[←][→] mmu  U2af1 Gene
functional annotation
Function   U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1  
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (209 genes)  IBA  
GO:0008380 [list] [network] RNA splicing  (331 genes)  IEA  
GO:0006397 [list] [network] mRNA processing  (415 genes)  IEA  
GO CC
GO:0089701 [list] [network] U2AF complex  (5 genes)  IBA ISO  
GO:0071013 [list] [network] catalytic step 2 spliceosome  (95 genes)  ISO  
GO:0005681 [list] [network] spliceosomal complex  (206 genes)  IBA ISO  
GO:0016607 [list] [network] nuclear speck  (342 genes)  IDA  
GO:0005654 [list] [network] nucleoplasm  (3580 genes)  ISO  
GO:0005634 [list] [network] nucleus  (7226 genes)  IEA  
GO MF
GO:0050733 [list] [network] RS domain binding  (6 genes)  IPI  
GO:0030628 [list] [network] pre-mRNA 3'-splice site binding  (7 genes)  IBA  
GO:0003723 [list] [network] RNA binding  (1194 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (3446 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3573 genes)  IEA  
GO:0005515 [list] [network] protein binding  (9507 genes)  IPI  
KEGG mmu03040 [list] [network] Spliceosome (134 genes)
Protein NP_001157241.1  NP_001344836.1  NP_077149.2  XP_006523535.1  XP_030105304.1 
BLAST NP_001157241.1  NP_001344836.1  NP_077149.2  XP_006523535.1  XP_030105304.1 
Orthologous [Ortholog page] U2AF1 (hsa)  U2af38 (dme)  uaf-2 (cel)  u2af1 (dre)  U2af1l4 (mmu)  U2af1l4 (rno)  U2AF1 (gga)  U2AF1L4 (cfa)  U2AF1 (cfa)  U2af1 (rno)  U2AF1L4 (mcc)  U2AF1 (mcc)  esf2 (spo)  U2AF1 (fca)  U2AF1L4 (fca)  U2AF1L5 (hsa) 
Subcellular
localization
wolf
nucl 6,  cyto_nucl 4,  extr 3,  cyto 2  (predict for NP_001157241.1)
nucl 6,  cyto_nucl 4,  extr 3,  cyto 1  (predict for NP_001344836.1)
nucl 6,  cyto_nucl 4,  extr 3,  cyto 2  (predict for NP_077149.2)
nucl 6,  cyto_nucl 4,  extr 3,  cyto 1  (predict for XP_006523535.1)
nucl 6,  cyto_nucl 4,  extr 3,  cyto 1  (predict for XP_030105304.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mmu03040 Spliceosome 6
mmu03008 Ribosome biogenesis in eukaryotes 2
mmu03015 mRNA surveillance pathway 2
mmu05014 Amyotrophic lateral sclerosis 2
mmu05022 Pathways of neurodegeneration - multiple diseases 2
Genes directly connected with U2af1 on the network
coex z* Locus Function* Coexpression
detail		 CoexPub Entrez Gene ID*
11.2 Prmt1 protein arginine N-methyltransferase 1 [detail] 0 15469
10.9 Rbm8a RNA binding motif protein 8a [detail] 0 60365
9.5 Gar1 GAR1 ribonucleoprotein [detail] 0 68147
Coexpressed
gene list		 [Coexpressed gene list for U2af1]
Gene expression
All samples [Expression pattern for all samples]
Tissue specificity* tissue specificity
Link to other DBs
Entrez Gene ID 108121      
Refseq ID (protein) NP_001157241.1 
NP_001344836.1 
NP_077149.2 
XP_006523535.1 
XP_030105304.1 


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