Help

Tutorial Movie

• Tutorial Movie (Japanese only so far)

Tutorials

• Example 1; functional estimation of a gene. (ACTR3)
• Example 2; making gene lists for a particular biological function. (virus response)

Documents

Presentation documents (English)

• 2009-07-29: COXPRESdb_Introduction.pdf (English, oral) (IUPS2009, Kyoto)
• 2009-07-29: COXPRESdb_Tutorial.pdf (English, oral) (IUPS2009, Kyoto)
• 2010-12-01: COXPRESdb.pdf (English, poster) (AYRCOB2010, Singapore)

Presentation documents (Japanese)

• 2009-08-26: COXPRESdb_ver4-0.pdf (Japanese, oral) (Transportsome meeting, Kumamoto)
• 2010-11-27: Functional_ortholog.pdf (Japanese, poster) (Q-bio, Tokyo)

Terms

• Terms in COXPRESdbx

FAQ

• FAQ
• API
• RDF

License

• License

About us

• About us

Calculation detail

Coexpression (ver.2)

• Source of gene expression data
  Human (GPL570); 123 experiments released by NCBI GEO
  Mouse (GPL1261); 154 experiments released by NCBI GEO
  Rat (GPL1355); 154 experiments released by NCBI GEO
• Calculation
• Rank and Mutual Rank
• Supportability
• Platform Evaluation

Coexpressed gene network

• Gene selections for coexpressed gene networks
• Coexpressed gene network

Coexpressed gene search from multi-gene query

• Coexpressed gene search from multi-gene query