GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

37 hsa genes in this database.
35 mmu genes in this database.
36 rno genes in this database.
3 gga genes in this database.
28 dre genes in this database.
33 dme genes in this database.
25 cel genes in this database.
108 sce genes in this database.
50 spo genes in this database.

[QuickGO]

term: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
goid: GO:0000462

Shaded genes do not have GeneChip data. The output was limited up to 100 for each of species.
Species Symbol Gene
coexpression		 Locus
page 		Full name* Entrez Gene ID Evidence*
hsa BYSL bystin like 705 IEA
hsa ERCC2 ERCC excision repair 2, TFIIH core complex helicase subunit 2068 IEA
hsa PWP2 PWP2 small subunit processome component 5822 IBA
hsa RPS8 ribosomal protein S8 6202 IBA
hsa RPS14 ribosomal protein S14 6208 IBA
hsa RPS16 ribosomal protein S16 6217 IBA
hsa RPS19 ribosomal protein S19 6223 IMP
hsa RPS21 ribosomal protein S21 6227
hsa NOP14 NOP14 nucleolar protein 8602 ISS
hsa WDR46 WD repeat domain 46 9277 IBA
hsa BMS1 BMS1 ribosome biogenesis factor 9790 IBA
hsa RCL1 RNA terminal phosphate cyclase like 1 10171
hsa TBL3 transducin beta like 3 10607
hsa RPP40 ribonuclease P/MRP subunit p40 10799
hsa RRS1 ribosome biogenesis regulator 1 homolog 23212
hsa DCAF13 DDB1 and CUL4 associated factor 13 25879 IBA
hsa NGDN neuroguidin 25983 IBA
hsa UTP25 UTP25 small subunit processor component 27042 IBA
hsa UTP20 UTP20 small subunit processome component 27340
hsa ABT1 activator of basal transcription 1 29777
hsa HEATR1 HEAT repeat containing 1 55127 IBA
hsa TSR1 TSR1 ribosome maturation factor 55720 IBA
hsa UTP6 UTP6 small subunit processome component 55813 IBA
hsa UTP3 UTP3 small subunit processome component 57050 IBA
hsa DHX37 DEAH-box helicase 37 57647 IBA
hsa MRPS11 mitochondrial ribosomal protein S11 64963 IBA
hsa KRI1 KRI1 homolog 65095
hsa NOL10 nucleolar protein 10 79954 IBA
hsa UTP23 UTP23 small subunit processome component 84294
hsa UTP4 UTP4 small subunit processome component 84916 IBA
hsa SLX9 SLX9 ribosome biogenesis factor 85395 IEA
hsa RRP36 ribosomal RNA processing 36 88745 IBA
hsa TSR2 TSR2 ribosome maturation factor 90121 IBA
hsa HELB DNA helicase B 92797 IBA
hsa NOP9 NOP9 nucleolar protein 161424
hsa GTF2H5 general transcription factor IIH subunit 5 404672 IEA
hsa LOC102724159 periodic tryptophan protein 2 homolog 102724159 IBA
mmu Ercc2 excision repair cross-complementing rodent repair deficiency, complementation group 2 13871 IMP
mmu Rps14 ribosomal protein S14 20044 IBA
mmu Rps16 ribosomal protein S16 20055 IBA
mmu Rps19 ribosomal protein S19 20085 ISO
mmu Rps8 ribosomal protein S8 20116 IBA
mmu Utp4 UTP4 small subunit processome component 21771 IBA
mmu Abt1 activator of basal transcription 1 30946
mmu Bysl bystin-like 53414 IMP
mmu Wdr46 WD repeat domain 46 57315 IBA
mmu Rrs1 ribosome biogenesis regulator 1 59014
mmu Rcl1 RNA terminal phosphate cyclase-like 1 59028
mmu Utp3 UTP3 small subunit processome component 65961 IBA
mmu Gtf2h5 general transcription factor IIH, polypeptide 5 66467 IMP
mmu Rps21 ribosomal protein S21 66481
mmu Nop9 NOP9 nucleolar protein 67842
mmu Mrps11 mitochondrial ribosomal protein S11 67994 IBA
mmu Ngdn neuroguidin, EIF4E binding protein 68966 IBA
mmu Tsr2 TSR2 20S rRNA accumulation 69499 IBA
mmu Fcf1 FCF1 rRNA processing protein 73736
mmu Utp23 UTP23 small subunit processome component 78581
mmu Tsr1 TSR1 20S rRNA accumulation 104662 IBA
mmu Fam207a family with sequence similarity 207, member A 108707 IEA
mmu Pwp2 PWP2 periodic tryptophan protein homolog (yeast) 110816 IBA
mmu Helb helicase (DNA) B 117599 IBA
mmu Dhx37 DEAH (Asp-Glu-Ala-His) box polypeptide 37 208144 IBA
mmu Rpp40 ribonuclease P 40 subunit 208366
mmu Tbl3 transducin (beta)-like 3 213773
mmu Bms1 BMS1, ribosome biogenesis factor 213895 IBA
mmu Utp25 UTP25 small subunit processome component 215193 IBA
mmu Kri1 KRI1 homolog 215194
mmu Utp6 UTP6 small subunit processome component 216987 IBA
mmu Nol10 nucleolar protein 10 217431 IBA
mmu Heatr1 HEAT repeat containing 1 217995 IBA
mmu Dcaf13 DDB1 and CUL4 associated factor 13 223499 IBA
mmu Rrp36 ribosomal RNA processing 36 224823 IBA
rno Rps14 ribosomal protein S14 29284 IBA
rno Rps8 ribosomal protein S8 65136 IBA
rno Rps21 ribosomal protein S21 81775
rno Rps16 ribosomal protein S16 140655 IBA
rno Tbl3 transducin (beta)-like 3 287120
rno Dhx37 DEAH-box helicase 37 288647 IBA
rno Nop9 NOP9 nucleolar protein 290235
rno Rpp40 ribonuclease P/MRP subunit p40 291071
rno Utp4 UTP4 small subunit processome component 291987 IBA
rno Slx9 SLX9 ribosome biogenesis factor 294333 IEA
rno LOC297756 ribosomal protein S8-like 297756 IBA
rno Rrs1 ribosome biogenesis regulator 1 homolog 297784
rno Fcf1 FCF1 rRNA-processing protein 299198
rno Utp23 UTP23, small subunit processome component 299900
rno Utp25 UTP25, small subunit processor component 305076 IBA
rno Utp3 UTP3, small subunit processome component 305258 IBA
rno Ngdn neuroguidin 305887 IBA
rno Abt1 activator of basal transcription 1 306960
rno Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit 308415 ISO
rno Rcl1 RNA terminal phosphate cyclase-like 1 309301
rno Wdr46 WD repeat domain 46 309628 IBA
rno Nol10 nucleolar protein 10 313981 IBA
rno Tsr2 TSR2, ribosome maturation factor 317418 IBA
rno Bysl bystin-like 359727 IEA,ISO
rno Utp6 UTP6 small subunit processome component 360574 IBA
rno Heatr1 HEAT repeat containing 1 361262 IBA
rno Bms1 BMS1 ribosome biogenesis factor 362426 IBA
rno Dcaf13 DDB1 and CUL4 associated factor 13 362902 IBA
rno Mrps11 mitochondrial ribosomal protein S11 499185 IBA
rno Helb DNA helicase B 500837 IBA
rno Gtf2h5 general transcription factor IIH subunit 5 502227 ISO
rno Pwp2 PWP2, small subunit processome component 690297 IBA
rno Tsr1 TSR1, ribosome maturation factor 100360406 IBA
rno Rrp36 ribosomal RNA processing 36 100360664 IBA
rno LOC100363452 ribosomal protein S8-like 100363452 IBA
rno LOC100911847 40S ribosomal protein S14-like 100911847 IBA
gga DCAF13 DDB1 and CUL4 associated factor 13 420263 IBA
gga DIEXF digestive organ expansion factor homolog (zebrafish) 421384 IBA
gga GTF2H5 general transcription factor IIH subunit 5 769754 IEA
dre pwp2h PWP2 small subunit processome component 266990 IBA
dre utp25 UTP25 small subunit processor component 286787 IBA,IMP
dre tsr2 TSR2 ribosome maturation factor 317639 IBA
dre rrp36 ribosomal RNA processing 36 321183 IBA
dre tsr1 TSR1 ribosome maturation factor 325037 IBA
dre heatr1 HEAT repeat containing 1 334446 IBA,IMP
dre rps14 ribosomal protein S14 336687 IBA
dre rrs1 ribosome biogenesis regulator 1 homolog 337399
dre ngdn neuroguidin, EIF4E binding protein 386642 IBA
dre dcaf13 ddb1 and cul4 associated factor 13 393097 IBA
dre utp6 UTP6 small subunit processome component 393107 IBA,IEA
dre nol10 nucleolar protein 10 393206 IBA
dre wdr46 WD repeat domain 46 393596 IBA
dre rps21 ribosomal protein S21 394166
dre kri1 KRI1 homolog 402800
dre utp4 UTP4 small subunit processome component 406571 IBA
dre rps8a ribosomal protein S8a 407690 IBA
dre rpp40 ribonuclease P/MRP 40 subunit 415238
dre utp3 UTP3 small subunit processome component 447856 IBA
dre tbl3 transducin beta like 3 492761
dre bms1 BMS1 ribosome biogenesis factor 553241 IBA
dre abt1 activator of basal transcription 1 553568
dre mrps11 mitochondrial ribosomal protein S11 556272 IBA
dre rps16 ribosomal protein S16 767765 IBA
dre slx9 SLX9 ribosome biogenesis factor 797099 IEA
dre helb helicase (DNA) B 797342 IBA
dre rps8b ribosomal protein S8b 100000836 IBA
dre dhx37 DEAH (Asp-Glu-Ala-His) box polypeptide 37 100009635 IBA
dme kz kurz 31205 IBA
dme CG3071 uncharacterized protein 31213 ISS
dme Sas10 Something about silencing 10 31447 IBA
dme CG2260 uncharacterized protein 31732 IBA
dme CG7246 uncharacterized protein 31833 IBA
dme CG6999 uncharacterized protein 31837
dme CG10993 uncharacterized protein 32344
dme RpS21 Ribosomal protein S21 33487
dme CG11030 uncharacterized protein 33805 IBA
dme l(2)k09022 lethal (2) k09022 33960 IBA
dme l(2)34Fd lethal (2) 34Fd 34839 IBA
dme CG11123 uncharacterized protein 35664
dme CG1671 uncharacterized protein 36019
dme CG12325 uncharacterized protein 36144 IBA
dme RpS16 Ribosomal protein S16 37580 IBA
dme CG3735 uncharacterized protein 37803 IBA
dme CG16753 uncharacterized protein 38365 IEA
dme CG5645 uncharacterized protein 39382
dme CG7275 uncharacterized protein 39669 IBA
dme l(3)72Dn lethal (3) 72Dn 39774 IBA
dme CG7728 uncharacterized protein 39904 IBA
dme Tsr1 Tsr1 ribosome assembly factor 40360 IBA
dme CG8461 uncharacterized protein 41758 IBA
dme mRpS11 mitochondrial ribosomal protein S11 42061 IBA
dme CG14543 uncharacterized protein 43167 IBA
dme RpS8 Ribosomal protein S8 43532 IBA
dme RpS14a Ribosomal protein S14a 47218 IBA
dme RpS14b Ribosomal protein S14b 47219 IBA
dme CG32409 uncharacterized protein 318016
dme CG32706 uncharacterized protein 318160
dme CG32708 uncharacterized protein 318161
dme CG40813 uncharacterized protein 5740386
dme CG41562 uncharacterized protein 5740411
cel F55F8.3 Periodic tryptophan protein 2 homolog 172224 IBA
cel lpd-2 LiPid Depleted 172320 IBA
cel F57B10.8 Uncharacterized protein 172368
cel K05C4.5 Uncharacterized protein 173339 IBA
cel ZK430.7 DDB1-and CUL4-associated factor 13 173778 IBA
cel toe-1 HEAT repeat-containing protein 1 homolog 173779 IBA
cel tag-151 Pre-rRNA-processing protein TSR1 homolog 173812 IBA
cel F54C9.9 Protein KRI1 homolog 174374
cel T01B7.5 Sas10 domain-containing protein 174395 IBA
cel rps-14 40S ribosomal protein S14 176006 IBA
cel rps-21 40S ribosomal protein S21 176011
cel rha-2 Putative ATP-dependent RNA helicase rha-2 176207 IBA
cel Y41C4A.9 Uncharacterized protein 176604 IBA
cel rps-8 40S ribosomal protein S8 177503 IBA
cel nol-10 NUC153 domain-containing protein 177538 IBA
cel ZK792.5 Uncharacterized protein 178103
cel wdr-46 WD_REPEATS_REGION domain-containing protein 178185 IBA
cel Y51H4A.15 Pre-rRNA-processing protein TSR2 homolog 178464 IBA
cel Y61A9LA.10 Bms1-type G domain-containing protein 178851 IBA
cel mrps-11 Mitochondrial Ribosomal Protein, Small 179711 IBA
cel rrbs-1 Ribosome biogenesis regulatory protein homolog 179942
cel rps-16 40S ribosomal protein S16 179998 IBA
cel Y53C12B.1 WD_REPEATS_REGION domain-containing protein 190203
cel C10B5.1 WD_REPEATS_REGION domain-containing protein 266915
cel T22H9.1 Uncharacterized protein 24104925 IBA
sce KRR1 ribosome biosynthesis protein KRR1 850298
sce RPS14A ribosomal 40S subunit protein S14A 850397 IBA,IGI,IMP
sce BUD23 18S rRNA (guanine1575-N7)-methyltransferase 850414
sce PWP2 snoRNA-binding rRNA-processing protein PWP2 850422 IBA,IMP
sce CDC4 SCF ubiquitin ligase complex subunit CDC4 850539
sce LOC1 Loc1p 850551
sce SOF1 rRNA-processing protein SOF1 850649 IBA,IMP
sce RPS0B ribosomal 40S subunit protein S0B 850737
sce FCF2 Fcf2p 850740
sce FYV7 Fyv7p 850757 IMP
sce DIP2 snoRNA-binding rRNA-processing protein DIP2 850820 IMP
sce EMG1 18S rRNA pseudouridine methyltransferase 850883
sce HCR1 translation initiation factor eIF3 core subunit j 850889 IMP
sce UTP13 Utp13p 850919 IMP
sce TSR2 Tsr2p 851154 IBA,IMP
sce RPS1A ribosomal 40S subunit protein S1A 851162 IGI
sce FUN12 translation initiation factor eIF5B 851196 IMP
sce FAP7 nucleoside-triphosphatase 851388 IMP
sce SAS10 rRNA-processing protein SAS10 851403 IBA,IMP
sce NOP14 snoRNA-binding rRNA-processing protein NOP14 851407 IMP
sce RPS16B ribosomal 40S subunit protein S16B 851476 IBA,IGI
sce TSR1 Tsr1p 851499 IBA,IMP
sce FAL1 ATP-dependent RNA helicase FAL1 851584 IMP
sce RPS11A ribosomal 40S subunit protein S11A 851589 IGI
sce RPS13 ribosomal 40S subunit protein S13 851636 IMP
sce BFR2 rRNA-processing protein BFR2 851893 IBA,IMP
sce UTP4 Utp4p 851924 IBA,IMP
sce FCF1 rRNA-processing protein FCF1 851939
sce UTP5 Utp5p 852007 IMP
sce UTP6 snoRNA-binding rRNA-processing protein UTP6 852060 IBA,IEA,IMP
sce RPS18A ribosomal 40S subunit protein S18A 852061
sce TOM1 E3 ubiquitin-protein ligase TOM1 852068
sce RPS8A ribosomal 40S subunit protein S8A 852206 IBA,IGI
sce UTP20 Utp20p 852282
sce RPS11B ribosomal 40S subunit protein S11B 852337 IGI
sce RPS6B ribosomal 40S subunit protein S6B 852479 IGI
sce RPS9B ribosomal 40S subunit protein S9B 852487 IGI
sce ENP1 snoRNA-binding rRNA-processing protein ENP1 852549
sce ROK1 RNA-dependent ATPase ROK1 852704
sce PRP43 DEAH-box ATP-dependent RNA helicase PRP43 852757 IMP
sce SLX9 Slx9p 852972 IEA,IGI,IMP
sce UTP22 rRNA-processing protein UTP22 852982 IC
sce NOP7 mRNA-binding ribosome synthesis protein NOP7 852995 IMP
sce RPS23A ribosomal 40S subunit protein S23A 853015 IGI
sce UTP8 Utp8p 853029 IMP
sce ENP2 ribosome biosynthesis protein ENP2 853048 IBA,IMP
sce RPS0A ribosomal 40S subunit protein S0A 853128
sce NOP19 Nop19p 853166 IMP
sce EFG1 Efg1p 853188 IBA,IMP
sce RPS14B ribosomal 40S subunit protein S14B 853248 IBA,IGI,IMP
sce RPS21B ribosomal 40S subunit protein S21B 853305
sce UTP10 snoRNA-binding rRNA-processing protein UTP10 853335 IBA,IMP
sce UTP18 Utp18p 853376
sce NOP9 RNA-binding RNA processing protein NOP9 853445
sce MPP10 rRNA-processing protein MPP10 853458
sce RPS27A ribosomal 40S subunit protein S27A 853700 IGI
sce UTP11 rRNA-processing protein UTP11 853762
sce DHR2 RNA helicase 853784 IMP
sce RPS21A ribosomal 40S subunit protein S21A 853931
sce UTP30 Utp30p 853934 IGI
sce RCL1 rRNA-processing endoribonuclease 854152
sce UTP23 rRNA-binding ribosome biosynthesis protein UTP23 854165 IMP
sce NOB1 rRNA-binding endoribonuclease 854221 IMP
sce BUD21 Bud21p 854245 IMP
sce RIO1 protein kinase RIO1 854286 IDA
sce PNO1 Pno1p 854317
sce RRP36 rRNA-processing protein RRP36 854461 IBA,IMP
sce RRS1 Rrs1p 854469
sce NOP58 RNA-processing protein NOP58 854487
sce UTP25 rRNA-binding ribosome biosynthesis protein UTP25 854717 IBA,IMP
sce RPS24B ribosomal 40S subunit protein S24B 854741 IGI
sce FAF1 Faf1p 854793 IBA,IMP
sce UTP14 Utp14p 854881
sce RPS1B ribosomal 40S subunit protein S1B 854939 IGI
sce RPS18B ribosomal 40S subunit protein S18B 854982
sce UTP15 snoRNA-binding rRNA-processing protein UTP15 855118 IMP
sce ECM16 ATP-dependent RNA helicase ECM16 855158 IBA,IMP
sce RPS16A ribosomal 40S subunit protein S16A 855174 IBA,IGI
sce RRP5 Rrp5p 855269
sce HAS1 ATP-dependent RNA helicase HAS1 855335 IMP
sce KRI1 Kri1p 855408
sce MRPS18 mitochondrial 37S ribosomal protein YmS18 855410 IBA
sce RIO2 protein kinase RIO2 855514 IMP,ISS
sce ESF2 RNA-binding ATPase activator ESF2 855790
sce DIM1 putative dimethyladenosine transferase 855862 IMP
sce BMS1 GTPase BMS1 855884 IBA
sce NAN1 Nan1p 855977 IMP
sce RPS6A ribosomal 40S subunit protein S6A 856015 IGI
sce RPS9A ribosomal 40S subunit protein S9A 856024 IGI
sce RRP12 mRNA-binding protein RRP12 856095 IMP,TAS
sce MRD1 RNA-binding ribosome biosynthesis protein MRD1 856228
sce RPS23B ribosomal 40S subunit protein S23B 856250 IGI
sce RRP9 Rrp9p 856255
sce NOC4 ribosome biosynthesis protein NOC4 856267
sce RPS20 ribosomal 40S subunit protein S20 856371 IMP
sce RPS27B ribosomal 40S subunit protein S27B 856415 IGI
sce RRP3 RNA-dependent ATPase RRP3 856462 IMP
sce DBP8 ATP-dependent RNA helicase DBP8 856574
sce UTP9 Utp9p 856603 IMP
sce SNU13 RNA binding protein SNU13 856687 IMP
spo SPCC830.11c putative nucleoside-triphosphatase 2538752 ISO
spo SPCC830.09c putative Rnase P/MRP subunit 2538895
spo SPCC1827.01c putative U3 associated protein Utp25 2538900 IBA
spo SPCC16C4.05 putative Rnase P/MRP subunit 2538975
spo SPCC330.09 putative rRNA processing protein Enp2 2538997 IBA
spo utp13 putative U3 snoRNP-associated protein Utp13 2539337
spo SPCC16C4.19 putative RNase MRP subunit 2539536
spo SPBC13G1.09 putative bystin family U3 and U14 snoRNA associated protein 2539887
spo SPBC1703.01c putative Rnase P/MRP subunit 2539947
spo SPBC32H8.04c putative rRNA processing protein Fcf1 2540218
spo SPBC336.02 putative SSU rRNA dimethylase 2540247 ISO
spo utp10 putative U3 snoRNP-associated protein Utp10 2540284 IBA
spo rrs1 putative ribosome biogenesis protein Rrs1 2540324
spo bms1 putative GTP-binding protein Bms1 2540390 IBA
spo esf2 putative U3 snoRNP-associated protein Esf2 2540503
spo utp4 putative U3 snoRNP protein Utp4 2540514 IBA
spo SPBC244.02c putative U3 snoRNP-associated protein Utp6 2540651 IBA,ISO
spo SPBC1A4.07c putative U3 snoRNP-associated protein Sof1 2540796 IBA
spo rps21 40S ribosomal protein S21 2540806
spo rps1601 40S ribosomal protein S16 2540812 IBA
spo SPBC409.15 putative rRNA processing protein Tsr2 2540813 IBA
spo rps1401 40S ribosomal protein S14 2540817 IBA
spo rpl701 60S ribosomal protein L7 2540841
spo SPBC3B8.09 putative U3 snoRNP-associated protein Utp3 2541000 IBA
spo SPBC713.04c putative U3 snoRNP-associated protein Utp1 2541182 IBA
spo pop7 putative Rnase P/MRP subunit Pop7 2541332
spo SPAC1565.05 hypothetical protein 2541440 ISO
spo rps801 40S ribosomal protein S8 2541491 IBA
spo SPAC25B8.16 putative Rnase P/MRP subunit 2541548
spo SPAC22G7.05 putative krr family protein 2541654
spo SPAC23H4.15 putative ribosome biogenesis protein Tsr1 2541779 IBA
spo nop9 putative RNA-binding protein Nop9 2542044
spo SPAC18B11.06 putative U3 snoRNP-associated protein Lcp5 2542587 IBA
spo mrps18 putative mitochondrial ribosomal protein subunit S18 2542616 IBA
spo SPAC10F6.10 putative RIO family protein kinase 2542923 ISO
spo SPAC6C3.09 putative Rnase P subunit 2543013
spo SPAC3A12.04c putative RNase P and RNase MRP subunit p30 2543062
spo SPAC323.08 putative ribonuclease MRP complex subunit 2543088
spo SPAC12G12.02 rRNA-processing protein 2543142 IBA
spo SPAC3F10.08c putative rRNA processing protein Faf1 2543196 IBA
spo rps802 40S ribosomal protein S8 2543354 IBA
spo SPAPB1A10.06c putative ATP-dependent RNA helicase Dhr1 2543371 IBA
spo SPAC823.04 hypothetical protein 2543403 IBA,ISO
spo SPAPB21F2.03 putative ribosome biogenesis protein 2543463 IEA
spo SPAC959.03c putative U3 snoRNP-associated protein Utp7 2543484 IBA
spo SPAC664.08c putative traub family ribosome biogenesis protein 2543540 IBA
spo rps1602 40S ribosomal protein S16 2543559 IBA
spo pop8 putative RNase P and RNase MRP subunit Pop8 3361273
spo rps1402 40S ribosomal protein S14 5802781 IBA
spo mrp1 5802869


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