GO:0000154 rRNA modification

40 hsa genes in this database.
31 mmu genes in this database.
30 rno genes in this database.
4 gga genes in this database.
26 dre genes in this database.
28 dme genes in this database.
21 cel genes in this database.
94 sce genes in this database.
23 spo genes in this database.

[QuickGO]

term: rRNA modification
goid: GO:0000154

Shaded genes do not have GeneChip data. The output was limited up to 100 for each of species.
Species Symbol Gene
coexpression		 Locus
page 		Full name* Entrez Gene ID Evidence*
hsa DKC1 dyskerin pseudouridine synthase 1 1736
hsa FBL fibrillarin 2091
hsa NOP2 NOP2 nucleolar protein 4839
hsa EMG1 EMG1 N1-specific pseudouridine methyltransferase 10436
hsa RPUSD2 RNA pseudouridine synthase domain containing 2 27079
hsa DIMT1 DIM1 rRNA methyltransferase and ribosome maturation factor 27292
hsa ZCCHC4 zinc finger CCHC-type containing 4 29063
hsa METTL5 methyltransferase 5, N6-adenosine 29081
hsa MRM2 mitochondrial rRNA methyltransferase 2 29960
hsa METTL25B methyltransferase like 25B 51093
hsa TFB1M transcription factor B1, mitochondrial 51106 TAS
hsa TRMT112 tRNA methyltransferase activator subunit 11-2 51504
hsa GAR1 GAR1 ribonucleoprotein 54433
hsa TRMT61B tRNA methyltransferase 61B 55006
hsa MRM3 mitochondrial rRNA methyltransferase 3 55178
hsa NAT10 N-acetyltransferase 10 55226 TAS
hsa NOP10 NOP10 ribonucleoprotein 55505
hsa THUMPD1 THUMP domain containing 1 55623 TAS
hsa NHP2 NHP2 ribonucleoprotein 55651
hsa NSUN5 NOP2/Sun RNA methyltransferase 5 55695
hsa NSUN3 NOP2/Sun RNA methyltransferase 3 63899
hsa TFB2M transcription factor B2, mitochondrial 64216
hsa METTL16 methyltransferase 16, N6-methyladenosine 79066
hsa MRM1 mitochondrial rRNA methyltransferase 1 79922
hsa RPUSD4 RNA pseudouridine synthase D4 84881
hsa FDXACB1 ferredoxin-fold anticodon binding domain containing 1 91893
hsa NAF1 nuclear assembly factor 1 ribonucleoprotein 92345
hsa RPUSD1 RNA pseudouridine synthase domain containing 1 113000
hsa BUD23 BUD23 rRNA methyltransferase and ribosome maturation factor 114049
hsa TSR3 TSR3 ribosome maturation factor 115939 TAS
hsa FTSJ3 FtsJ RNA 2'-O-methyltransferase 3 117246
hsa MTERF4 mitochondrial transcription termination factor 4 130916
hsa BMT2 base methyltransferase of 25S rRNA 2 homolog 154743
hsa NSUN5P1 NSUN5 pseudogene 1 155400
hsa METTL15 methyltransferase like 15 196074
hsa NSUN5P2 NSUN5 pseudogene 2 260294
hsa RPUSD3 RNA pseudouridine synthase D3 285367
hsa FBLL1 fibrillarin like 1 345630
hsa NSUN4 NOP2/Sun RNA methyltransferase 4 387338
hsa METTL15P1 methyltransferase like 15 pseudogene 1 100130758
mmu Fbl fibrillarin 14113
mmu Emg1 EMG1 N1-specific pseudouridine methyltransferase 14791
mmu Tfb2m transcription factor B2, mitochondrial 15278 IEA
mmu Nhp2 NHP2 ribonucleoprotein 52530
mmu Ftsj3 FtsJ RNA methyltransferase homolog 3 (E. coli) 56095
mmu Bud23 BUD23, rRNA methyltransferase and ribosome maturation factor 66138
mmu Nop10 NOP10 ribonucleoprotein 66181
mmu Dimt1 DIM1 dimethyladenosine transferase 1-like (S. cerevisiae) 66254 IEA
mmu Mrm3 mitochondrial rRNA methyltransferase 3 67390
mmu Mettl16 methyltransferase like 16 67493
mmu Trmt112 tRNA methyltransferase 11-2 67674
mmu Mrm2 mitochondrial rRNA methyltransferase 2 68017
mmu Gar1 GAR1 ribonucleoprotein 68147
mmu Tsr3 TSR3 20S rRNA accumulation 68327
mmu Rpusd4 RNA pseudouridylate synthase domain containing 4 71989
mmu Nsun4 NOL1/NOP2/Sun domain family, member 4 72181
mmu Mettl5 methyltransferase like 5 75422
mmu Mettl15 methyltransferase like 15 76894
mmu Zcchc4 zinc finger, CCHC domain containing 4 78796
mmu Nat10 N-acetyltransferase 10 98956
mmu Nsun5 NOL1/NOP2/Sun domain family, member 5 100609
mmu Rpusd3 RNA pseudouridylate synthase domain containing 3 101122
mmu Nsun3 NOL1/NOP2/Sun domain family member 3 106338
mmu Rpusd1 RNA pseudouridylate synthase domain containing 1 106707
mmu Nop2 NOP2 nucleolar protein 110109
mmu Tfb1m transcription factor B1, mitochondrial 224481 IEA
mmu Naf1 nuclear assembly factor 1 ribonucleoprotein 234344
mmu Fbll1 fibrillarin-like 1 237730
mmu Dkc1 dyskeratosis congenita 1, dyskerin 245474
mmu Rpusd2 RNA pseudouridylate synthase domain containing 2 271842
mmu Fdxacb1 ferredoxin-fold anticodon binding domain containing 1 382137
rno Dkc1 dyskerin pseudouridine synthase 1 170944
rno Rpusd1 RNA pseudouridine synthase domain containing 1 287148
rno Nhp2 NHP2 ribonucleoprotein 287273
rno Nsun5 NOP2/Sun RNA methyltransferase 5 288595
rno Tfb2m transcription factor B2, mitochondrial 289307
rno Fbl fibrillarin 292747
rno Trmt112 tRNA methyltransferase activator subunit 11-2 293700
rno Dimt1 DIM1 rRNA methyltransferase and ribosome maturation factor 294718
rno Mettl15 methyltransferase like 15 295985
rno Nsun4 NOP2/Sun RNA methyltransferase 4 298426
rno Ftsj3 FtsJ RNA 2'-O-methyltransferase 3 303608
rno Mrm2 mitochondrial rRNA methyltransferase 2 304323
rno Tfb1m transcription factor B1, mitochondrial 308140
rno Nat10 N-acetyltransferase 10 311257
rno Rpusd2 RNA pseudouridine synthase domain containing 2 311326
rno Emg1 EMG1 N1-specific pseudouridine methyltransferase 312706
rno Nop2 NOP2 nucleolar protein 314969
rno Rpusd4 RNA pseudouridine synthase D4 315550
rno Fdxacb1 ferredoxin-fold anticodon binding domain containing 1 315646
rno Tsr3 TSR3 ribosome maturation factor 360494
rno Mrm3 mitochondrial rRNA methyltransferase 3 360569
rno Zcchc4 zinc finger CCHC-type containing 4 360946
rno Rpusd3 RNA pseudouridine synthase D3 362416
rno Fbll1 fibrillarin-like 1 363563
rno Mrm1 mitochondrial rRNA methyltransferase 1 363661
rno Bud23 BUD23, rRNA methyltransferase and ribosome maturation factor 368084
rno Gar1 GAR1 ribonucleoprotein 499709
rno Bmt2 base methyltransferase of 25S rRNA 2 homolog 500034
rno Mettl5 methyltransferase like 5 502632
rno Nop10 NOP10 ribonucleoprotein 691534
gga BMT2 base methyltransferase of 25S rRNA 2 homolog 417776
gga FTSJ3 FtsJ homolog 3 419943
gga DKC1 dyskerin pseudouridine synthase 1 422196
gga METTL16 methyltransferase like 16 431184
dre nop2 NOP2 nucleolar protein homolog (yeast) 321130
dre ftsj3 FtsJ RNA 2'-O-methyltransferase 3 321247
dre nat10 N-acetyltransferase 10 393617
dre gar1 GAR1 homolog, ribonucleoprotein 393950
dre fbl fibrillarin 406275
dre nsun5 NOP2/Sun RNA methyltransferase 5 406690
dre tsr3 TSR3 ribosome maturation factor 436643
dre rpusd4 RNA pseudouridine synthase D4 445101
dre dimt1l DIM1 dimethyladenosine transferase 1-like (S. cerevisiae) 445162 IEA
dre mettl16 methyltransferase 16, N6-methyladenosin 445217
dre nop10 NOP10 ribonucleoprotein homolog (yeast) 445391
dre mettl5 methyltransferase 5, N6-adenosine 449776
dre nsun4 NOP2/Sun RNA methyltransferase 4 494106
dre nsun3 NOP2/Sun RNA methyltransferase 3 553534
dre trmt112 tRNA methyltransferase activator subunit 11-2 553790
dre zcchc4 zinc finger, CCHC domain containing 4 564410
dre rpusd2 RNA pseudouridine synthase domain containing 2 565088
dre fdxacb1 ferredoxin-fold anticodon binding domain containing 1 566022
dre tfb2m transcription factor B2, mitochondrial 569468 IEA
dre bud23 BUD23 rRNA methyltransferase and ribosome maturation factor 572367
dre dkc1 dyskeratosis congenita 1, dyskerin 613144
dre emg1 EMG1 N1-specific pseudouridine methyltransferase 678588
dre rpusd1 RNA pseudouridine synthase domain containing 1 767786
dre tfb1m transcription factor B1, mitochondrial 767802 IEA
dre mettl25b methyltransferase like 25B 791981 IEA
dre nhp2 NHP2 ribonucleoprotein homolog (yeast) 100003787
dme CG3527 uncharacterized protein 31387
dme l(1)G0020 lethal (1) G0020 31811
dme CG8939 uncharacterized protein 32568
dme l(2)10685 lethal (2) 10685 33293
dme RluA-1 RluA pseudouridine synthase 1 34438
dme RluA-2 RluA pseudouridine synthase 2 34440
dme CG7637 uncharacterized protein 36135
dme CG8545 uncharacterized protein 36365
dme CG12863 uncharacterized protein 36623
dme CG7544 uncharacterized protein 36680
dme CG4038 uncharacterized protein 37397
dme Fib Fibrillarin 37662
dme Nop60B Nucleolar protein at 60B 37873
dme CG9666 uncharacterized protein 40096
dme CG12975 uncharacterized protein 40343
dme Nopp140 Nopp140 40433
dme CG10903 uncharacterized protein 40952
dme mtTFB2 mitochondrial transcription factor B2 41228
dme CG14683 uncharacterized protein 41278
dme CG10909 uncharacterized protein 41581
dme CG11837 uncharacterized protein 43429
dme NHP2 NHP2 44005
dme snoRNA:Me28S-G1083a 5740470
dme snoRNA:Me28S-G1083c 5740517
dme snoRNA:Me28S-G1083b 5740645
dme snoRNA:Me28S-G1083d 5740779
dme Nsun5 Nop2/Sun-like domain containing protein 5 7354421
dme mtTFB1 Mitochondrial Transcription Factor B1 8674019
cel nsun-4 SAM_MT_RSMB_NOP domain-containing protein 171790
cel nath-10 RNA cytidine acetyltransferase 172182 IEA
cel nola-3 Putative H/ACA ribonucleoprotein complex subunit 3 172883
cel nsun-1 SAM_MT_RSMB_NOP domain-containing protein 173437
cel K07E8.7 Pseudouridine synthase 173456
cel F33A8.4 Uncharacterized protein 174691
cel nsun-5 28S rRNA (cytosine-C(5))-methyltransferase 175153
cel H06I04.3 Putative rRNA methyltransferase 175414
cel C27F2.4 Uncharacterized protein 175671
cel C06E1.9 Uncharacterized protein 176206
cel Y39A1A.14 Ribosomal RNA small subunit methyltransferase nep-1 176488
cel K01G5.5 Putative H/ACA ribonucleoprotein complex subunit 4 176504
cel Y48A6B.3 Putative H/ACA ribonucleoprotein complex subunit 2-like protein 176531
cel Y66H1A.4 putative H/ACA ribonucleoprotein complex subunit 1-like protein 176870
cel F52C12.2 18S rRNA aminocarboxypropyltransferase 176995
cel fib-1 rRNA 2'-O-methyltransferase fibrillarin 179999
cel C04H5.1 Multifunctional methyltransferase subunit TRM112-like protein 182240
cel E02H1.1 putative dimethyladenosine transferase 183993 IEA
cel F45G2.9 rRNA methyltransferase 2, mitochondrial 185813
cel tfbm-1 Dimethyladenosine transferase 1, mitochondrial 188022 IEA
cel mett-10 U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase 191526
sce SPB1 27S pre-rRNA (guanosine2922-2'-O)-methyltransferase 850304
sce BUD23 18S rRNA (guanine1575-N7)-methyltransferase 850414
sce BMT6 25S rRNA (uracil2843-N3)-methyltransferase 850752
sce PUS5 pseudouridine synthase PUS5 850862 IMP
sce CBF5 pseudouridine synthase CBF5 850872
sce EMG1 18S rRNA pseudouridine methyltransferase 850883
sce NOP56 snoRNP complex protein NOP56 850894 TAS
sce NHP2 snoRNA-binding protein NHP2 851319
sce PUS9 pseudouridine synthase PUS9 851525
sce NOP1 rRNA methyltransferase NOP1 851548
sce RRP8 25S rRNA (adenine645-N1)-methyltransferase 851656
sce BMT2 25S rRNA (adenine2142-N1)-methyltransferase 852438
sce MRM2 21S rRNA (uridine2791-2'-O) methyltransferase 852741
sce PUS6 pseudouridine synthase PUS6 853079
sce RIB2 bifunctional DRAP deaminase/tRNA pseudouridine synthase RIB2 854088
sce TSR3 ribosome biogenesis protein TSR3 854167
sce MRM1 Mrm1p 854376 IDA
sce PUS7 pseudouridine synthase PUS7 854417
sce BMT5 25S rRNA (uracil2634-N3)-methyltransferase 854711
sce YMR265C uncharacterized protein 855307
sce KRE33 ribosome biosynthesis protein KRE33 855591 IEA
sce NOP2 rRNA (cytosine-C5-)-methyltransferase NOP2 855664
sce RCM1 rRNA (cytosine-C5-)-methyltransferase RCM1 855709
sce TRM112 RNA methylation protein TRM112 855782
sce DIM1 putative dimethyladenosine transferase 855862 IEA,IMP
sce CIC1 Cic1p 856449
sce NOP10 snoRNP complex protein NOP10 856471
sce GAR1 H/ACA snoRNP pseudouridylase subunit GAR1 856489
sce SNR18 9164867
sce SNR56 9164868
sce SNR161 9164869
sce SNR65 9164872
sce SNR189 9164873
sce SNR33 9164874
sce SNR43 9164875
sce SNR63 9164876
sce SNR47 9164877
sce SNR13 9164878
sce SNR84 9164879
sce SNR67 9164880
sce SNR53 9164881
sce SNR4 9164882
sce SNR80 9164883
sce SNR52 9164886
sce SNR32 9164901
sce SNR71 9164902
sce SNR68 9164907
sce SNR37 9164908
sce SNR128 9164909
sce SNR60 9164911
sce SNR3 9164912
sce SNR38 9164913
sce SNR69 9164914
sce SNR42 9164915
sce SNR87 9164916
sce SNR64 9164917
sce SNR34 9164927
sce SNR79 9164937
sce SNR55 9164944
sce SNR57 9164947
sce SNR61 9164949
sce SNR44 9164950
sce SNR11 9164951
sce SNR24 9164952
sce SNR72 9164953
sce SNR77 9164954
sce SNR83 9164955
sce SNR75 9164956
sce SNR85 9164957
sce SNR78 9164958
sce SNR86 9164959
sce SNR54 9164960
sce SNR76 9164962
sce SNR73 9164963
sce SNR74 9164964
sce SNR49 9164966
sce SNR66 9164968
sce SNR40 9164969
sce SNR191 9164970
sce SNR8 9164971
sce SNR36 9164972
sce SNR81 9164973
sce SNR9 9164974
sce SNR50 9164975
sce SNR58 9164976
sce SNR35 9164977
sce SNR62 9164978
sce SNR31 9164979
sce SNR5 9164980
sce SNR45 9164982
sce SNR51 9164983
sce SNR70 9164984
sce SNR41 9164986
sce SNR59 9164987
spo SPCC1919.13c putative ribosome biogenesis protein 2539319
spo SPBC1347.13c putative ribose methyltransferase 2539800
spo SPBC336.02 putative SSU rRNA dimethylase 2540247
spo mrm2 putative 2' O-ribose methyltransferase Mrm2 2540444
spo fib1 fibrillarin 2540479
spo SPBC1A4.09 putative pseudouridine synthase 2540668
spo gar1 H/ACA snoRNP pseudouridylase subunit Gar1 2540705
spo SPBC4.02c hypothetical protein 2541076
spo SPBP8B7.20c putative RNA methyltransferase Nop2 2541274
spo trm112 putative protein and tRNA methyltransferase regulatory subunit Trm112 2541708
spo spb1 putative rRNA methyltransferase Spb1 2542112
spo mra1 ribosome biogenesis protein Mra1 2542139
spo tsr3 putative SSU-rRNA maturation protein Tsr3 2542142
spo SPAC27D7.08c hypothetical protein 2542223
spo nhp2 box H/ACA snoRNP complex subunit Nhp2 2542369
spo cbf5 putative pseudouridylate synthase Cbf5 2542481
spo SPAC20G8.09c putative ribosome biogenesis ATPase 2542520
spo SPAC18B11.02c putative tRNA pseudouridylate synthase 2542607
spo SPAC2C4.06c putative rRNA methyltransferase 2542630
spo nop10 putative snoRNP complex protein 2542636
spo SPAC26A3.06 S-adenosylmethionine-dependent methyltransferase 2542685
spo rrp8 putative rRNA methyltransferase Rrp8 2543219
spo SPAC630.10 hypothetical protein 2543414


The preparation time of this page was 0.3 [sec].