GO:0000466 maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

24 hsa genes in this database.
24 mmu genes in this database.
23 rno genes in this database.
1 gga genes in this database.
21 dre genes in this database.
19 dme genes in this database.
21 cel genes in this database.
93 sce genes in this database.
43 spo genes in this database.

[QuickGO]

term: maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
goid: GO:0000466


Shaded genes do not have GeneChip data. The output was limited up to 100 for each of species.
Species Symbol Gene
coexpression
Locus
page
Full name* Entrez Gene ID Evidence*
hsa EXOSC9 exosome component 9 5393
hsa EXOSC10 exosome component 10 5394
hsa RPS21 ribosomal protein S21 6227
hsa NOP14 NOP14 nucleolar protein 8602
hsa URB1 URB1 ribosome biogenesis homolog 9875 IBA
hsa RCL1 RNA terminal phosphate cyclase like 1 10171
hsa RPP40 ribonuclease P/MRP subunit p40 10799
hsa EXOSC8 exosome component 8 11340
hsa EXOSC7 exosome component 7 23016
hsa RRS1 ribosome biogenesis regulator 1 homolog 23212
hsa BOP1 BOP1 ribosomal biogenesis factor 23246
hsa EXOSC2 exosome component 2 23404
hsa PES1 pescadillo ribosomal biogenesis factor 1 23481 IMP
hsa UTP20 UTP20 small subunit processome component 27340
hsa ABT1 activator of basal transcription 1 29777
hsa EXOSC3 exosome component 3 51010
hsa WDR12 WD repeat domain 12 55759 IBA,IMP
hsa KRI1 KRI1 homolog 65095
hsa ERI3 ERI1 exoribonuclease family member 3 79033
hsa NOL9 nucleolar protein 9 79707
hsa ERI1 exoribonuclease 1 90459
hsa ERI2 ERI1 exoribonuclease family member 2 112479
hsa FTSJ3 FtsJ RNA 2'-O-methyltransferase 3 117246 IBA
hsa NOP9 NOP9 nucleolar protein 161424
mmu Bop1 block of proliferation 1 12181
mmu Npm1 nucleophosmin 1 18148
mmu Abt1 activator of basal transcription 1 30946
mmu Exosc9 exosome component 9 50911
mmu Exosc10 exosome component 10 50912
mmu Ftsj3 FtsJ RNA methyltransferase homolog 3 (E. coli) 56095 IBA
mmu Wdr12 WD repeat domain 12 57750 IBA,ISO
mmu Rrs1 ribosome biogenesis regulator 1 59014
mmu Rcl1 RNA terminal phosphate cyclase-like 1 59028
mmu Pes1 pescadillo ribosomal biogenesis factor 1 64934 ISO
mmu Exosc3 exosome component 3 66362
mmu Exosc7 exosome component 7 66446
mmu Rps21 ribosomal protein S21 66481
mmu Eri1 exoribonuclease 1 67276
mmu Nop9 NOP9 nucleolar protein 67842
mmu Exosc8 exosome component 8 69639
mmu Eri2 exoribonuclease 2 71151
mmu Fcf1 FCF1 rRNA processing protein 73736
mmu Nol9 nucleolar protein 9 74035
mmu Eri3 exoribonuclease 3 140546
mmu Urb1 URB1 ribosome biogenesis 1 homolog (S. cerevisiae) 207932 IBA
mmu Rpp40 ribonuclease P 40 subunit 208366
mmu Kri1 KRI1 homolog 215194
mmu Exosc2 exosome component 2 227715
rno Npm1 nucleophosmin 1 25498
rno Rps21 ribosomal protein S21 81775
rno Pes1 pescadillo ribosomal biogenesis factor 1 289740 ISO,ISS
rno Nop9 NOP9 nucleolar protein 290235
rno Rpp40 ribonuclease P/MRP subunit p40 291071
rno Exosc9 exosome component 9 294975
rno Exosc8 exosome component 8 295050
rno Rrs1 ribosome biogenesis regulator 1 homolog 297784
rno Fcf1 FCF1 rRNA-processing protein 299198
rno Bop1 BOP1 ribosomal biogenesis factor 300050
rno Ftsj3 FtsJ RNA 2'-O-methyltransferase 3 303608 IBA
rno Urb1 URB1 ribosome biogenesis homolog 304104 IBA
rno Abt1 activator of basal transcription 1 306960
rno Rcl1 RNA terminal phosphate cyclase-like 1 309301
rno Exosc3 exosome component 3 313243
rno Eri3 ERI1 exoribonuclease family member 3 313535
rno Exosc10 exosome component 10 313707
rno Nol9 nucleolar protein 9 313744
rno Exosc7 exosome component 7 316098
rno Eri1 exoribonuclease 1 361159
rno Wdr12 WD repeat domain 12 363237 IBA,ISO,ISS
rno Exosc2 exosome component 2 366017
rno Eri2 ERI1 exoribonuclease family member 2 691484
gga FTSJ3 FtsJ homolog 3 419943 IBA
dre pes pescadillo 30228 ISS
dre ftsj3 FtsJ RNA 2'-O-methyltransferase 3 321247 IBA
dre wdr12 WD repeat domain 12 321652 IBA,ISS
dre gnl3 guanine nucleotide binding protein-like 3 (nucleolar) 321897
dre exosc8 exosome component 8 323016
dre rrs1 ribosome biogenesis regulator 1 homolog 337399
dre exosc10 exosome component 10 394064
dre rps21 ribosomal protein S21 394166
dre kri1 KRI1 homolog 402800
dre rpp40 ribonuclease P/MRP 40 subunit 415238
dre exosc9 exosome component 9 450057
dre exosc2 exosome component 2 550234
dre exosc7 exosome component 7 550247
dre abt1 activator of basal transcription 1 553568
dre eri1 exoribonuclease 1 553641
dre eri2 ERI1 exoribonuclease family member 2 553667
dre exosc3 exosome component 3 565000
dre nol9 nucleolar protein 9 567715
dre bop1 BOP1 ribosomal biogenesis factor 777627 IEA
dre gnl2 guanine nucleotide binding protein-like 2 (nucleolar) 793727
dre urb1 URB1 ribosome biogenesis homolog 100536352 IBA
dme CG6999 uncharacterized protein 31837
dme CG10993 uncharacterized protein 32344
dme CG8939 uncharacterized protein 32568 IBA
dme Rrp45 Rrp45 32665
dme RpS21 Ribosomal protein S21 33487
dme CG11123 uncharacterized protein 35664
dme Rrp42 Rrp42 36766
dme CG8414 uncharacterized protein 36774
dme Snp Snipper 37511
dme Rrp4 Rrp4 37731
dme CG5645 uncharacterized protein 39382
dme Rrp6 Rrp6 41798
dme CG12499 uncharacterized protein 42637 IBA
dme CG32409 uncharacterized protein 318016
dme CG32706 uncharacterized protein 318160
dme CG32708 uncharacterized protein 318161
dme Rrp40 Ribosomal RNA processing 40 319033
dme CG40813 uncharacterized protein 5740386
dme CG41562 uncharacterized protein 5740411
cel wdr-12 Ribosome biogenesis protein WDR12 homolog 172226 IEA
cel F57B10.8 Uncharacterized protein 172368
cel exos-8 Ribosomal RNA-processing protein 43 174111
cel F54C9.9 Protein KRI1 homolog 174374
cel Y48B6A.1 Ribosome biogenesis protein BOP1 homolog 175069 IEA
cel H06I04.3 Putative rRNA methyltransferase 175414 IBA
cel rps-21 40S ribosomal protein S21 176011
cel exos-9 Exosome complex component RRP45 176012
cel lpd-7 Pescadillo homolog 176072 IEA
cel R02D3.8 Exonuclease domain-containing protein 176845
cel eri-1 3'-5' exonuclease eri-1;Exonuclease domain-containing protein 176868
cel exos-2 Ribosomal RNA-processing protein 4 177403
cel ZK792.5 Uncharacterized protein 178103
cel T05H4.10 NopRA1 domain-containing protein 179023 IBA
cel rrbs-1 Ribosome biogenesis regulatory protein homolog 179942
cel exos-7 RNase_PH domain-containing protein 180369
cel crn-4 Cell death-related nuclease 4 180536
cel exos-3 Ribosomal RNA-processing protein 40 186604
cel nol-9 Polynucleotide 5'-hydroxyl-kinase nol-9 187190
cel M02B7.2 Exonuclease domain-containing protein 187397
cel crn-3 HRDC domain-containing protein 3565889
sce KRR1 ribosome biosynthesis protein KRR1 850298
sce SPB1 27S pre-rRNA (guanosine2922-2'-O)-methyltransferase 850304 IBA,IMP
sce RRP43 exosome non-catalytic core subunit RRP43 850401
sce BUD23 18S rRNA (guanine1575-N7)-methyltransferase 850414
sce PWP2 snoRNA-binding rRNA-processing protein PWP2 850422
sce LOC1 Loc1p 850551
sce GRC3 polynucleotide 5'-hydroxyl-kinase 850624
sce RPS0B ribosomal 40S subunit protein S0B 850737
sce FCF2 Fcf2p 850740
sce REX2 Rex2p 850748
sce REX3 RNA exonuclease 850797
sce DIP2 snoRNA-binding rRNA-processing protein DIP2 850820
sce RMP1 Rmp1p 850837 IBA,IMP
sce RPL37A ribosomal 60S subunit protein L37A 850882
sce EMG1 18S rRNA pseudouridine methyltransferase 850883
sce UTP13 Utp13p 850919
sce GSP1 Ran GTPase GSP1 851000
sce MAK16 ribosome biosynthesis protein MAK16 851208 IMP
sce SAS10 rRNA-processing protein SAS10 851403
sce NOP14 snoRNA-binding rRNA-processing protein NOP14 851407
sce RRP42 exosome non-catalytic core subunit RRP42 851447
sce DBP10 putative ATP-dependent RNA helicase DBP10 851530 IMP
sce RRP45 exosome non-catalytic core subunit RRP45 851874
sce FCF1 rRNA-processing protein FCF1 851939
sce UTP6 snoRNA-binding rRNA-processing protein UTP6 852060
sce RPS18A ribosomal 40S subunit protein S18A 852061
sce TOM1 E3 ubiquitin-protein ligase TOM1 852068
sce RPL37B ribosomal 60S subunit protein L37B 852111
sce UTP20 Utp20p 852282
sce MAK5 putative ATP-dependent RNA helicase 852439 IMP
sce ENP1 snoRNA-binding rRNA-processing protein ENP1 852549
sce RAI1 decapping nuclease 852646 IMP
sce ROK1 RNA-dependent ATPase ROK1 852704
sce PRP43 DEAH-box ATP-dependent RNA helicase PRP43 852757 IMP
sce DBP3 RNA-dependent ATPase DBP3 852802
sce RRP46 exosome non-catalytic core subunit RRP46 852987
sce NOP7 mRNA-binding ribosome synthesis protein NOP7 852995 IEA
sce MTR3 exosome non-catalytic core subunit MTR3 853062
sce SKI6 exosome non-catalytic core subunit SKI6 853109
sce RPS0A ribosomal 40S subunit protein S0A 853128
sce NOP19 Nop19p 853166
sce RNH70 Rnh70p 853193
sce RPL17B ribosomal 60S subunit protein L17B 853262
sce RPS21B ribosomal 40S subunit protein S21B 853305
sce UTP10 snoRNA-binding rRNA-processing protein UTP10 853335
sce UTP18 Utp18p 853376
sce MTR4 ATP-dependent RNA helicase MTR4 853397
sce NOP9 RNA-binding RNA processing protein NOP9 853445
sce MPP10 rRNA-processing protein MPP10 853458
sce RPL17A ribosomal 60S subunit protein L17A 853674
sce UTP11 rRNA-processing protein UTP11 853762
sce MAK11 Mak11p 853847 IMP
sce URB1 Urb1p 853855 IBA,IMP
sce RPS21A ribosomal 40S subunit protein S21A 853931
sce LAS1 rRNA-processing protein LAS1 853937
sce RPF2 rRNA-binding ribosome biosynthesis protein RPF2 853956 IMP
sce RRP40 exosome non-catalytic core subunit RRP40 854023
sce BRX1 ribosome biogenesis protein BRX1 854078
sce DIS3 exosome catalytic subunit DIS3 854138
sce RCL1 rRNA-processing endoribonuclease 854152
sce RRP6 exosome nuclease subunit RRP6 854162
sce UTP23 rRNA-binding ribosome biosynthesis protein UTP23 854165
sce RAT1 ssRNA exonuclease RAT1 854213
sce BUD21 Bud21p 854245
sce PNO1 Pno1p 854317
sce YTM1 Ytm1p 854446 IEA
sce RRS1 Rrs1p 854469
sce NOP58 RNA-processing protein NOP58 854487
sce UTP14 Utp14p 854881
sce RPS18B ribosomal 40S subunit protein S18B 854982
sce ERB1 Erb1p 855068 IEA
sce RRP5 Rrp5p 855269
sce KRI1 Kri1p 855408
sce CSL4 exosome non-catalytic core subunit CSL4 855489
sce RLP7 Rlp7p 855730
sce MPP6 Mpp6p 855758
sce DBP6 putative ATP-dependent RNA helicase DBP6 855774 IMP
sce ESF2 RNA-binding ATPase activator ESF2 855790
sce TIF6 translation initiation factor 6 856126 IMP
sce MRD1 RNA-binding ribosome biosynthesis protein MRD1 856228
sce RRP9 Rrp9p 856255
sce RRP15 Rrp15p 856264 IMP
sce NOC4 ribosome biosynthesis protein NOC4 856267
sce CIC1 Cic1p 856449 IMP
sce RRP4 exosome non-catalytic core subunit RRP4 856466
sce LRP1 Lrp1p 856481
sce RPF1 rRNA-binding ribosome biosynthesis protein RPF1 856488 IMP
sce DBP8 ATP-dependent RNA helicase DBP8 856574
sce UTP7 Utp7p 856815
sce NSA2 rRNA-processing protein NSA2 856863 IMP
sce LCP5 Lcp5p 856864
sce SNR17A 9164981
sce SNR17B 9164985
spo SPCC830.09c putative Rnase P/MRP subunit 2538895
spo SPCC16C4.05 putative Rnase P/MRP subunit 2538975
spo cti1 Cut3-interacting putative exosome subunit Cti1 2539105
spo SPCC757.08 putative exosome subunit Rrp45 2539106
spo SPCC14G10.02 putative ribosome biogenesis protein Urb1 2539162 IBA,ISO
spo SPCC830.03 putative polynucleotide kinase Grc3 2539329
spo csl4 putative exosome subunit Csl4 2539351
spo SPCC16C4.19 putative RNase MRP subunit 2539536
spo rrp46 putative exosome subunit Rrp46 2539660
spo SPBC13G1.09 putative bystin family U3 and U14 snoRNA associated protein 2539887
spo SPBC1703.01c putative Rnase P/MRP subunit 2539947
spo SPBC16C6.12c Las1-like protein 2540034
spo SPBC16G5.10 putative exosome subunit Rrp42 2540116
spo SPBC17D1.03c putative exosome subunit Rrp43 2540189
spo SPBC32H8.04c putative rRNA processing protein Fcf1 2540218
spo rrs1 putative ribosome biogenesis protein Rrs1 2540324
spo eri1 double-strand siRNA ribonuclease Eri1 2540347
spo dis3 putative 3'-5' exoribonuclease subunit Dis3 2540398
spo SPBC211.08c exosome complex component mtr3 2540412
spo esf2 putative U3 snoRNP-associated protein Esf2 2540503
spo ppp1 putative BRCT domain-containing ribosome biogenesis protein 2540659 IEA
spo rps21 40S ribosomal protein S21 2540806
spo rpl701 60S ribosomal protein L7 2540841
spo SPBC4F6.13c putative WD repeat/BOP1NT protein 2540888 IEA
spo pop7 putative Rnase P/MRP subunit Pop7 2541332
spo SPAC25B8.16 putative Rnase P/MRP subunit 2541548
spo SPAC22G7.05 putative krr family protein 2541654
spo SPAC2F7.14c putative exosome subunit Rrp4 2541813
spo SPAC22A12.12c putative exosome subunit Rrp40 2541837
spo nop9 putative RNA-binding protein Nop9 2542044
spo spb1 putative rRNA methyltransferase Spb1 2542112 IBA,ISO
spo rex3 putative exonuclease Rex3 2542165
spo dhp1 5'-3' exoribonuclease Dhp1 2542674
spo SPAC6C3.09 putative Rnase P subunit 2543013
spo SPAC3A12.04c putative RNase P and RNase MRP subunit p30 2543062
spo SPAC323.08 putative ribonuclease MRP complex subunit 2543088 IBA
spo rrp41 putative exosome 3'-5' phosphorolytic exoribonuclease Rrp41 2543451
spo SPAC4F8.04 putative Brix domain-containing protein Rpf1 2543503 ISO
spo SPAC637.09 putative ribonuclease H70 2543505
spo SPAC890.04c putative ribosome biogenesis protein Ytm1 2543549 IEA
spo rrp6 putative exosome 3'-5' exoribonuclease subunit Rrp6 2543630
spo pop8 putative RNase P and RNase MRP subunit Pop8 3361273
spo mrp1 5802869


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