COXPRESdb

ver. 7.0

last update; Aug. 24. 2018

Download subcellular localization predicted by WoLF PSORT

COXPRESdb version Normalized output for COXPRESdb Original output of WoLF PSORT
ver.3.3 ver3-3.WoLF.Hsa.norm
ver3-3.WoLF.Mmu.norm
ver3-3.WoLF.Rno.norm
ver3-3.WoLF.Hsa
ver3-3.WoLF.Mmu
ver3-3.WoLF.Rno

Data format (Normalized output for COXPRESdb)

Example
XP_001129666.1    cyto 6
NP_037539.1     cyto 4, cysk 3, cyto_nucl 3
NP_057487.2     nucl 8
NP_127494.1     nucl 4, cyto_nucl 4, cyto 3
NP_001014834.1  nucl 3, cyto_nucl 3, cyto 2
To simplify original WoLF PSORT output, we applied following treatment.

Data format (Original output of WoLF PSORT)

Example
# k used for kNN is: 32
XP_001129666.1 cyto 21, extr 4, pero 3, nucl 2, cysk 2, extr_plas 2
NP_037539.1 cyto 13, cysk 12, cyto_nucl 10, nucl 5
NP_057487.2 nucl 26, extr 2, cyto 2
NP_127494.1 nucl 14.5, cyto_nucl 14, cyto 12.5, pero 2
See also web page of WoLF PSORT.