COXPRESdb : GeneID search result

[←][→] mmu Hdgf Gene

functional annotation

Function

heparin binding growth factor

GO BP

GO:0098761 [list] [network] cellular response to interleukin-7	(17 genes)	IDA
GO:0034504 [list] [network] protein localization to nucleus	(184 genes)	ISO
GO:0000122 [list] [network] negative regulation of transcription by RNA polymerase II	(948 genes)	ISO
GO:0045944 [list] [network] positive regulation of transcription by RNA polymerase II	(1250 genes)	ISO
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II	(2471 genes)	IBA
GO:0009987 [list] [network] cellular process	(15720 genes)	IDA

GO CC

GO:0017053 [list] [network] transcription repressor complex	(63 genes)	ISO
GO:0005615 [list] [network] extracellular space	(2015 genes)	IDA ISO
GO:0005576 [list] [network] extracellular region	(2754 genes)	IEA
GO:0005654 [list] [network] nucleoplasm	(3580 genes)	ISO
GO:0005634 [list] [network] nucleus	(7226 genes)	IBA IDA ISO
GO:0005737 [list] [network] cytoplasm	(11434 genes)	ISO

GO MF

GO:0001222 [list] [network] transcription corepressor binding	(36 genes)	ISO
GO:0008083 [list] [network] growth factor activity	(148 genes)	ISO
GO:0008201 [list] [network] heparin binding	(169 genes)	IEA
GO:0003714 [list] [network] transcription corepressor activity	(186 genes)	ISO
GO:0001227 [list] [network] DNA-binding transcription repressor activity, RNA polymerase II-specific	(328 genes)	ISO
GO:0015631 [list] [network] tubulin binding	(379 genes)	ISO
GO:0003779 [list] [network] actin binding	(443 genes)	ISO
GO:0003712 [list] [network] transcription coregulator activity	(480 genes)	IBA
GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding	(1148 genes)	ISO
GO:0003690 [list] [network] double-stranded DNA binding	(1605 genes)	IBA
GO:0000166 [list] [network] nucleotide binding	(2052 genes)	IEA
GO:0003677 [list] [network] DNA binding	(2338 genes)	IEA
GO:0005515 [list] [network] protein binding	(9507 genes)	IPI

KEGG

Protein

NP_001317980.1 NP_001317981.1 NP_032257.3 XP_006501092.1 XP_030108295.1 XP_030108296.1

BLAST

NP_001317980.1 NP_001317981.1 NP_032257.3 XP_006501092.1 XP_030108295.1 XP_030108296.1

Orthologous

[Ortholog page] HDGF (hsa) PSIP1 (hsa) Hdgfl1 (mmu) Hdgfl2 (mmu) Hdgfl3 (mmu) CG9926 (dme) Jasper (dme) HDGFL3 (hsa) hdgfl2 (dre) HDGFL2 (hsa) Psip1 (mmu) Hdgf (rno) HDGFL1 (hsa) Hdgfl2 (rno) Hdgfl1 (rno) C06A5.3 (cel) Hdgfl3 (rno) Psip1 (rno) HDGFRP3 (gga) PSIP1 (gga) PSIP1 (cfa) HDGFL3 (cfa) HDGFL2 (cfa) PSIP1 (fca) hdgfl3 (dre) psip1a (dre) HDGFL1 (cfa) PSIP1 (mcc) HDGFL2 (mcc) HDGFL1 (mcc) HDGF (mcc) HDGFL3 (mcc) HDGFRP2 (gga) HDGF (gga) rpl2802 (spo) rpl2801 (spo) HDGF (cfa) HDGFL2 (fca) HDGF (fca) HDGFL3 (fca) HDGFL1 (fca) LOC119881650 (cfa)

Subcellular
localization
wolf

nucl 9, cyto_nucl 5	(predict for NP_001317980.1)
nucl 8, cyto 2	(predict for NP_001317981.1)
nucl 8, mito 1	(predict for NP_032257.3)
nucl 8, cyto 2	(predict for XP_006501092.1)
nucl 9, cyto_nucl 5	(predict for XP_030108295.1)
nucl 9, cyto_nucl 5	(predict for XP_030108296.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mmu05207	Chemical carcinogenesis - receptor activation	2
mmu05166	Human T-cell leukemia virus 1 infection	2
mmu05203	Viral carcinogenesis	2

Genes directly connected with Hdgf on the network
coex z^*	Locus	Function^*	Coexpression detail	CoexPub	Entrez Gene ID^*
8.4	Pa2g4	proliferation-associated 2G4	[detail]	1	18813
7.7	Set	SET nuclear oncogene	[detail]	0	56086
7.4	Kmt5a	lysine methyltransferase 5A	[detail]	0	67956
6.6	Ube2r2	ubiquitin-conjugating enzyme E2R 2	[detail]	0	67615
6.5	Ubqln4	ubiquilin 4	[detail]	0	94232

Coexpressed
gene list

[Coexpressed gene list for Hdgf]

Gene expression

All samples

[Expression pattern for all samples]

Tissue specificity^*

Link to other DBs
Entrez Gene ID	15191
Refseq ID (protein)	NP_001317980.1
	NP_001317981.1
	NP_032257.3
	XP_006501092.1
	XP_030108295.1
	XP_030108296.1

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