GO:0031492 nucleosomal DNA binding
| 40 hsa genes in this database. | |
| 19 mmu genes in this database. | |
| 23 rno genes in this database. | |
| 13 gga genes in this database. | |
| 24 dre genes in this database. | |
| 29 dme genes in this database. | |
| 7 cel genes in this database. | |
| 1 cfa genes in this database. | |
| 4 sce genes in this database. |
[QuickGO]
term: nucleosomal DNA binding
goid: GO:0031492
Shaded genes do not have GeneChip data. The output was limited up to 100 for each of species.
| Species | Symbol | Gene coexpression |
Locus page |
Full name* | Entrez Gene ID | Evidence* |
|---|---|---|---|---|---|---|
| hsa | ACTB |  |
 |
actin beta | 60 | HDA |
| hsa | ACTL6A | |
|
actin like 6A | 86 | HDA |
| hsa | RCC1 | |
|
regulator of chromosome condensation 1 | 1104 | IDA |
| hsa | CHD4 | |
|
chromodomain helicase DNA binding protein 4 | 1108 | HDA |
| hsa | H1-0 | |
|
H1.0 linker histone | 3005 | IBA |
| hsa | H1-2 | |
|
H1.2 linker histone, cluster member | 3006 | IBA |
| hsa | H1-3 | |
|
H1.3 linker histone, cluster member | 3007 | IBA |
| hsa | H1-4 | |
|
H1.4 linker histone, cluster member | 3008 | IBA |
| hsa | H1-5 | |
|
H1.5 linker histone, cluster member | 3009 | IBA |
| hsa | H1-6 | |
|
H1.6 linker histone, cluster member | 3010 | IBA |
| hsa | H2AZ1 | |
|
H2A.Z variant histone 1 | 3015 | IDA |
| hsa | H3-3A | |
|
H3.3 histone A | 3020 | IDA |
| hsa | H3-3B | |
|
H3.3 histone B | 3021 | IDA |
| hsa | H1-1 | |
|
H1.1 linker histone, cluster member | 3024 | IBA |
| hsa | HDAC1 | |
|
histone deacetylase 1 | 3065 | HDA |
| hsa | HDAC2 | |
|
histone deacetylase 2 | 3066 | HDA |
| hsa | HMGN1 | |
|
high mobility group nucleosome binding domain 1 | 3150 | IEA |
| hsa | HMGN2 | |
|
high mobility group nucleosomal binding domain 2 | 3151 | IEA |
| hsa | HNRNPC | |
|
heterogeneous nuclear ribonucleoprotein C | 3183 | HDA |
| hsa | RBBP4 | |
|
RB binding protein 4, chromatin remodeling factor | 5928 | HDA |
| hsa | SMARCA4 | |
|
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 | 6597 | HDA |
| hsa | SMARCB1 | |
|
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 | 6598 | HDA |
| hsa | SMARCC1 | |
|
SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 | 6599 | HDA |
| hsa | SMARCC2 | |
|
SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2 | 6601 | HDA |
| hsa | SMARCD2 | |
|
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 | 6603 | HDA |
| hsa | SMARCE1 | |
|
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 | 6605 | HDA |
| hsa | HMGA2 | |
|
high mobility group AT-hook 2 | 8091 | IDA |
| hsa | MBD2 | |
|
methyl-CpG binding domain protein 2 | 8932 | HDA |
| hsa | H1-10 | |
|
H1.10 linker histone | 8971 | IBA |
| hsa | MTA2 | |
|
metastasis associated 1 family member 2 | 9219 | HDA |
| hsa | HMGN3 | |
|
high mobility group nucleosomal binding domain 3 | 9324 | IEA |
| hsa | MACROH2A1 | |
|
macroH2A.1 histone | 9555 | IDA,ISS |
| hsa | HMGN4 | |
|
high mobility group nucleosomal binding domain 4 | 10473 | IEA |
| hsa | MBD3 | |
|
methyl-CpG binding domain protein 3 | 53615 | HDA |
| hsa | GATAD2B | |
|
GATA zinc finger domain containing 2B | 57459 | HDA |
| hsa | HMGN5 | |
|
high mobility group nucleosome binding domain 5 | 79366 | IEA |
| hsa | H1-8 | |
|
H1.8 linker histone | 132243 | IBA,ISS |
| hsa | H1-9P | |
|
H1.9 linker histone, pseudogene | 373861 | IBA |
| hsa | H3Y1 | |
|
H3.Y histone 1 | 391769 | IDA |
| hsa | H3-5 | |
|
H3.5 histone | 440093 | IDA |
| mmu | H1f3 | |
|
H1.3 linker histone, cluster member | 14957 | IBA |
| mmu | H1f0 | |
|
H1.0 linker histone | 14958 | IBA |
| mmu | H3f3a | |
|
H3.3 histone A | 15078 | ISO |
| mmu | H3f3b | |
|
H3.3 histone B | 15081 | ISO |
| mmu | Hmgn1 | |
|
high mobility group nucleosomal binding domain 1 | 15312 | IEA |
| mmu | Hmga2 | |
|
high mobility group AT-hook 2 | 15364 | ISO |
| mmu | Macroh2a1 | |
|
macroH2A.1 histone | 26914 | IDA,ISO |
| mmu | H1f2 | |
|
H1.2 linker histone, cluster member | 50708 | IBA |
| mmu | H1f4 | |
|
H1.4 linker histone, cluster member | 50709 | IBA |
| mmu | Hmgn5 | |
|
high-mobility group nucleosome binding domain 5 | 50887 | IEA |
| mmu | H2az1 | |
|
H2A.Z variant histone 1 | 51788 | ISO |
| mmu | H1f9 | |
|
H1.9 linker histone | 54388 | IBA |
| mmu | H1f5 | |
|
H1.5 linker histone, cluster member | 56702 | IBA |
| mmu | H1f1 | |
|
H1.1 linker histone, cluster member | 80838 | IBA |
| mmu | Hmgn3 | |
|
high mobility group nucleosomal binding domain 3 | 94353 | IEA |
| mmu | Rcc1 | |
|
regulator of chromosome condensation 1 | 100088 | ISO |
| mmu | H1f6 | |
|
H1.6 linker histone, cluster member | 107970 | IBA |
| mmu | H1f8 | |
|
H1.8 linker histone | 171506 | IBA,IDA |
| mmu | H1f10 | |
|
H1.10 linker histone | 243529 | IBA |
| rno | H1f0 | |
|
H1.0 linker histone | 24437 | IBA |
| rno | H1f6 | |
|
H1.6 linker histone, cluster member | 24438 | IBA |
| rno | Macroh2a1 | |
|
macroH2A.1 histone | 29384 | ISO |
| rno | H2az1 | |
|
H2A.Z variant histone 1 | 58940 | ISO |
| rno | Hmga2 | |
|
high mobility group AT-hook 2 | 84017 | ISO,ISS |
| rno | Hmgn3 | |
|
high mobility group nucleosomal binding domain 3 | 113990 | IEA |
| rno | Hmgn2 | |
|
high mobility group nucleosomal binding domain 2 | 114637 | IEA |
| rno | H3f3b | |
|
H3.3 histone B | 117056 | ISO |
| rno | H1f1 | |
|
H1.1 linker histone, cluster member | 291145 | IBA |
| rno | Hmgn1 | |
|
high mobility group nucleosome binding domain 1 | 360704 | IEA |
| rno | H1f10 | |
|
H1.10 linker histone | 500252 | IBA |
| rno | H1f8 | |
H1.8 linker histone | 502875 | IBA,ISO,ISS | |
| rno | H1f5 | |
|
H1.5 linker histone, cluster member | 680522 | IBA |
| rno | Hmgn5b | |
|
high mobility group nucleosome binding domain 5B | 681284 | IEA |
| rno | Rcc1 | |
|
regulator of chromosome condensation 1 | 682908 | ISO |
| rno | H4f3 | |
|
H1.3 linker histone, cluster member | 684828 | IBA |
| rno | Hils1 | |
|
histone linker H1 domain, spermatid-specific 1 | 690026 | IBA |
| rno | Hmgn4 | |
high mobility group nucleosomal binding domain 4 | 100359546 | IEA | |
| rno | LOC100360316 | |
hypothetical protein LOC100360316 | 100360316 | IEA | |
| rno | LOC100361388 | |
high-mobility group nucleosomal binding domain 2-like | 100361388 | IEA | |
| rno | H3f3a | |
|
H3.3 histone A | 100361558 | ISO |
| rno | LOC100363319 | |
high mobility group nucleosomal binding domain 2 | 100363319 | IEA | |
| rno | Hmgn5 | |
high mobility group nucleosome binding domain 5 | 100910616 | IEA | |
| gga | H2AFY | |
|
H2A histone family, member Y | 395858 | IEA |
| gga | HMGN1 | |
|
high mobility group nucleosome binding domain 1 | 395999 | IEA |
| gga | HIST1H110 | |
|
histone cluster 1, H1.10 (similar to human histone cluster 1, class H1 genes) | 417948 | IBA |
| gga | HIST1H101 | |
|
histone cluster 1, H1.01 (similar to human histone cluster 1, class H1 genes) | 417954 | IBA |
| gga | HMGN2P46 | |
|
high mobility group nucleosomal binding domain 2 pseudogene 46 | 421853 | IEA |
| gga | HMGN5 | |
|
high mobility group nucleosome binding domain 5 | 422278 | IEA |
| gga | H2AFZ | |
|
H2A histone family, member Z | 426361 | IEA |
| gga | LOC427882 | |
|
histone H1 | 427882 | IBA |
| gga | HIST1H111L | |
|
histone cluster 1, H1.11L (similar to human histone cluster 1, class H1 genes) | 427892 | IBA |
| gga | HIST1H111R | |
|
histone cluster 1, H1.11R (similar to human histone cluster 1, class H1 genes) | 427896 | IBA |
| gga | H1F0 | |
|
H1 histone family, member 0 | 693250 | IBA,IMP |
| gga | HMGN4 | |
|
high mobility group nucleosomal binding domain 4 | 768675 | IEA |
| gga | HIST1H103 | |
|
histone cluster 1, H1.03 (similar to human histone cluster 1, class H1 genes) | 100858354 | IBA |
| dre | h1-0 | |
|
H1.0 linker histone | 321618 | IBA |
| dre | h1-10 | |
|
H1.10 linker histone | 322508 | IBA |
| dre | h1m | |
|
linker histone H1M | 327403 | IBA |
| dre | hmgn3 | |
|
high mobility group nucleosomal binding domain 3 | 492345 | IEA |
| dre | histh1l1 | |
|
histone H1 like1 | 550353 | IBA |
| dre | zgc:110425 | |
|
zgc:110425 | 553782 | IBA |
| dre | si:ch73-1a9.3 | |
|
si:ch73-1a9.3 | 556254 | IEA |
| dre | si:ch211-103n10.5 | |
|
si:ch211-103n10.5 | 559526 | IBA |
| dre | si:dkey-261m9.12 | |
|
si:dkey-261m9.12 | 560910 | IBA |
| dre | si:ch73-281n10.2 | |
|
si:ch73-281n10.2 | 561719 | IEA |
| dre | si:ch73-368j24.11 | |
|
si:ch73-368j24.11 | 562307 | IBA |
| dre | hmgn7 | |
|
high mobility group nucleosomal binding domain 7 | 567263 | IEA |
| dre | hmgn2 | |
|
high mobility group nucleosomal binding domain 2 | 569904 | IEA |
| dre | si:dkey-23a13.17 | |
|
si:dkey-23a13.17 | 571135 | IBA |
| dre | si:ch211-113a14.24 | |
|
si:ch211-113a14.24 | 573073 | IBA |
| dre | zgc:153405 | |
|
zgc:153405 | 751661 | IBA |
| dre | si:ch211-113a14.18 | |
|
si:ch211-113a14.18 | 792275 | IBA |
| dre | si:dkey-23a13.9 | |
|
si:dkey-23a13.9 | 100004336 | IBA |
| dre | hmgn6 | |
|
high mobility group nucleosome binding domain 6 | 100151347 | IEA |
| dre | si:dkey-108k21.21 | |
|
si:dkey-108k21.21 | 100332815 | IBA |
| dre | si:dkey-108k21.10 | |
|
si:dkey-108k21.10 | 100333275 | IBA |
| dre | histh1l3 | |
|
histone H1 like 3 | 100334868 | IBA |
| dre | si:ch73-368j24.12 | |
|
si:ch73-368j24.12 | 100537402 | IBA |
| dre | histh1l2 | |
|
histone H1 like 2 | 103911343 | IBA |
| dme | Ssrp | |
|
Structure specific recognition protein | 37767 | IDA |
| dme | BigH1 | |
|
Histone H1 variant BigH1 | 41780 | IBA |
| dme | His3:CG31613 | |
histone H3 | 318847 | ISS | |
| dme | His3:CG33836 | |
histone H3 | 3771723 | ISS | |
| dme | His3:CG33842 | |
histone H3 | 3771729 | ISS | |
| dme | His1:CG33807 | |
histone H1 | 3771734 | IBA | |
| dme | His3:CG33815 | |
histone H3 | 3771771 | ISS | |
| dme | His3:CG33830 | |
histone H3 | 3771792 | ISS | |
| dme | His1:CG33834 | |
histone H1 | 3771911 | IBA | |
| dme | His3:CG33806 | |
histone H3 | 3771959 | ISS | |
| dme | His1:CG33855 | |
histone H1 | 3771991 | IBA | |
| dme | His3:CG33839 | |
histone H3 | 3772032 | ISS | |
| dme | His1:CG33801 | |
|
histone H1 | 3772056 | IBA |
| dme | His3:CG33803 | |
histone H3 | 3772149 | ISS | |
| dme | His3:CG33809 | |
histone H3 | 3772163 | ISS | |
| dme | His3:CG33863 | |
histone H3 | 3772173 | ISS | |
| dme | His3:CG33866 | |
histone H3 | 3772189 | ISS | |
| dme | His3:CG33854 | |
histone H3 | 3772191 | ISS | |
| dme | His3:CG33818 | |
histone H3 | 3772198 | ISS | |
| dme | His3:CG33857 | |
histone H3 | 3772231 | ISS | |
| dme | His3:CG33821 | |
histone H3 | 3772370 | ISS | |
| dme | His3:CG33824 | |
histone H3 | 3772374 | ISS | |
| dme | His3:CG33845 | |
histone H3 | 3772421 | ISS | |
| dme | His3:CG33812 | |
histone H3 | 3772489 | ISS | |
| dme | His3:CG33860 | |
histone H3 | 3772517 | ISS | |
| dme | His3:CG33851 | |
histone H3 | 3772518 | ISS | |
| dme | His3:CG33833 | |
histone H3 | 3772552 | ISS | |
| dme | His3:CG33827 | |
histone H3 | 3772607 | ISS | |
| dme | His3:CG33848 | |
histone H3 | 3772619 | ISS | |
| cel | hil-5 | |
|
Histone H1.5 | 172242 | IBA |
| cel | hil-2 | |
|
Histone H1.2 | 177390 | IBA |
| cel | hil-4 | |
|
Histone H1.4 | 178866 | IBA |
| cel | hil-1 | |
|
Histone H1.X | 179993 | IBA |
| cel | hil-3 | |
|
Histone H1.3 | 181073 | IBA |
| cel | his-24 | |
|
Histone 24 | 181545 | IBA |
| cel | hil-6 | |
|
Putative histone H1.6 | 186584 | IBA |
| cfa | HMGN2 | |
|
high mobility group nucleosomal binding domain 2 | 403686 | IEA |
| sce | DPB4 | |
|
DNA polymerase epsilon noncatalytic subunit | 851699 | IDA |
| sce | SNF2 | |
|
SWI/SNF catalytic subunit SNF2 | 854465 | IDA |
| sce | RAP1 | |
|
DNA-binding transcription factor RAP1 | 855505 | IDA |
| sce | HHO1 | |
|
histone H1 | 855976 | IBA |
