GO:0006379 mRNA cleavage
| 25 hsa genes in this database. | |
| 20 mmu genes in this database. | |
| 22 rno genes in this database. | |
| 3 gga genes in this database. | |
| 19 dre genes in this database. | |
| 8 dme genes in this database. | |
| 10 cel genes in this database. | |
| 21 sce genes in this database. | |
| 24 spo genes in this database. |
[QuickGO]
term: mRNA cleavage
goid: GO:0006379
Shaded genes do not have GeneChip data. The output was limited up to 100 for each of species.
| Species | Symbol | Gene coexpression |
Locus page |
Full name* | Entrez Gene ID | Evidence* |
|---|---|---|---|---|---|---|
| hsa | CSTF2 |  |
 |
cleavage stimulation factor subunit 2 | 1478 | |
| hsa | CSTF3 | |
|
cleavage stimulation factor subunit 3 | 1479 | TAS |
| hsa | ERN1 | |
|
endoplasmic reticulum to nucleus signaling 1 | 2081 | ISS |
| hsa | MOV10 | |
|
Mov10 RISC complex RNA helicase | 4343 | |
| hsa | NCBP1 | |
|
nuclear cap binding protein subunit 1 | 4686 | |
| hsa | POLR2I | |
|
RNA polymerase II subunit I | 5438 | IEA |
| hsa | RNASE4 | |
|
ribonuclease A family member 4 | 6038 | NAS |
| hsa | CPSF4 | |
|
cleavage and polyadenylation specific factor 4 | 10898 | |
| hsa | NUDT21 | |
|
nudix hydrolase 21 | 11051 | |
| hsa | CPSF6 | |
|
cleavage and polyadenylation specific factor 6 | 11052 | |
| hsa | NCBP2 | |
|
nuclear cap binding protein subunit 2 | 22916 | |
| hsa | CSTF2T | |
|
cleavage stimulation factor subunit 2 tau variant | 23283 | |
| hsa | AGO1 | |
|
argonaute RISC component 1 | 26523 | |
| hsa | AGO2 | |
|
argonaute RISC catalytic component 2 | 27161 | |
| hsa | CPSF1 | |
|
cleavage and polyadenylation specific factor 1 | 29894 | |
| hsa | POLR1H | |
|
RNA polymerase I subunit H | 30834 | IEA |
| hsa | PCF11 | |
|
PCF11 cleavage and polyadenylation factor subunit | 51585 | NAS |
| hsa | CPSF3 | |
|
cleavage and polyadenylation specific factor 3 | 51692 | TAS |
| hsa | CPSF2 | |
|
cleavage and polyadenylation specific factor 2 | 53981 | |
| hsa | TUT1 | |
|
terminal uridylyl transferase 1, U6 snRNA-specific | 64852 | |
| hsa | CPSF7 | |
|
cleavage and polyadenylation specific factor 7 | 79869 | |
| hsa | FIP1L1 | |
|
factor interacting with PAPOLA and CPSF1 | 81608 | |
| hsa | AGO3 | |
|
argonaute RISC catalytic component 3 | 192669 | |
| hsa | AGO4 | |
|
argonaute RISC component 4 | 192670 | |
| hsa | CPSF4L | |
|
cleavage and polyadenylation specific factor 4 like | 642843 | |
| mmu | Mov10 | |
|
Mov10 RISC complex RNA helicase | 17454 | |
| mmu | Cpsf2 | |
|
cleavage and polyadenylation specific factor 2 | 51786 | IEA |
| mmu | Cpsf4l | |
|
cleavage and polyadenylation specific factor 4-like | 52670 | |
| mmu | Cpsf4 | |
|
cleavage and polyadenylation specific factor 4 | 54188 | |
| mmu | Polr1h | |
|
RNA polymerase I subunit H | 66136 | IEA |
| mmu | Fip1l1 | |
|
FIP1 like 1 (S. cerevisiae) | 66899 | |
| mmu | Ncbp2 | |
|
nuclear cap binding protein subunit 2 | 68092 | |
| mmu | Nudt21 | |
|
nudix (nucleoside diphosphate linked moiety X)-type motif 21 | 68219 | ISO |
| mmu | Polr2i | |
|
polymerase (RNA) II (DNA directed) polypeptide I | 69920 | IEA |
| mmu | Tut1 | |
|
terminal uridylyl transferase 1, U6 snRNA-specific | 70044 | |
| mmu | Ern1 | |
|
endoplasmic reticulum (ER) to nucleus signalling 1 | 78943 | IDA |
| mmu | Cstf2t | |
|
cleavage stimulation factor, 3' pre-RNA subunit 2, tau | 83410 | |
| mmu | Cstf2 | |
|
cleavage stimulation factor, 3' pre-RNA subunit 2 | 108062 | |
| mmu | Ago2 | |
|
argonaute RISC catalytic subunit 2 | 239528 | |
| mmu | Cpsf7 | |
|
cleavage and polyadenylation specific factor 7 | 269061 | |
| mmu | Mir196a-1 | |
microRNA 196a-1 | 387191 | ||
| mmu | Cpsf6 | |
|
cleavage and polyadenylation specific factor 6 | 432508 | |
| mmu | Ncbp1 | |
|
nuclear cap binding protein subunit 1 | 433702 | |
| mmu | Mir196b | |
microRNA 196b | 723820 | ||
| mmu | Mir196a-2 | |
microRNA 196a-2 | 723958 | ||
| rno | Ago2 | |
|
argonaute RISC catalytic component 2 | 59117 | |
| rno | Fip1l1 | |
|
factor interacting with PAPOLA and CPSF1 | 289582 | |
| rno | Nudt21 | |
|
nudix hydrolase 21 | 291877 | |
| rno | Polr2i | |
|
RNA polymerase II subunit I | 292778 | IEA |
| rno | Ncbp1 | |
|
nuclear cap binding protein subunit 1 | 298075 | |
| rno | Ago4 | |
|
argonaute RISC component 4 | 298533 | |
| rno | Cpsf2 | |
|
cleavage and polyadenylation specific factor 2 | 299256 | |
| rno | Cpsf6 | |
|
cleavage and polyadenylation specific factor 6 | 299811 | |
| rno | Cpsf4 | |
|
cleavage and polyadenylation specific factor 4 | 304277 | |
| rno | Cstf2t | |
|
cleavage stimulation factor subunit 2, tau variant | 309338 | |
| rno | Mov10 | |
|
Mov10 RISC complex RNA helicase | 310756 | |
| rno | Ago3 | |
|
argonaute RISC catalytic component 3 | 313593 | |
| rno | Ago1 | |
|
argonaute RISC component 1 | 313594 | |
| rno | Polr1h | |
|
RNA polymerase I subunit H | 361784 | IEA |
| rno | Cpsf7 | |
|
cleavage and polyadenylation specific factor 7 | 365407 | |
| rno | Ern1 | |
|
endoplasmic reticulum to nucleus signaling 1 | 498013 | ISO |
| rno | Tut1 | |
|
terminal uridylyl transferase 1, U6 snRNA-specific | 499314 | |
| rno | Cstf2 | |
|
cleavage stimulation factor subunit 2 | 683927 | |
| rno | Ncbp2 | |
|
nuclear cap binding protein subunit 2 | 689116 | |
| rno | Mir196a | |
microRNA 196a | 100314048 | ||
| rno | Mir196b | |
microRNA 196b | 100314164 | ||
| rno | Mir196c | |
microRNA 196c | 100314204 | ||
| gga | AGO3 | |
|
argonaute 3, RISC catalytic component | 419628 | |
| gga | MOV10 | |
|
Mov10 RISC complex RNA helicase | 419872 | |
| gga | NCBP1 | |
|
nuclear cap binding protein subunit 1 | 427379 | |
| dre | cpsf4 | |
|
cleavage and polyadenylation specific factor 4 | 30203 | |
| dre | dicer1 | |
|
dicer 1, ribonuclease type III | 324724 | |
| dre | cstf2 | |
|
cleavage stimulation factor, 3' pre-RNA, subunit 2 | 386806 | |
| dre | cpsf2 | |
|
cleavage and polyadenylation specific factor 2 | 436657 | IEA |
| dre | polr2i | |
|
RNA polymerase II subunit I | 449992 | IEA |
| dre | fip1l1b | |
|
FIP1 like 1b (S. cerevisiae) | 450021 | |
| dre | mir1-1 | |
microRNA 1-1 | 494473 | ||
| dre | polr1h | |
|
RNA polymerase I subunit H | 541428 | IEA |
| dre | mov10b.2 | |
|
Moloney leukemia virus 10b, tandem duplicate 2 | 555950 | |
| dre | mov10b.1 | |
|
Moloney leukemia virus 10b, tandem duplicate 1 | 556024 | |
| dre | fip1l1a | |
FIP1 like 1a (S. cerevisiae) | 561900 | ||
| dre | tut1 | |
|
terminal uridylyl transferase 1, U6 snRNA-specific | 564388 | |
| dre | mir196a-2 | |
microRNA 196a-2 | 574524 | ||
| dre | mir430a-5 | |
microRNA 430a-5 | 613242 | ||
| dre | mir430b-10 | |
microRNA 430b-10 | 613243 | ||
| dre | mir430c-1 | |
microRNA 430c-1 | 613244 | ||
| dre | mir196a-1 | |
microRNA 196a-1 | 100033766 | ||
| dre | mir196c | |
microRNA 196c | 100310768 | ||
| dre | mir196d | |
microRNA 196d | 100310779 | ||
| dme | Clp | |
|
Clipper | 33259 | |
| dme | AGO1 | |
|
Argonaute-1 | 36544 | |
| dme | Fip1 | |
|
Factor interacting with poly(A) polymerase 1 | 40569 | |
| dme | RpII15 | |
|
RNA polymerase II 15kD subunit | 41741 | IEA |
| dme | CstF64 | |
|
Cleavage stimulation factor 64 kD subunit | 42239 | |
| dme | RpI12 | |
|
RpI12 | 42563 | IEA |
| dme | Cpsf100 | |
|
Cleavage and polyadenylation specificity factor 100 | 43426 | |
| dme | Cpsf160 | |
|
Cleavage and polyadenylation specificity factor 160 | 44250 | |
| cel | rbm-3.1 | |
|
RRM domain-containing protein | 173070 | |
| cel | rbm-3.2 | |
|
RRM domain-containing protein | 173071 | |
| cel | R06C1.4 | |
|
RRM domain-containing protein | 173076 | |
| cel | alg-2 | |
|
Protein argonaute | 173468 | |
| cel | cpf-2 | |
|
RRM domain-containing protein | 176742 | |
| cel | csr-1 | |
|
Piwi domain-containing protein | 177591 | |
| cel | cpsf-4 | |
|
Cleavage and polyadenylation specificity factor subunit 4 | 178151 | |
| cel | fipp-1 | |
|
Fip1 domain-containing protein | 178835 | |
| cel | cpsf-2 | |
|
putative cleavage and polyadenylation specificity factor subunit 2 | 179103 | IEA |
| cel | alg-1 | |
|
Protein argonaute | 181504 | |
| sce | SEN2 | |
|
tRNA splicing endonuclease subunit SEN2 | 850795 | |
| sce | CFT2 | |
|
cleavage polyadenylation factor subunit CFT2 | 850806 | IDA,IEA |
| sce | YSH1 | |
|
cleavage polyadenylation factor subunit YSH1 | 850983 | |
| sce | PTA1 | |
|
RNA-processing protein PTA1 | 851255 | |
| sce | PCF11 | |
|
Pcf11p | 851814 | IEA |
| sce | CFT1 | |
|
cleavage/polyadenylation factor CFT1 | 851895 | |
| sce | POP8 | |
|
ribonuclease P | 852263 | IEA |
| sce | RPB9 | |
|
DNA-directed RNA polymerase II core subunit RPB9 | 852810 | IEA |
| sce | RNA15 | |
|
Rna15p | 852838 | |
| sce | PTI1 | |
|
cleavage polyadenylation factor subunit PTI1 | 853060 | |
| sce | RPA12 | |
|
DNA-directed RNA polymerase I core subunit RPA12 | 853526 | IEA |
| sce | FIP1 | |
|
cleavage polyadenylation factor subunit FIP1 | 853555 | |
| sce | IPA1 | |
|
putative polyadenylation protein | 853606 | |
| sce | CUE2 | |
|
Cue2p | 853772 | IDA |
| sce | MPE1 | |
|
cleavage polyadenylation factor subunit MPE1 | 853806 | |
| sce | HRP1 | |
|
Hrp1p | 853997 | |
| sce | CLP1 | |
|
cleavage polyadenylation factor subunit CLP1 | 854424 | |
| sce | RNA14 | |
|
cleavage polyadenylation factor subunit RNA14 | 855083 | |
| sce | PFS2 | |
|
cleavage polyadenylation factor subunit PFS2 | 855399 | |
| sce | SSU72 | |
|
RNA polymerase II subunit A C-terminal domain phosphatase | 855499 | |
| sce | YTH1 | |
|
cleavage polyadenylation factor RNA-binding subunit YTH1 | 856222 | |
| spo | rpa12 | |
|
DNA-directed RNA polymerase complex I subunit Rpa12 | 2538906 | IEA |
| spo | SPCC74.02c | |
|
cleavage and polyadenylation specificity factor complex-associated protein | 2539414 | IC |
| spo | SPCC16C4.19 | |
|
putative RNase MRP subunit | 2539536 | ISO |
| spo | cft1 | |
|
putative protein Cft1 | 2539694 | ISO |
| spo | cft2 | |
|
putative cleavage/polyadenylation factor Cft2/CPSF-73 | 2539954 | |
| spo | ctf1 | |
|
cleavage and polyadenylation specificity factor complex subunit Ctf1 | 2541018 | |
| spo | SPBC660.15 | |
|
putative cleavage factor complex subunit | 2541150 | ISO |
| spo | pop7 | |
|
putative Rnase P/MRP subunit Pop7 | 2541332 | ISO |
| spo | SPBP8B7.15c | |
|
putative RBBP6 family ubiquitin-protein ligase E3 | 2541385 | ISO |
| spo | rpb9 | |
|
DNA-directed RNA polymerase II complex subunit Rpb9 | 2541470 | IEA |
| spo | yth1 | |
|
cleavage and polyadenylation specificity factor complex subunit Yth1 | 2541506 | |
| spo | SPAC25B8.16 | |
|
putative Rnase P/MRP subunit | 2541548 | ISO |
| spo | rna14 | |
|
putative cleavage and polyadenylation specificity factor complex subunit Rna14 | 2541600 | ISS |
| spo | SPAC22G7.10 | |
|
fip1-like pre-mRNA polyadenylation factor | 2541873 | |
| spo | SPAC22H10.05c | |
|
putative cleavage and polyadenylation specificity factor complex subunit | 2541907 | ISO |
| spo | ysh1 | |
|
cleavage and polyadenylation specificity factor complex endoribonuclease subunit Ysh1 | 2542258 | IC |
| spo | SPAC824.04 | |
|
putative WD repeat protein | 2542845 | IC |
| spo | SPAC4G9.04c | |
|
putative cleavage and polyadenylation specificity factor | 2543037 | ISO |
| spo | SPAC323.08 | |
|
putative ribonuclease MRP complex subunit | 2543088 | ISO |
| spo | pfs2 | |
|
WD repeat protein Pfs2 | 2543089 | ISO |
| spo | SPAC644.16 | |
|
putative RNA-binding protein | 2543462 | |
| spo | pta1 | |
|
cleavage and polyadenylation specificity factor complex subunit Pta1 | 2543538 | ISO |
| spo | pop8 | |
|
putative RNase P and RNase MRP subunit Pop8 | 3361273 | IEA |
| spo | new2 | |
|
protein new2 | 14218184 | ISO |
