IEA
hsa RBBP8 RB binding protein 8, endonuclease 5932 IBA,IDA
hsa RPA1 replication protein A1 6117 IBA,IDA
hsa RPA2 replication protein A2 6118 IDA
hsa RPA3 replication protein A3 6119 IBA,IDA
hsa RPS3 ribosomal protein S3 6188 IDA
hsa TDG thymine DNA glycosylase 6996 TAS
hsa TP53BP1 tumor protein p53 binding protein 1 7158 IEA
hsa UNG uracil DNA glycosylase 7374 IDA
hsa WRN WRN RecQ like helicase 7486
hsa XPA XPA, DNA damage recognition and repair factor 7507 IBA,IDA
hsa XPC XPC complex subunit, DNA damage recognition and repair factor 7508 IBA,IDA
hsa XRCC1 X-ray repair cross complementing 1 7515
hsa XRCC5 X-ray repair cross complementing 5 7520 IEA
hsa CUL4B cullin 4B 8450 IDA
hsa TP63 tumor protein p63 8626 IEA
hsa RECQL4 RecQ like helicase 4 9401
hsa DCLRE1A DNA cross-link repair 1A 9937 IBA
hsa POLQ DNA polymerase theta 10721 TAS
hsa POLI DNA polymerase iota 11201 IEA
hsa PNKP polynucleotide kinase 3'-phosphatase 11284 NAS
hsa POT1 protection of telomeres 1 25913
hsa POLK DNA polymerase kappa 51426 IEA
hsa REV1 REV1 DNA directed polymerase 51455 IEA
hsa APTX aprataxin 54840 IDA
hsa NEIL3 nei like DNA glycosylase 3 55247 ISS
hsa KDM4D lysine demethylase 4D 55693 IEA
hsa RAD18 RAD18 E3 ubiquitin protein ligase 56852 NAS
hsa DCLRE1C DNA cross-link repair 1C 64421 IBA
hsa DCLRE1B DNA cross-link repair 1B 64858 IBA
hsa AUNIP aurora kinase A and ninein interacting protein 79000 IDA
hsa NEIL1 nei like DNA glycosylase 1 79661 IEA
hsa SMC6 structural maintenance of chromosomes 6 79677 IBA
hsa SDE2 SDE2 telomere maintenance homolog 163859 IDA
hsa NEIL2 nei like DNA glycosylase 2 252969 IEA
hsa LOC100133315 XRCC1 N-terminal domain containing 1-like 100133315 IEA
mmu Apex1 apurinic/apyrimidinic endonuclease 1 11792 ISO
mmu Blm Bloom syndrome, RecQ like helicase 12144
mmu Brca1 breast cancer 1, early onset 12189 IDA
mmu Crebbp CREB binding protein 12914 ISO
mmu Cry2 cryptochrome 2 (photolyase-like) 12953 ISO
mmu Ddb1 damage specific DNA binding protein 1 13194 ISO,ISO
mmu Ercc1 excision repair cross-complementing rodent repair deficiency, complementation group 1 13870 IBA,ISO
mmu Ercc2 excision repair cross-complementing rodent repair deficiency, complementation group 2 13871 IBA
mmu Xrcc6 X-ray repair complementing defective repair in Chinese hamster cells 6 14375 IEA
mmu H2ax H2A.X variant histone 15270 IDA
mmu Hmgb1 high mobility group box 1 15289 ISO
mmu Msh2 mutS homolog 2 17685 IMP
mmu Msh3 mutS homolog 3 17686 IGI
mmu Msh6 mutS homolog 6 17688 IGI,IMP
mmu Nthl1 nth (endonuclease III)-like 1 (E.coli) 18207 ISO
mmu Ogg1 8-oxoguanine DNA-glycosylase 1 18294 ISO
mmu Pcna proliferating cell nuclear antigen 18538 ISO
mmu Polb polymerase (DNA directed), beta 18970 ISO
mmu Pold1 polymerase (DNA directed), delta 1, catalytic subunit 18971 ISO
mmu Rad23a RAD23 homolog A, nucleotide excision repair protein 19358 IEA
mmu Rad23b RAD23 homolog B, nucleotide excision repair protein 19359 IEA
mmu Rpa2 replication protein A2 19891 ISO
mmu Trp63 transformation related protein 63 22061 IDA
mmu Trpc2 transient receptor potential cation channel, subfamily C, member 2 22064 IEA
mmu Ung uracil DNA glycosylase 22256 ISO
mmu Wrn Werner syndrome RecQ like helicase 22427
mmu Xpa xeroderma pigmentosum, complementation group A 22590 IBA,ISO
mmu Xpc xeroderma pigmentosum, complementation group C 22591 IBA,IDA,ISO
mmu Ercc5 excision repair cross-complementing rodent repair deficiency, complementation group 5 22592 ISO
mmu Xrcc1 X-ray repair complementing defective repair in Chinese hamster cells 1 22594 IEA
mmu Xrcc5 X-ray repair complementing defective repair in Chinese hamster cells 5 22596 IEA
mmu Poli polymerase (DNA directed), iota 26447 IEA
mmu Polk polymerase (DNA directed), kappa 27015 IEA
mmu Rps3 ribosomal protein S3 27050 ISO
mmu Trp53bp1 transformation related protein 53 binding protein 1 27223 IDA
mmu Nbn nibrin 27354 IBA,IDA
mmu Ercc4 excision repair cross-complementing rodent repair deficiency, complementation group 4 50505 IBA,ISO
mmu Dclre1a DNA cross-link repair 1A 55947 IBA
mmu Rev1 REV1, DNA directed polymerase 56210 IEA
mmu Aptx aprataxin 66408 ISO
mmu Smc6 structural maintenance of chromosomes 6 67241 IBA
mmu Rpa3 replication protein A3 68240 IBA,ISO
mmu Rpa1 replication protein A1 68275 IBA,ISO
mmu Aunip aurora kinase A and ninein interacting protein 69885 ISO
mmu Mutyh mutY DNA glycosylase 70603
mmu Cul4b cullin 4B 72584 ISO
mmu Neil1 nei endonuclease VIII-like 1 (E. coli) 72774 IEA
mmu Pot1b protection of telomeres 1B 72836
mmu Recql4 RecQ protein-like 4 79456
mmu Polh polymerase (DNA directed), eta (RAD 30 related) 80905 IEA
mmu Hmgb2 high mobility group box 2 97165 ISO
mmu Pot1a protection of telomeres 1A 101185
mmu Ddb2 damage specific DNA binding protein 2 107986 IBA,ISO
mmu Dclre1b DNA cross-link repair 1B 140917 IBA
mmu Sde2 SDE2 telomere maintenance homolog (S. pombe) 208768 ISO
mmu Rbbp8 retinoblastoma binding protein 8, endonuclease 225182 IBA,ISO
mmu Dclre1c DNA cross-link repair 1C 227525 IBA
mmu Neil3 nei like 3 (E. coli) 234258 IEA
mmu Kdm4d lysine (K)-specific demethylase 4D 244694 IDA
mmu Ep300 E1A binding protein p300 328572 ISO
mmu Neil2 nei like 2 (E. coli) 382913 IEA
rno Xrcc6 X-ray repair cross complementing 6 25019 IEA
rno Hmgb1 high mobility group box 1 25459 ISO
rno Pcna proliferating cell nuclear antigen 25737 ISO,ISS
rno Polb DNA polymerase beta 29240 IDA
rno Hmgb2 high mobility group box 2 29395 ISO
rno Nthl1 nth-like DNA glycosylase 1 29541 IEA,ISO
rno Crebbp CREB binding protein 54244 IEA,ISO,ISS
rno Rpa2 replication protein A2 59102 ISO,ISS
rno Pold1 DNA polymerase delta 1, catalytic subunit 59294 IEA,ISO,ISS
rno Ddb1 damage-specific DNA binding protein 1 64470 IEA,IMP,ISO
rno Trpc2 transient receptor potential cation channel subfamily C member 2 64573 IEA
rno Apex1 apurinic/apyrimidinic endodeoxyribonuclease 1 79116 ISO,ISS
rno Ogg1 8-oxoguanine DNA glycosylase 81528 IDA,ISO
rno Msh2 mutS homolog 2 81709 ISO
rno Xrcc1 X-ray repair cross complementing 1 84495
rno Nbn nibrin 85482 IBA,IEA,ISO
rno Rps3 ribosomal protein S3 140654 ISO
rno Mutyh mutY DNA glycosylase 170841
rno Ep300 E1A binding protein p300 170915 ISO
rno Cry2 cryptochrome circadian regulator 2 170917 IEA,ISO
rno Polk DNA polymerase kappa 171525 IEA
rno Tp63 tumor protein p63 246334 ISO
rno Dclre1c DNA cross-link repair 1C 259171 IBA
rno Aptx aprataxin 259271 ISO
rno Rpa1 replication protein A1 287524 IBA,ISO
rno Sde2 SDE2 telomere maintenance homolog 289315 IEA,ISO
rno Neil3 nei-like DNA glycosylase 3 290729 IEA
rno Wrn WRN RecQ like helicase 290805
rno Poli DNA polymerase iota 291526 IEA
rno Rbbp8 RB binding protein 8, endonuclease 291787 IBA,ISO
rno Dclre1a DNA cross-link repair 1A 292127 IBA
rno Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit 292673 IBA,ISO
rno Tp53bp1 tumor protein p53 binding protein 1 296099 ISO
rno Rpa3 replication protein A3 296883 IBA,ISO
rno Rad23b RAD23 homolog B, nucleotide excision repair protein 298012 IEA
rno Xpa XPA, DNA damage recognition and repair factor 298074 IBA,ISO
rno Recql4 RecQ like helicase 4 300057
rno Ercc5 ERCC excision repair 5, endonuclease 301382 ISO
rno Cul4b cullin 4B 302502 ISO
rno Ung uracil-DNA glycosylase 304577 ISO
rno Ercc4 ERCC excision repair 4, endonuclease catalytic subunit 304719 ISO
rno Neil2 nei-like DNA glycosylase 2 305957 IEA
rno Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit 308415 IBA
rno Blm BLM RecQ like helicase 308755
rno Dclre1b DNA cross-link repair 1B 310745 IBA
rno Xpc XPC complex subunit, DNA damage recognition and repair factor 312560 IBA,ISO
rno Smc6 structural maintenance of chromosomes 6 313961 IBA
rno Polh DNA polymerase eta 316235 IEA
rno Rev1 REV1, DNA directed polymerase 316344 IEA
rno Rad23a RAD23 homolog A, nucleotide excision repair protein 361381 IEA
rno Xrcc5 X-ray repair cross complementing 5 363247 IEA
rno Neil1 nei-like DNA glycosylase 1 367090 IEA
rno Brca1 BRCA1, DNA repair associated 497672 IEA,ISO
rno Msh3 mutS homolog 3 499505 ISO
rno Pot1 protection of telomeres 1 500054
rno H2ax H2A.X variant histone 500987 ISO
rno Kdm4d lysine demethylase 4D 689582 ISO
rno Aunip aurora kinase A and ninein interacting protein 689656 ISO,ISS
rno Msh6 mutS homolog 6 100360342 ISO
rno Ddb2 damage specific DNA binding protein 2 100362121 IBA,ISO
rno Xndc1 Xrcc1 N-terminal domain containing 1 102549471 IEA
gga PCNA proliferating cell nuclear antigen 373984 IEA
gga APTX aprataxin 395173
gga XPA XPA, DNA damage recognition and repair factor 395659 IEA
gga HMGB1 high mobility group box 1 395724 IEA
gga XRCC6 X-ray repair cross complementing 6 395767 IEA
gga NTHL1 nth like DNA glycosylase 1 416551 IEA
gga RPA1 replication protein A1 417563 IBA,ISS
gga REV1 REV1, DNA directed polymerase 418703 IEA
gga MSH6 mutS homolog 6 421291
gga DDB2 damage specific DNA binding protein 2 423185 IBA
gga DCLRE1A DNA cross-link repair 1A 423902 IBA
gga DCLRE1B DNA cross-link repair 1B 428269 IBA
gga DCLRE1C DNA cross-link repair 1C 430764 IBA
dre msh6 mutS homolog 6 (E. coli) 260437
dre rbbp8l retinoblastoma binding protein 8-like 324358 IBA
dre dclre1a DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae) 324964 IBA
dre ercc4 excision repair cross-complementation group 4 327322 IBA
dre rpa1 replication protein A1 327491 IBA,ISS
dre xrcc6 X-ray repair complementing defective repair in Chinese hamster cells 6 334488 IEA
dre rpa3 replication protein A3 393196 IBA
dre xpa xeroderma pigmentosum, complementation group A 393443 IBA,IEA
dre rad23b RAD23 homolog B, nucleotide excision repair protein 393536 IEA
dre ercc2 excision repair cross-complementation group 2 393900 IBA
dre cry-dash cryptochrome DASH 402986 IBA,IDA
dre aptx aprataxin 405797
dre msh2 mutS homolog 2 (E. coli) 406845
dre rad23aa RAD23 homolog A, nucleotide excision repair protein a 445284 IEA
dre xrcc1 X-ray repair complementing defective repair in Chinese hamster cells 1 445480 IEA
dre xrcc5 X-ray repair complementing defective repair in Chinese hamster cells 5 449848 IEA
dre neil3 nei-like DNA glycosylase 3 492463 IEA
dre rbbp8 retinoblastoma binding protein 8 503536 IBA
dre xpc xeroderma pigmentosum, complementation group C 541386 IBA,IEA
dre nbn nibrin 544655 IBA
dre zgc:110224 zgc:110224 550335 IEA
dre poli polymerase (DNA directed) iota 550532 IEA
dre si:dkey-119f1.1 si:dkey-119f1.1 557127 IBA
dre polk polymerase (DNA directed) kappa 562749 IEA
dre rad23ab RAD23 homolog A, nucleotide excision repair protein b 562839 IEA
dre dclre1c DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae) 566285 IBA
dre rev1 REV1 DNA directed polymerase 570043 IEA
dre polh polymerase (DNA directed), eta 678520 IEA
dre dclre1b DNA cross-link repair 1B 768137 IBA
dre ogg1 8-oxoguanine DNA glycosylase 791194 IEA
dre smc6 structural maintenance of chromosomes 6 797304 IBA
dre ercc1 excision repair cross-complementation group 1 100001425 IBA,IEA
dre ddb2 damage-specific DNA binding protein 2 100004133 IBA,IEA
dme Xpac Xeroderma pigmentosum group A-like 31357 IBA
dme mei-9 meiotic 9 31373 IBA
dme XRCC1 XRCC1 31451 IEA
dme Ogg1 8-oxoguanine DNA glycosylase 31806 IEA
dme RPA3 Replication protein A3 32113 IBA
dme spel1 spellchecker1 34842
dme Ku80 Ku80 34930 IEA
dme Ercc1 Ercc1 36654 IBA
dme Xpc Xeroderma pigmentosum, complementation group C 36697 IBA,ISS
dme Xpd Xeroderma pigmentosum D 37414 IBA
dme Rev1 Rev1 DNA directed polymerase 38079 IEA
dme Msh6 Msh6 39654
dme DNApol-eta DNA polymerase eta 40438 IEA
dme Snm1 Snm1 40669 IBA
dme DNApol-iota DNA polymerase iota 40965 IEA
dme RpA-70 Replication Protein A 70 40972 IBA
dme CG5316 uncharacterized protein 42322 ISS
dme RpS3 Ribosomal protein S3 42761 IDA
dme CG10694 uncharacterized protein 42855 IEA
dme jnj java no jive 42876 IBA,ISS
dme Rad23 Rad23 43785 IEA
dme nbs nbs 44259 IBA
dme Irbp Inverted repeat-binding protein 117419 IEA
dme SMC5 Structural maintenance of chromosomes 5 326215 ISS
cel msh-6 DNA mismatch repair protein 171914
cel msh-2 DNA_MISMATCH_REPAIR_2 domain-containing protein 171938
cel ubql-1 Ubiquilin 172434 IEA
cel mrt-1 MoRTal germline 172666 IBA
cel ercc-1 ERCC (DNA excision repair protein) homolog 172867 IBA,IEA
cel scc-1 Sister chromatid cohesion protein 1 173808 ISS
cel rpa-1 putative replication factor A 73 kDa subunit 174238 IBA
cel rev-1 DNA repair protein REV1 174275 IEA
cel smc-6 Structural maintenance of chromosomes protein 6 homolog smc-6 174776 IBA
cel rad-23 UV excision repair protein RAD23 174785 IEA
cel xpf-1 ERCC4 domain-containing protein 174793 IBA
cel xpd-1 General transcription and DNA repair factor IIH helicase subunit XPD 175190 IBA
cel polh-1 UmuC domain-containing protein 175337 IEA
cel cku-80 ATP-dependent DNA helicase II subunit 2;Ku_PK_bind domain-containing protein 175578 IEA
cel polk-1 DNA polymerase kappa 176209 IEA
cel com-1 uncharacterized protein 176518 IBA
cel cku-70 ATP-dependent DNA helicase 2 subunit 1 176546 IEA
cel mrt-2 Cell cycle checkpoint protein RAD1 homolog mrt-2 176608 ISS
cel xpc-1 XPC (Xeroderma Pigmentosum group C) DNA repair gene homolog 177002 IBA,IEA
cel rec-8 Meiotic recombination protein rec-8 178295 ISS
cel C23H4.6 AAA_23 domain-containing protein;Structural maintenance of chromosomes protein 6 181384 IBA
cel xpa-1 XPA_C domain-containing protein 187120 IBA,IEA
cel agt-1 6-O-methylguanine-DNA methyltransferase 190454 IDA
cfa RPS3 ribosomal protein S3 476804
sce SMC6 DNA repair protein SMC6 851099 IBA,IDA
sce RFA1 replication factor A subunit protein RFA1 851266 IBA
sce MSH6 mismatch repair ATPase MSH6 851671
sce RAD34 Rad34p 851909 IBA,IEA
sce RAD30 DNA-directed DNA polymerase eta 852028 IEA
sce LCD1 Lcd1p 852110 IDA
sce RAD16 DNA repair protein RAD16 852411 IDA
sce RAD7 UV-damaged DNA-binding protein RAD7 853512 IDA
sce IXR1 DNA-binding transcription repressor IXR1 853836 IDA
sce MSH2 mismatch repair ATPase MSH2 854063
sce SMC5 DNA repair ATPase SMC5 854123 IDA
sce HNT3 DNA 5'-adenosine monophosphate hydrolase 854432
sce REV1 deoxycytidyl transferase 854527 IEA
sce RAD17 Rad17p 854550 IEA
sce RAD10 DNA repair protein RAD10 854878 IBA,IEA
sce OGG1 8-oxoguanine glycosylase OGG1 854942 IEA
sce YKU80 ATP-dependent DNA helicase YKU80 855132 IEA
sce PSO2 DNA cross-link repair protein PSO2 855168 IBA,IMP
sce RAD14 DNA repair protein RAD14 855241 IBA,IDA,IEA
sce YKU70 ATP-dependent DNA helicase YKU70 855328 IEA
sce RAD1 ssDNA endodeoxyribonuclease RAD1 856085 IBA
sce RAD23 Rad23p 856674 IDA,IEA
sce MAG1 DNA-3-methyladenine glycosylase II 856885 IDA
sce RAD4 Rad4p 856909 IBA,IDA,IEA
sce RAD3 TFIIH/NER complex ATP-dependent 5'-3' DNA helicase subunit RAD3 856918 IBA,IDA
spo ctp1 CtIP family endonuclease 2538706 IBA
spo rad16 DNA repair endonuclease XPF 2538760 IBA
spo ssb3 DNA replication factor A subunit Ssb3 2538775 IBA
spo smc6 Smc5-6 complex SMC subunit Smc6 2539020 IBA
spo pku70 Ku domain protein Pku70 2539090 IEA
spo SPCC18.09c aprataxin-like protein 2539198
spo msh6 DNA mismatch repair protein 2539215
spo rhp42 DNA repair protein Rhp42 2539465 IBA,ISO
spo kpa1 DinB-like DNA repair polymerase kappa 2539547 IEA
spo eso1 sister chromatid cohesion protein/DNA polymerase eta Eso1 2539666 IEA
spo rev1 putative deoxycytidyl transferase Rev1 2539723 IEA
spo rhp23 UV excision repair protein rhp23 2540481 ISO
spo mag2 DNA-3-methyladenine glycosidase Mag2 2540646
spo msh2 DNA mismatch repair protein 2540695
spo swi10 DNA repair endonuclease Swi10 2540887 IBA,IEA
spo SPBC582.10c putative ATP-dependent DNA helicase Rhp16b 2540907 ISO
spo pku80 Ku domain protein Pku80 2541045 IEA
spo rhp14 DNA repair protein 2541120 IBA,ISO
spo ssb1 DNA replication factor A subunit Ssb1 2541158 IBA
spo pso2 putative DNA 5' exonuclease 2541503 IBA,ISO
spo fft3 putative protein Fft3 2541531 EXP
spo pol4 DNA polymerase X family 2541638
spo atl1 alkyltransferase-like protein Atl1 2541704 IDA
spo rad15 transcription factor TFIIH complex subunit Rad15 2542203 IBA
spo myh1 adenine DNA glycosylase Myh1 2542727
spo rhp41 DNA repair protein Rhp41 2542967 IBA,IEA
spo rad22 DNA recombination protein Rad22 2543086 TAS
spo mag1 DNA-3-methyladenine glycosylase Mag1 2543565 IDA
spo cmb1 cytosine-mismatch-binding protein 1 2543595 IDA
spo nbs1 Mre11 complex subunit Nbs1 3361306 IBA


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